UHGV-1410072 (vOTU-158545)

Viral Genome: UHGV-1410072

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1410072
vOTU ID	vOTU-158545
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0188267
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	57.62 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9831
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	31.21
Jumbo phage	No

Genome content
Genome length (bp)	25,969
GC content	42.39%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	43
CDS density	92%
Average CDS length (bps)	553.88
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 57.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1410072_1	phrog_1233	90.5	2e-26	N/A	unknown function
eggNOG-mapper	UHGV-1410072_1	936375.HMPREF1152_1074	102.0	1.1e-26	N/A	N/A
PHROG	UHGV-1410072_2	phrog_541	96.6	1.4e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-1410072_2	476272.RUMHYD_01778	112.0	1.71e-29	N/A	N/A
PHROG	UHGV-1410072_3	phrog_544	163.0	0	major head protein	head and packaging
UniRef90	UHGV-1410072_3	UniRef90_A0A395X7A1	700.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1410072_3	1232453.BAIF02000011_gene3359	382.0	0	N/A	N/A
Pfam	UHGV-1410072_3	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1410072_3	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1410072_4	phrog_194	68.1	1.6e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-1410072_4	UniRef90_UPI001D14C9C8	189.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1410072_4	476272.RUMHYD_01775	192.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1410072_4	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-1410072_5	phrog_28802	224.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1410072_5	476272.RUMHYD_01772	198.0	0	N/A	N/A
PHROG	UHGV-1410072_6	phrog_20016	202.9	0	N/A	unknown function
UniRef90	UHGV-1410072_6	UniRef90_A0A285PT46	166.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1410072_6	397290.C810_05214	184.0	0	N/A	N/A
structural_annotation	UHGV-1410072_6	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1410072_7	phrog_16490	190.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1410072_7	397290.C810_01328	187.0	0	N/A	N/A
PHROG	UHGV-1410072_8	phrog_22984	93.4	1.3e-27	N/A	unknown function
PHROG	UHGV-1410072_9	phrog_21718	133.0	1.2e-39	N/A	unknown function
eggNOG-mapper	UHGV-1410072_9	476272.RUMHYD_01768	129.0	2.27e-36	N/A	N/A
UniRef90	UHGV-1410072_10	UniRef90_A0A395X7A4	177.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-1410072_10	476272.RUMHYD_01766	121.0	1.46e-34	N/A	N/A
PHROG	UHGV-1410072_11	phrog_3754	118.0	5.5e-35	N/A	unknown function
eggNOG-mapper	UHGV-1410072_11	476272.RUMHYD_01764	173.0	0	N/A	N/A
PHROG	UHGV-1410072_12	phrog_581	255.0	0	minor head protein	head and packaging
UniRef90	UHGV-1410072_12	UniRef90_A0A395X791	706.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1410072_12	33035.JPJF01000106_gene3134	387.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1410072_12	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1410072_12	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410072_12	PF06152	N/A	N/A	N/A	N/A
KOfam	UHGV-1410072_13	K10804	47.1	0.00000000000031	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
eggNOG-mapper	UHGV-1410072_13	1540090.A0A0A0RS52_9CAUD	119.0	8.12e-26	N/A	N/A
Pfam	UHGV-1410072_13	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
structural_annotation	UHGV-1410072_13	PF14606,NF007819,COG2755	N/A	N/A	N/A	N/A
PHROG	UHGV-1410072_15	phrog_533	285.4	0	portal protein	head and packaging
UniRef90	UHGV-1410072_15	UniRef90_A0A1C6CDM8	703.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1410072_15	33035.JPJF01000106_gene3135	542.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1410072_15	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1410072_16	K06909	383.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1410072_16	phrog_3717	149.0	1.96182e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1410072_16	UniRef90_A0A6L8SYJ6	936.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1410072_16	33035.JPJF01000106_gene3136	529.0	0	Terminase small subunit	N/A
Pfam	UHGV-1410072_16	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1410072_16	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1410072_16	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1410072_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1410072_16	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1410072_17	411470.RUMGNA_03785	56.6	0.0000000241	N/A	N/A
PHROG	UHGV-1410072_18	phrog_25567	41.6	0.0000000000075	N/A	unknown function
eggNOG-mapper	UHGV-1410072_18	608534.GCWU000341_01782	57.0	0.000000234	Helix-turn-helix	N/A
COG	UHGV-1410072_18	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1410072_18	PF08965,NF040522,COG2944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410072_19	PF00196,NF040595,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1410072_20	K18830	40.1	0.000000000076	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1410072_20	phrog_8	44.0	0.0000000000047	transcriptional regulator	transcription regulation
UniRef90	UHGV-1410072_20	UniRef90_A0A414EGC7	75.5	1.38e-16	XRE family transcriptional regulator	N/A
Pfam	UHGV-1410072_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1410072_20	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1410072_20	PF01381,NF041575,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1410072_21	397290.C810_01492	67.8	0.00000000000124	N/A	N/A
structural_annotation	UHGV-1410072_21	PF09038	N/A	N/A	N/A	N/A
PHROG	UHGV-1410072_24	phrog_8684	73.5	1.5e-21	N/A	unknown function
UniRef90	UHGV-1410072_24	UniRef90_UPI001C0EA8EC	170.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1410072_24	457412.RSAG_01162	88.2	3.23e-20	YopX protein	N/A
Pfam	UHGV-1410072_24	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1410072_24	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1410072_25	phrog_874	175.0	0	N/A	unknown function
UniRef90	UHGV-1410072_25	UniRef90_C4IFC5	209.0	0	Upf86.8	N/A
eggNOG-mapper	UHGV-1410072_25	632245.CLP_1629	209.0	0	N/A	N/A
structural_annotation	UHGV-1410072_25	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1410072_26	phrog_20593	44.8	0.0000000000017	N/A	unknown function
eggNOG-mapper	UHGV-1410072_27	476272.RUMHYD_01751	48.9	0.0000044	N/A	N/A
AcrCatalog	UHGV-1410072_27	cluster_11670	43.9	0.0000000152	NA	N/A
PHROG	UHGV-1410072_29	phrog_15198	44.3	0.0000000000021	N/A	unknown function
UniRef90	UHGV-1410072_29	UniRef90_A0A395XB56	180.0	0	N/A	N/A
Pfam	UHGV-1410072_29	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1410072_29	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1410072_30	phrog_419	108.4	7.1e-32	N/A	unknown function
eggNOG-mapper	UHGV-1410072_30	1123312.KB904569_gene346	99.4	4.23e-26	N/A	N/A
structural_annotation	UHGV-1410072_31	PF17888	N/A	N/A	N/A	N/A
UniRef90	UHGV-1410072_33	UniRef90_UPI0018C75AF4	101.0	6.89e-27	Lar family restriction alleviation protein	N/A
Pfam	UHGV-1410072_33	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-1410072_33	PF14354	N/A	N/A	N/A	N/A
KOfam	UHGV-1410072_34	K00558	188.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1410072_34	phrog_116	224.0	0	DNA methyltransferase	other
UniRef90	UHGV-1410072_34	UniRef90_UPI000E4E54B6	724.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1410072_34	742740.HMPREF9474_04317	695.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1410072_34	MTase_II_00020	97.3	1.2e-31	Type II methyltransferase	RM
Pfam	UHGV-1410072_34	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1410072_34	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1410072_34	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1410072_36	596152.DesU5LDRAFT_1910	77.4	0.00000000000000755	N/A	N/A
structural_annotation	UHGV-1410072_36	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-1410072_37	K02315	140.1	1.90002e-41	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1410072_37	phrog_50	136.7	1.90001e-40	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410072_37	UniRef90_UPI001D06D025	520.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1410072_37	397291.C804_01604	244.0	0	Bacterial dnaA protein	N/A
Pfam	UHGV-1410072_37	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1410072_37	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1410072_37	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1410072_38	phrog_10469	105.4	1.2e-32	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410072_38	UniRef90_A0A174WT25	266.0	0	Replication initiator A domain-containing protein	N/A
eggNOG-mapper	UHGV-1410072_38	97138.C820_00775	177.0	0	DnaD domain protein	N/A
COG	UHGV-1410072_38	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1410072_38	PF10771,MF_01177,TIGR01714,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-1410072_39	phrog_244	67.9	2.1e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1410072_39	33035.JPJF01000122_gene2460	167.0	0	N/A	N/A
structural_annotation	UHGV-1410072_39	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
UniRef90	UHGV-1410072_40	UniRef90_UPI00164A90AD	135.0	5.51e-39	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1410072_40	1235800.C819_02254	142.0	3.67e-42	HNH nucleases	N/A
PHROG	UHGV-1410072_41	phrog_72	48.4	0.000000000000083	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1410072_41	411490.ANACAC_00804	132.0	2.08e-36	N/A	N/A
structural_annotation	UHGV-1410072_41	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1410072_42	phrog_7838	138.8	4.00001e-41	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410072_42	UniRef90_A0A8D9UGW3	188.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1410072_42	742767.HMPREF9456_02052	184.0	0	N/A	N/A
structural_annotation	UHGV-1410072_42	PF04098,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1410072_43	phrog_253	107.0	1.6e-31	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410072_43	UniRef90_UPI001C3A3B51	155.0	1.4013e-45	Siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-1410072_43	411470.RUMGNA_02192	148.0	5.1848e-44	Siphovirus Gp157	N/A
Pfam	UHGV-1410072_43	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1410072_43	PF05565	N/A	N/A	N/A	N/A