UHGV-1411519 (vOTU-083221)

Viral Genome: UHGV-1411519

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1411519
vOTU ID	vOTU-083221
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0238626
Associated BioSample	SAMEA2738172
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.952
Virus hallmark genes (geNomad)	3
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	45.29
Jumbo phage	No

Genome content
Genome length (bp)	35,018
GC content	27.22%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	93%
Average CDS length (bps)	589.69
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1411519_1	469604.HMPREF0946_00800	156.0	2.43994e-41	N/A	N/A
Pfam	UHGV-1411519_1	PF05857	N/A	N/A	TraX protein	TraX
KOfam	UHGV-1411519_6	K06400	354.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1411519_6	phrog_95	354.2	0	integrase	integration and excision
UniRef90	UHGV-1411519_6	UniRef90_D6BE42	644.0	0	DNA integration/recombination protein	N/A
eggNOG-mapper	UHGV-1411519_6	556263.FSEG_00449	516.0	0	Recombinase zinc beta ribbon domain	N/A
Pfam	UHGV-1411519_6	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1411519_6	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1411519_6	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1411519_6	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1411519_6	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_8	phrog_173	81.1	1.7e-23	nucleoside triphosphate pyrophosphohydrolase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1411519_8	UniRef90_A0A2C6BH02	274.0	0	dUTP diphosphatase	N/A
Pfam	UHGV-1411519_8	PF08761	N/A	N/A	dUTPase	dUTPase_2
structural_annotation	UHGV-1411519_8	PF08761,COG4508	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_9	phrog_419	95.6	6.2e-28	N/A	unknown function
UniRef90	UHGV-1411519_9	UniRef90_UPI001CC11C4F	81.6	2.78e-18	PGDYG domain-containing protein	N/A
eggNOG-mapper	UHGV-1411519_9	457405.FSDG_01548	188.0	0	N/A	N/A
structural_annotation	UHGV-1411519_9	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_10	phrog_954	246.7	0	DNA methyltransferase	other
UniRef90	UHGV-1411519_10	UniRef90_A0A140PWJ5	311.0	0	Methyltransf_11 domain-containing protein	N/A
eggNOG-mapper	UHGV-1411519_10	469604.HMPREF0946_01120	312.0	0	methyltransferase	N/A
PADLOC	UHGV-1411519_10	MTase_II_00074	239.4	0	Type II methyltransferase	RM
Pfam	UHGV-1411519_10	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1411519_10	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-1411519_10	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_14	phrog_236	101.4	1.2e-29	nucleotide kinase	other
UniRef90	UHGV-1411519_14	UniRef90_U7T745	114.0	5.61e-29	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1411519_14	469604.HMPREF0946_01115	285.0	0	N/A	N/A
Pfam	UHGV-1411519_14	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-1411519_16	phrog_398	133.0	6.10001e-40	N/A	unknown function
UniRef90	UHGV-1411519_16	UniRef90_UPI000BDEEDBE	79.7	0.00000000000000919	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-1411519_16	469604.HMPREF0946_01113	475.0	0	N/A	N/A
Pfam	UHGV-1411519_16	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-1411519_16	PF16784	N/A	N/A	N/A	N/A
KOfam	UHGV-1411519_18	K03111	94.0	2.6e-27	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1411519_18	phrog_44	107.8	1.2e-31	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1411519_18	UniRef90_UPI00195CC8BB	224.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1411519_18	546275.FUSPEROL_01803	112.0	4.92e-30	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1411519_18	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1411519_18	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1411519_18	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1411519_18	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1411519_18	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_19	phrog_253	99.8	2.7e-29	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1411519_19	UniRef90_UPI0007888E09	189.0	0	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-1411519_19	457405.FSDG_01557	275.0	0	Siphovirus Gp157	N/A
Pfam	UHGV-1411519_19	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1411519_19	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_20	phrog_14970	260.7	0	N/A	unknown function
UniRef90	UHGV-1411519_20	UniRef90_A0A3P6JH63	199.0	0	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-1411519_20	469604.HMPREF0946_01110	435.0	0	DNA recombination	N/A
COG	UHGV-1411519_20	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1411519_20	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_24	phrog_17986	102.9	1.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-1411519_24	469604.HMPREF0946_02147	107.0	9.67e-30	N/A	N/A
KOfam	UHGV-1411519_26	K22299	58.0	2.3e-16	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-1411519_26	UniRef90_A0A162IQE8	196.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1411519_26	888055.HMPREF9015_01079	120.0	4.47e-33	Transcriptional regulator	N/A
Pfam	UHGV-1411519_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1411519_26	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-1411519_26	PF01381,MF_02017,TIGR02607,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_30	phrog_428	178.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1411519_30	UniRef90_A0A133P0R8	392.0	0	Phg_2220_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1411519_30	469604.HMPREF0946_00822	187.0	0	Transcriptional regulator	N/A
Pfam	UHGV-1411519_30	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-1411519_30	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-1411519_30	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-1411519_30	COG1802	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
KOfam	UHGV-1411519_31	K02315	170.3	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1411519_31	phrog_50	159.1	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1411519_31	UniRef90_C7XPK5	514.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1411519_31	469604.HMPREF0946_00821	514.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-1411519_31	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1411519_31	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1411519_31	PF01695,PF06827,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_34	phrog_824	57.2	2.8e-16	N/A	unknown function
UniRef90	UHGV-1411519_34	UniRef90_A0A0S2ZD03	199.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1411519_34	469618.FVAG_00788	133.0	3.48e-39	VRR_NUC	N/A
Pfam	UHGV-1411519_34	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1411519_34	PF03838,MF_00130,NF002585,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_37	phrog_2277	55.2	7.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1411519_37	469604.HMPREF0946_00817	59.3	0.0000000000619	N/A	N/A
UniRef90	UHGV-1411519_39	UniRef90_C7XPJ8	325.0	0	HTH luxR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1411519_39	469604.HMPREF0946_00814	325.0	0	N/A	N/A
Pfam	UHGV-1411519_39	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-1411519_39	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1411519_39	PF13384,NF040595,COG3677	N/A	N/A	N/A	N/A
KOfam	UHGV-1411519_40	K06909	67.6	1.7e-19	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1411519_40	phrog_2	78.4	1.3e-22	terminase large subunit	head and packaging
UniRef90	UHGV-1411519_40	UniRef90_UPI0007886C89	598.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-1411519_40	469604.HMPREF0946_00813	844.0	0	N/A	N/A
structural_annotation	UHGV-1411519_40	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1411519_41	PF11039,MF_02210,NF011709,COG1670	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_43	phrog_332	167.4	0	head-tail adaptor	connector
UniRef90	UHGV-1411519_43	UniRef90_UPI001B8C4F28	586.0	0	portal protein	N/A
eggNOG-mapper	UHGV-1411519_43	469604.HMPREF0946_00811	544.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-1411519_43	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-1411519_43	PF12236,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1411519_46	UniRef90_UPI001B8B5011	276.0	0	phage major capsid protein	N/A
structural_annotation	UHGV-1411519_46	PF19821,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_48	phrog_3811	49.3	0.000000000000075	N/A	unknown function
UniRef90	UHGV-1411519_48	UniRef90_U7TUR8	283.0	0	N/A	N/A
eggNOG-mapper	UHGV-1411519_48	556263.FSEG_02016	117.0	2.11e-30	N/A	N/A
Pfam	UHGV-1411519_48	PF11192	N/A	N/A	N/A	DUF2977
Pfam	UHGV-1411519_48	PF14301	N/A	N/A	N/A	DUF4376
structural_annotation	UHGV-1411519_48	PF14301	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_49	phrog_435	82.2	8.3e-24	endolysin	lysis
UniRef90	UHGV-1411519_49	UniRef90_A0A2C6BJS5	266.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1411519_49	469606.FSCG_00675	241.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1411519_49	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1411519_49	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1411519_49	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1411519_50	393480.FNP_1708	136.0	1.10001e-40	N/A	N/A
PHROG	UHGV-1411519_51	phrog_1158	102.8	1.7e-30	tail assembly chaperone	tail
UniRef90	UHGV-1411519_51	UniRef90_UPI001237CF66	273.0	0	N/A	N/A
eggNOG-mapper	UHGV-1411519_51	469604.HMPREF0946_00803	284.0	0	N/A	N/A
Pfam	UHGV-1411519_51	PF07087	N/A	N/A	N/A	DUF1353
structural_annotation	UHGV-1411519_51	PF07087	N/A	N/A	N/A	N/A
PHROG	UHGV-1411519_53	phrog_394	43.5	0.0000000000041	tail protein	tail
eggNOG-mapper	UHGV-1411519_53	469604.HMPREF0946_00801	176.0	0	N/A	N/A
structural_annotation	UHGV-1411519_53	PF17212	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1411519_54	469604.HMPREF0946_00800	204.0	0	N/A	N/A
eggNOG-mapper	UHGV-1411519_55	469604.HMPREF0946_00800	50.4	0.00000253	N/A	N/A