UHGV-1410606 (vOTU-099974)

Viral Genome: UHGV-1410606

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1410606
vOTU ID	vOTU-099974
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0204078
Associated BioSample	SAMEA2338671
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.88 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9785
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.86
Jumbo phage	No

Genome content
Genome length (bp)	28,694
GC content	46.33%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	53
CDS density	90%
Average CDS length (bps)	489.62
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 82.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1410606_1	33035.JPJF01000030_gene2294	159.0	1.4013e-45	N/A	N/A
PHROG	UHGV-1410606_2	phrog_541	61.2	1.6e-17	head-tail adaptor	connector
PHROG	UHGV-1410606_3	phrog_3366	107.1	7.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-1410606_3	663278.Ethha_0494	109.0	4.28e-29	N/A	N/A
Pfam	UHGV-1410606_3	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1410606_3	PF20536,COG1853	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_4	phrog_556	131.2	3.1e-39	minor head protein	head and packaging
UniRef90	UHGV-1410606_4	UniRef90_UPI000C08BB0A	168.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1410606_4	663278.Ethha_0493	148.0	3.64338e-44	Minor capsid protein	N/A
Pfam	UHGV-1410606_4	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1410606_4	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_5	phrog_3266	162.2	0	tail completion	connector
UniRef90	UHGV-1410606_5	UniRef90_UPI001F2730AA	136.0	1.75e-38	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-1410606_5	411471.SUBVAR_06989	175.0	0	N/A	N/A
structural_annotation	UHGV-1410606_5	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_6	phrog_3099	221.6	0	N/A	unknown function
UniRef90	UHGV-1410606_6	UniRef90_A0A0A8WE72	231.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1410606_6	903814.ELI_3202	204.0	0	N/A	N/A
structural_annotation	UHGV-1410606_6	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_7	phrog_4450	122.4	2.3e-36	N/A	unknown function
UniRef90	UHGV-1410606_7	UniRef90_A0A3D3FBY8	79.3	1.27e-16	AP endonuclease	N/A
eggNOG-mapper	UHGV-1410606_7	545697.HMPREF0216_02856	76.6	1.86e-16	N/A	N/A
Pfam	UHGV-1410606_7	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-1410606_7	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_8	phrog_706	180.4	0	N/A	unknown function
UniRef90	UHGV-1410606_8	UniRef90_A0A1C6FZV2	272.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1410606_8	1499683.CCFF01000017_gene2567	221.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1410606_8	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1410606_8	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_10	phrog_9959	188.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1410606_10	UniRef90_R6NCT4	1214.0	0	Phage tail tape measure protein TP901 family	N/A
eggNOG-mapper	UHGV-1410606_10	663278.Ethha_0487	346.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1410606_10	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1410606_10	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1410606_10	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1410606_10	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_11	phrog_33	44.1	0.0000000000012	distal tail protein Dit	tail
UniRef90	UHGV-1410606_11	UniRef90_R6N293	456.0	0	Putative phage tail component domain protein	N/A
eggNOG-mapper	UHGV-1410606_11	1280689.AUJC01000007_gene3307	55.5	0.0000016	phage tail	N/A
COG	UHGV-1410606_11	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1410606_11	PF20753,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_12	phrog_5555	367.5	0	tail protein	tail
UniRef90	UHGV-1410606_12	UniRef90_R6P8A1	799.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1410606_12	999413.HMPREF1094_00205	223.0	0	N/A	N/A
Pfam	UHGV-1410606_12	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1410606_12	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1410606_12	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1410606_12	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_13	phrog_7121	120.9	5.7e-36	tail fiber protein	tail
UniRef90	UHGV-1410606_13	UniRef90_A7VT91	301.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1410606_13	428125.CLOLEP_00172	311.0	0	COG COG5295 Autotransporter adhesin	N/A
Pfam	UHGV-1410606_13	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-1410606_13	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
KOfam	UHGV-1410606_14	K07273	224.0	0	acm; lysozyme	N/A
PHROG	UHGV-1410606_14	phrog_291	177.3	0	endolysin	lysis
UniRef90	UHGV-1410606_14	UniRef90_A0A1C5NS63	300.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1410606_14	428125.CLOLEP_00561	321.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1410606_14	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1410606_14	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1410606_14	PF01183,TIGR04303,COG3757,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_15	phrog_937	81.2	1.2e-23	hemolysin	other
eggNOG-mapper	UHGV-1410606_15	428125.CLOLEP_00170	224.0	0	N/A	N/A
PHROG	UHGV-1410606_16	phrog_297	55.4	0.000000000000001	holin	lysis
UniRef90	UHGV-1410606_16	UniRef90_A7VT88	182.0	0	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1410606_16	428125.CLOLEP_00169	182.0	0	COG COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1410606_16	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1410606_16	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1410606_16	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410606_16	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-1410606_17	K19370	44.3	0.0000000000016	DNAJC22; DnaJ homolog subfamily C member 22	N/A
PHROG	UHGV-1410606_17	phrog_10292	66.9	1.4e-19	N/A	unknown function
UniRef90	UHGV-1410606_17	UniRef90_R6NCF6	248.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1410606_17	537013.CLOSTMETH_02269	95.9	1.12e-23	TM2 domain	N/A
Pfam	UHGV-1410606_17	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1410606_17	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1410606_17	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1410606_18	K22300	47.2	0.0000000000005	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-1410606_18	UniRef90_R6P7W0	155.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1410606_18	1235797.C816_02851	105.0	9.26e-29	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1410606_18	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1410606_18	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1410606_18	PF13560,NF041951,COG1813	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-1410606_21	cluster_160566	100.0	3.53e-32	NA	N/A
UniRef90	UHGV-1410606_22	UniRef90_R6NCF0	119.0	3.62e-34	RHH_1 domain-containing protein	N/A
Pfam	UHGV-1410606_22	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-1410606_22	PF01402,NF040976,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-1410606_23	K07482	313.3	0	K07482; transposase, IS30 family	N/A
PHROG	UHGV-1410606_23	phrog_4646	383.8	0	transposase	integration and excision
UniRef90	UHGV-1410606_23	UniRef90_R6N1U4	691.0	0	Integrase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-1410606_23	411459.RUMOBE_01705	383.0	0	COG COG2826 Transposase and inactivated derivatives, IS30 family	N/A
Pfam	UHGV-1410606_23	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
NCBIFam	UHGV-1410606_23	NF033563.0	N/A	N/A	IS30 family transposase	N/A
COG	UHGV-1410606_23	COG2826	N/A	N/A	Transposase and inactivated derivatives, IS30 family	N/A
structural_annotation	UHGV-1410606_23	PF03400,PF13384,NF033563,COG2826	N/A	N/A	N/A	N/A
KOfam	UHGV-1410606_24	K07482	45.7	0.00000000000085	K07482; transposase, IS30 family	N/A
PHROG	UHGV-1410606_24	phrog_11420	102.1	2.3e-30	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410606_24	UniRef90_A0A412AWF5	162.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1410606_24	1519439.JPJG01000077_gene919	122.0	1.92e-35	Helix-turn-helix domain	N/A
Pfam	UHGV-1410606_24	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
structural_annotation	UHGV-1410606_24	PF04218	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_34	phrog_659	213.2	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410606_34	UniRef90_A0A843HUJ5	237.0	0	N/A	N/A
eggNOG-mapper	UHGV-1410606_34	1507.HMPREF0262_00431	268.0	0	N/A	N/A
Pfam	UHGV-1410606_34	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1410606_34	PF06378,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_35	phrog_72	55.9	2.6e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410606_35	UniRef90_A0A8D9PDS2	131.0	2.05e-35	NinB protein	N/A
eggNOG-mapper	UHGV-1410606_35	445972.ANACOL_01825	186.0	0	N/A	N/A
structural_annotation	UHGV-1410606_35	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_36	phrog_7566	84.9	5.9e-25	N/A	unknown function
UniRef90	UHGV-1410606_36	UniRef90_A0A371ATG2	57.0	0.0000000274	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1410606_36	693746.OBV_25470	109.0	1.39e-29	N/A	N/A
KOfam	UHGV-1410606_37	K03111	146.2	3.29305e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1410606_37	phrog_44	145.5	2.70451e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410606_37	UniRef90_A7VPP2	199.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1410606_37	428125.CLOLEP_00518	199.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1410606_37	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1410606_37	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1410606_37	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1410606_37	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1410606_37	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_38	phrog_2113	45.4	0.00000000000096	N/A	unknown function
UniRef90	UHGV-1410606_38	UniRef90_A0A3A6EZF7	58.9	0.00000000671	HTH domain-containing protein	N/A
structural_annotation	UHGV-1410606_38	PF21715	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_39	phrog_16304	60.7	4.7e-18	N/A	unknown function
UniRef90	UHGV-1410606_39	UniRef90_A0A1C6HII5	350.0	0	N/A	N/A
eggNOG-mapper	UHGV-1410606_39	1507.HMPREF0262_00303	61.6	0.00000000791	DnaD domain protein	N/A
Pfam	UHGV-1410606_39	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1410606_39	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-1410606_40	K02315	124.1	1.5e-36	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1410606_40	phrog_50	123.3	2.4e-36	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410606_40	UniRef90_A0A1C6HFV4	496.0	0	DNA replication protein	N/A
eggNOG-mapper	UHGV-1410606_40	445972.ANACOL_01829	261.0	0	N/A	N/A
Pfam	UHGV-1410606_40	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1410606_40	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1410606_40	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-1410606_41	K01160	46.9	0.00000000000075	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1410606_41	phrog_140	106.8	1.8e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1410606_41	UniRef90_A0A1C6HG31	284.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1410606_41	411461.DORFOR_00015	118.0	6.26e-32	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1410606_41	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1410606_41	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1410606_41	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_44	phrog_1384	78.5	8.3e-23	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-1410606_44	428125.CLOLEP_01816	231.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-1410606_44	PF00765,MF_02210,NF040502,COG3981	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1410606_45	PF17399	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_46	phrog_2245	90.6	1.6e-26	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1410606_46	UniRef90_A0A4U9RLZ8	84.0	3.05e-19	N/A	N/A
eggNOG-mapper	UHGV-1410606_46	428125.CLOLEP_01814	175.0	0	COG NOG14118 non supervised orthologous group	N/A
structural_annotation	UHGV-1410606_46	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
PHROG	UHGV-1410606_49	phrog_22543	45.6	0.00000000000096	N/A	unknown function
UniRef90	UHGV-1410606_50	UniRef90_UPI001C3A10B1	61.6	0.000000000961	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-1410606_50	742738.HMPREF9460_04055	62.8	0.0000000000374	N/A	N/A
PHROG	UHGV-1410606_51	phrog_924	43.5	0.0000000000047	N/A	unknown function
UniRef90	UHGV-1410606_51	UniRef90_A0A412AV74	174.0	0	N/A	N/A
eggNOG-mapper	UHGV-1410606_51	1316932.MHH_c17560	53.1	0.00000103	N/A	N/A
Pfam	UHGV-1410606_51	PF04448	N/A	N/A	N/A	DUF551