UHGV-1415797 (vOTU-012943)

Viral Genome: UHGV-1415797

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-1415797
vOTU ID	vOTU-012943
Representative Genome?	Yes
Source	MGV
Original Genome ID	MGV-GENOME-0237663
Associated Biosample	SAMN02334143
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	92.91 (High-quality)
Trimmed?	No
CheckV Viral Markers	8
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9735
Viral Hallmark Genes (geNomad)	5
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	23.3
Jumbo Phage?	No

Genome Content
Length (bps)	34,835
GC Content	28.60%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	50
CDS Density	94%
Average CDS Length (bps)	651.96
Total tRNA Genes	4
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 92.91)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1415797_1	phrog_16381	153.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1415797_1	1280.SAXN108_2275	158.0	1.82001e-40	Phage minor structural protein	N/A
COG	UHGV-1415797_1	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
UniRef90	UHGV-1415797_2	UniRef90_A0A8F2F0T4	199.0	0	LPD23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1415797_2	1131462.DCF50_p1798	225.0	0	N/A	N/A
Pfam	UHGV-1415797_2	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-1415797_2	PF10263	N/A	N/A	SprT-like family	SprT-like
structural_annotation	UHGV-1415797_3	PF08703,TIGR01000	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1415797_4	445971.ANASTE_00721	374.0	0	N/A	N/A
structural_annotation	UHGV-1415797_4	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-1415797_5	phrog_13046	80.5	2e-23	N/A	unknown function
structural_annotation	UHGV-1415797_5	PF20387	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1415797_6	PF00379	N/A	N/A	N/A	N/A
PHROG	UHGV-1415797_8	phrog_267	76.7	2.6e-22	major head protein	head and packaging
UniRef90	UHGV-1415797_8	UniRef90_R7ELR8	129.0	1.57e-32	Capsid protein	N/A
eggNOG-mapper	UHGV-1415797_8	445971.ANASTE_00718	188.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-1415797_8	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1415797_10	phrog_156	87.5	2.1e-27	portal protein	head and packaging
eggNOG-mapper	UHGV-1415797_10	445971.ANASTE_00716	385.0	0	N/A	N/A
structural_annotation	UHGV-1415797_10	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1415797_13	phrog_38407	82.8	2.7e-24	N/A	unknown function
UniRef90	UHGV-1415797_13	UniRef90_R6ELB5	585.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-1415797_13	445971.ANASTE_00711	280.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1415797_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1415797_13	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
KOfam	UHGV-1415797_14	K07474	56.6	8.2e-16	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1415797_14	phrog_1595	75.4	6.9e-22	terminase small subunit	head and packaging
UniRef90	UHGV-1415797_14	UniRef90_A0A0V8DX64	72.8	0.000000000000115	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1415797_14	1140002.I570_04018	62.0	0.000000000287	DNA packaging	N/A
Pfam	UHGV-1415797_14	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1415797_14	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1415797_14	PF03592,COG3728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1415797_15	PF15456	N/A	N/A	N/A	N/A
PHROG	UHGV-1415797_17	phrog_8470	148.4	4.2039e-45	N/A	unknown function
UniRef90	UHGV-1415797_17	UniRef90_UPI001D12E223	89.0	0.00000000000000135	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1415797_17	1232449.BAHV02000018_gene1540	117.0	9.55e-26	PcfJ-like protein	N/A
Pfam	UHGV-1415797_17	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1415797_17	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1415797_18	phrog_7445	48.7	0.00000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1415797_18	1232449.BAHV02000018_gene1541	55.1	0.000000118	PcfK-like protein	N/A
Pfam	UHGV-1415797_18	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-1415797_18	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-1415797_19	phrog_20735	191.9	0	N/A	unknown function
UniRef90	UHGV-1415797_19	UniRef90_R5A140	339.0	0	RNA_ligase domain-containing protein	N/A
Pfam	UHGV-1415797_19	PF09414	N/A	N/A	RNA ligase	RNA_ligase
structural_annotation	UHGV-1415797_19	PF09414,MF_04150,TIGR01209,COG1423	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1415797_21	PF20384,COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-1415797_35	phrog_1389	67.8	1.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-1415797_35	1347392.CCEZ01000060_gene3269	68.9	0.000000000000116	N/A	N/A
structural_annotation	UHGV-1415797_35	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
KOfam	UHGV-1415797_36	K03111	121.3	1.2e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1415797_36	phrog_44	136.2	2e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1415797_36	UniRef90_A0A353JB48	120.0	3.97e-32	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1415797_36	1545701.LACWKB10_1167	108.0	1.49e-28	Single-strand binding protein family	N/A
Pfam	UHGV-1415797_36	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1415797_36	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1415797_36	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1415797_36	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1415797_36	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1415797_38	phrog_674	116.8	1.3e-34	N/A	unknown function
UniRef90	UHGV-1415797_38	UniRef90_A0A7X7EMF4	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-1415797_38	411901.BACCAC_02353	148.0	5.66e-40	N/A	N/A
Pfam	UHGV-1415797_38	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1415797_38	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1415797_40	phrog_1123	42.3	0.0000000000092	N/A	unknown function
UniRef90	UHGV-1415797_40	UniRef90_A0A7X6P6Q9	70.1	0.000000000000156	DNA gyrase	N/A
eggNOG-mapper	UHGV-1415797_40	1308863.U5J9F3_9CAUD	62.0	0.0000000000547	N/A	N/A
structural_annotation	UHGV-1415797_40	PF03551,TIGR02719,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1415797_42	phrog_16304	48.4	0.000000000000083	N/A	unknown function
UniRef90	UHGV-1415797_42	UniRef90_A0A6M3IY07	103.0	1.18e-23	N/A	N/A
eggNOG-mapper	UHGV-1415797_42	445971.ANASTE_00700	83.6	1.36e-16	N/A	N/A
Pfam	UHGV-1415797_42	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1415797_42	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1415797_42	PF07120,COG3756	N/A	N/A	N/A	N/A
PHROG	UHGV-1415797_44	phrog_989	42.0	0.0000000000079	N/A	unknown function
KOfam	UHGV-1415797_46	K22299	42.1	0.000000000017	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1415797_46	phrog_8	40.4	0.000000000061	transcriptional regulator	transcription regulation
UniRef90	UHGV-1415797_46	UniRef90_A0A2H0M530	48.5	0.00000478	DNA-binding protein	N/A
Pfam	UHGV-1415797_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1415797_46	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-1415797_47	K22299	42.2	0.000000000002	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-1415797_47	UniRef90_UPI001F4D780E	67.4	0.000000000267	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1415797_47	435837.HMPREF0798_00830	68.2	0.0000000000289	Helix-turn-helix	N/A
Pfam	UHGV-1415797_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1415797_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-1415797_49	UniRef90_R5AAT8	146.0	1.52742e-43	Peptidase_M78 domain-containing protein	N/A
Pfam	UHGV-1415797_49	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-1415797_49	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1415797_50	K14059	170.4	0	int; integrase	N/A
PHROG	UHGV-1415797_50	phrog_1	164.0	0	integrase	integration and excision
UniRef90	UHGV-1415797_50	UniRef90_R5A639	332.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1415797_50	1123405.AUMM01000039_gene173	95.9	4.41e-19	Phage integrase family	N/A
Pfam	UHGV-1415797_50	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1415797_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1415797_50	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1415797_50	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A