UHGV-1413134 (vOTU-077409)

Viral Genome: UHGV-1413134

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1413134
vOTU ID	vOTU-077409
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0285666
Associated BioSample	SAMEA3951756
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	93.94 (High-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9793
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	49.88
Jumbo phage	No

Genome content
Genome length (bp)	43,315
GC content	51.46%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	91%
Average CDS length (bps)	658.60
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.94)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1413134_2	K07449	112.1	3.6e-33	K07449; similar to archaeal holliday junction resolvase and Mrr protein	N/A
UniRef90	UHGV-1413134_2	UniRef90_A0A7X8KS16	123.0	2.24e-32	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-1413134_2	1132442.KB889752_gene2851	98.2	3.38e-23	Restriction endonuclease	N/A
PADLOC	UHGV-1413134_2	ZorD1_00005	52.0	0.0000000000000071	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1413134_2	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-1413134_2	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
Pfam	UHGV-1413134_3	PF08681	N/A	N/A	N/A	DUF1778
structural_annotation	UHGV-1413134_3	PF03869	N/A	N/A	N/A	N/A
Pfam	UHGV-1413134_4	PF03869	N/A	N/A	Arc-like DNA binding domain	Arc
structural_annotation	UHGV-1413134_4	PF03869	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1413134_7	1519439.JPJG01000054_gene2128	50.1	0.000000789	N/A	N/A
structural_annotation	UHGV-1413134_8	TIGR00663,COG0592	N/A	N/A	N/A	N/A
KOfam	UHGV-1413134_9	K03466	310.3	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-1413134_9	phrog_1358	219.4	0	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1413134_9	UniRef90_UPI001A9BEAD8	254.0	0	N/A	N/A
eggNOG-mapper	UHGV-1413134_9	1410624.JNKK01000004_gene395	222.0	0	Ftsk_gamma	N/A
PADLOC	UHGV-1413134_9	SspH_00004	173.8	0	SspH	SSP
Pfam	UHGV-1413134_9	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-1413134_9	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
UniRef90	UHGV-1413134_10	UniRef90_UPI001D07B715	71.6	0.0000000000027	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1413134_10	1280663.ATVR01000009_gene2143	52.8	0.00000387	N/A	N/A
UniRef90	UHGV-1413134_12	UniRef90_UPI001C0F88AA	152.0	8.68805e-44	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1413134_12	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
Pfam	UHGV-1413134_12	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1413134_12	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
PHROG	UHGV-1413134_14	phrog_6721	296.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1413134_14	411473.RUMCAL_00916	267.0	0	N/A	N/A
structural_annotation	UHGV-1413134_14	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_15	phrog_229	110.9	1.1e-32	MazG-like pyrophosphatase	other
UniRef90	UHGV-1413134_15	UniRef90_A0A4D7AN38	168.0	0	Nucleoside triphosphate pyrophosphohydrolase family protein	N/A
eggNOG-mapper	UHGV-1413134_15	411473.RUMCAL_00277	147.0	2.38221e-44	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1413134_15	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1413134_15	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1413134_15	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_16	phrog_236	95.4	1e-27	nucleotide kinase	other
UniRef90	UHGV-1413134_16	UniRef90_UPI00189EF638	126.0	3.57e-36	N/A	N/A
eggNOG-mapper	UHGV-1413134_16	1236504.HMPREF2132_11120	80.5	5.41e-19	N/A	N/A
Pfam	UHGV-1413134_16	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1413134_16	PF11753	N/A	N/A	N/A	N/A
KOfam	UHGV-1413134_17	K14440	131.1	1.9e-39	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1413134_17	phrog_62	414.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1413134_17	UniRef90_UPI0007812D71	547.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-1413134_17	693746.OBV_01800	537.0	0	snf2 family	N/A
PADLOC	UHGV-1413134_17	DpdE_00010	84.2	1.5e-24	DpdE	DPD
Pfam	UHGV-1413134_17	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
COG	UHGV-1413134_17	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1413134_17	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_18	phrog_93	57.1	2.4e-16	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1413134_18	UniRef90_A0A163YEE0	82.8	2.15e-18	Nuclease	N/A
eggNOG-mapper	UHGV-1413134_18	938288.HG326225_gene1158	82.0	7.24e-19	VRR-NUC domain protein	N/A
PHROG	UHGV-1413134_21	phrog_256	595.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1413134_21	UniRef90_UPI000B360B6E	677.0	0	virulence-associated E family protein	N/A
eggNOG-mapper	UHGV-1413134_21	693746.OBV_01820	645.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1413134_21	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-1413134_21	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-1413134_21	PF05272,NF011296,NF040562,COG5545	N/A	N/A	N/A	N/A
KOfam	UHGV-1413134_22	K02334	832.4	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-1413134_22	phrog_17	402.0	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1413134_22	UniRef90_UPI0004B36767	748.0	0	DNA polymerase	N/A
eggNOG-mapper	UHGV-1413134_22	1408437.JNJN01000045_gene604	698.0	0	DNA polymerase	N/A
Pfam	UHGV-1413134_22	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-1413134_22	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-1413134_22	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_23	phrog_112	156.1	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1413134_23	UniRef90_A0A3R6MD20	154.0	7.00649e-44	N/A	N/A
eggNOG-mapper	UHGV-1413134_23	1235799.C818_04198	151.0	1.76564e-43	N/A	N/A
Pfam	UHGV-1413134_23	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-1413134_23	PF10991,MF_04153	N/A	N/A	N/A	N/A
KOfam	UHGV-1413134_24	K07465	40.0	0.0000000000067	K07465; putative RecB family exonuclease	N/A
PHROG	UHGV-1413134_24	phrog_69	302.0	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1413134_24	UniRef90_UPI001CD6CFC8	297.0	0	N/A	N/A
eggNOG-mapper	UHGV-1413134_24	679201.HMPREF9334_00306	283.0	0	N/A	N/A
Pfam	UHGV-1413134_24	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-1413134_24	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-1413134_24	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
UniRef90	UHGV-1413134_29	UniRef90_A0A416KCJ3	68.2	0.000000000000178	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1413134_29	536233.CLO_0859	55.1	0.00000000334	Helix-turn-helix domain	N/A
Pfam	UHGV-1413134_29	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1413134_29	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
UniRef90	UHGV-1413134_30	UniRef90_A0A7G9WJI3	50.4	0.000000947	Helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-1413134_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
KOfam	UHGV-1413134_33	K00390	101.1	5.6e-30	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1413134_33	phrog_424	104.3	1.2e-30	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1413134_33	UniRef90_UPI001C110192	464.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1413134_33	1408437.JNJN01000032_gene2312	276.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1413134_33	BrxP_00001	80.0	3.5e-24	BrxP	BREX
Pfam	UHGV-1413134_33	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1413134_33	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1413134_33	PF01507,MF_00064,TIGR02039,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-1413134_34	UniRef90_L7VHB2	68.9	0.000000000000044	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1413134_34	1121335.Clst_0370	68.9	0.00000000000000739	N/A	N/A
Pfam	UHGV-1413134_34	PF05043	N/A	N/A	Mga helix-turn-helix domain	Mga
structural_annotation	UHGV-1413134_34	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1413134_35	K22300	56.4	6.7e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1413134_35	phrog_8	65.3	1.3e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1413134_35	UniRef90_B0P3B2	131.0	1.61e-36	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1413134_35	1405.DJ92_884	109.0	1.52e-28	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1413134_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1413134_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1413134_35	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_36	phrog_87	88.3	5.3e-26	metallo-protease	other
UniRef90	UHGV-1413134_36	UniRef90_A0A1C6FDJ4	159.0	0	Metallopeptidase immA	N/A
eggNOG-mapper	UHGV-1413134_36	1295642.H839_16153	135.0	1.19e-38	N/A	N/A
Pfam	UHGV-1413134_36	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1413134_36	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1413134_36	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1413134_37	K14059	243.2	0	int; integrase	N/A
PHROG	UHGV-1413134_37	phrog_1	224.1	0	integrase	integration and excision
UniRef90	UHGV-1413134_37	UniRef90_UPI001F29BE69	287.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1413134_37	1415774.U728_1719	285.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-1413134_37	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-1413134_37	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1413134_37	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1413134_37	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1413134_37	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_38	phrog_19111	42.2	0.000000000006	N/A	unknown function
eggNOG-mapper	UHGV-1413134_38	1274374.CBLK010000060_gene508	60.5	0.000000187	nuclear chromosome segregation	N/A
COG	UHGV-1413134_38	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1413134_39	phrog_13589	200.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1413134_39	742733.HMPREF9469_05009	238.0	0	N/A	N/A
PHROG	UHGV-1413134_40	phrog_31538	55.9	8.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-1413134_40	428125.CLOLEP_01433	52.8	0.000000118	N/A	N/A
eggNOG-mapper	UHGV-1413134_41	1485543.JMME01000005_gene881	70.5	0.0000000000000362	N/A	N/A
structural_annotation	UHGV-1413134_41	PF16407,NF032891,COG5456	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1413134_42	PF03412,COG4990	N/A	N/A	N/A	N/A
UniRef90	UHGV-1413134_43	UniRef90_UPI001C109117	163.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1413134_43	877414.ATWA01000062_gene1614	94.7	7.72e-24	Bacteriophage holin family	N/A
Pfam	UHGV-1413134_43	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1413134_43	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1413134_43	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_46	phrog_6616	264.3	0	tail protein	tail
eggNOG-mapper	UHGV-1413134_46	1121866.AUGK01000003_gene1439	135.0	2.55e-29	Phage minor structural protein	N/A
COG	UHGV-1413134_46	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1413134_47	phrog_1194	85.0	6e-25	N/A	unknown function
eggNOG-mapper	UHGV-1413134_47	702450.CUW_0546	61.2	0.000000000194	N/A	N/A
Pfam	UHGV-1413134_47	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1413134_47	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_48	phrog_1535	110.3	6e-34	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1413134_48	1123263.AUKY01000015_gene1620	136.0	1.45e-29	Phage tail tape measure protein TP901	N/A
COG	UHGV-1413134_48	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1413134_48	PF09325	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1413134_49	1121333.JMLH01000047_gene1011	77.8	1.57e-16	N/A	N/A
UniRef90	UHGV-1413134_50	UniRef90_UPI0018A0054C	100.0	1.83e-25	N/A	N/A
eggNOG-mapper	UHGV-1413134_50	1123263.AUKY01000015_gene1618	89.4	1.09e-21	N/A	N/A
Pfam	UHGV-1413134_50	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1413134_50	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_51	phrog_158	56.8	4.1e-16	major tail protein	tail
UniRef90	UHGV-1413134_51	UniRef90_D7GQN5	106.0	2.31e-26	Phage tail protein	N/A
structural_annotation	UHGV-1413134_51	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1413134_52	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1413134_53	476272.RUMHYD_01963	64.7	0.000000000144	N/A	N/A
eggNOG-mapper	UHGV-1413134_54	1232453.BAIF02000058_gene1630	49.7	0.0000078	N/A	N/A
UniRef90	UHGV-1413134_55	UniRef90_UPI001898B4B4	101.0	7.55e-26	phage head-tail connector protein	N/A
Pfam	UHGV-1413134_55	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1413134_55	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_56	phrog_1328	114.5	6.9e-34	major head protein	head and packaging
UniRef90	UHGV-1413134_56	UniRef90_UPI00164DD2D5	442.0	0	N/A	N/A
eggNOG-mapper	UHGV-1413134_56	665956.HMPREF1032_03619	221.0	0	N/A	N/A
Pfam	UHGV-1413134_56	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-1413134_56	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_58	phrog_64	215.9	0	portal protein	head and packaging
UniRef90	UHGV-1413134_58	UniRef90_A0A414B012	495.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1413134_58	1123263.AUKY01000015_gene1609	348.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1413134_58	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1413134_58	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_59	phrog_38	166.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1413134_59	UniRef90_UPI0018A0C9C4	746.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1413134_59	1298920.KI911353_gene2682	276.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1413134_59	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1413134_59	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1413134_59	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1413134_60	phrog_3675	84.6	6.9e-25	N/A	unknown function
UniRef90	UHGV-1413134_60	UniRef90_UPI001D08FCA4	114.0	6.73e-31	YjcQ family protein	N/A
eggNOG-mapper	UHGV-1413134_60	1235802.C823_04879	122.0	1.02e-34	YjcQ protein	N/A
Pfam	UHGV-1413134_60	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1413134_60	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A