UHGV-1418346 (vOTU-082723)

Viral Genome: UHGV-1418346

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1418346
vOTU ID	vOTU-082723
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0285949
Associated BioSample	SAMEA4545406
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9815
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.44
Jumbo phage	No

Genome content
Genome length (bp)	43,377
GC content	57.40%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	61
CDS density	95%
Average CDS length (bps)	676.28
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1418346_1	phrog_4433	162.8	0	N/A	unknown function
UniRef90	UHGV-1418346_1	UniRef90_A0A6M5C839	99.8	2.27e-23	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-1418346_1	665950.HMPREF1025_01373	111.0	2.03e-27	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1418346_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
KOfam	UHGV-1418346_2	K22300	52.3	0.000000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1418346_2	phrog_8	41.7	0.000000000022	transcriptional regulator	transcription regulation
Pfam	UHGV-1418346_2	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1418346_2	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
PHROG	UHGV-1418346_5	phrog_7566	88.6	4.1e-26	N/A	unknown function
UniRef90	UHGV-1418346_5	UniRef90_A0A3D5LSW4	60.8	0.000000000344	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1418346_5	693746.OBV_24070	102.0	3.79e-27	N/A	N/A
UniRef90	UHGV-1418346_7	UniRef90_A0A374UNQ5	67.8	0.000000000000222	XRE family transcriptional regulator	N/A
Pfam	UHGV-1418346_7	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-1418346_7	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1418346_11	K22300	67.6	2.2e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1418346_11	phrog_4	52.3	0.000000000000013	transcriptional repressor	transcription regulation
UniRef90	UHGV-1418346_11	UniRef90_A0A1C6CFH8	125.0	1.25e-34	Putative zinc finger/helix-turn-helix protein, YgiT family	N/A
eggNOG-mapper	UHGV-1418346_11	903814.ELI_1263	106.0	4.52e-28	Helix-turn-helix domain	N/A
Pfam	UHGV-1418346_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1418346_11	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1418346_11	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1418346_14	97138.C820_02123	61.2	0.00000000118	Staphylococcal nuclease homologues	N/A
Pfam	UHGV-1418346_14	PF02805	N/A	N/A	Metal binding domain of Ada	Ada_Zn_binding
COG	UHGV-1418346_14	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
Pfam	UHGV-1418346_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1418346_16	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1418346_17	K14059	123.6	2.3e-36	int; integrase	N/A
PHROG	UHGV-1418346_17	phrog_1	128.9	4.4e-38	integrase	integration and excision
UniRef90	UHGV-1418346_17	UniRef90_A0A174DBH0	316.0	0	Site-specific tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-1418346_17	642492.Clole_0926	71.2	0.0000000000709	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1418346_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1418346_17	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1418346_17	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1418346_18	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1418346_19	phrog_20016	192.4	0	N/A	unknown function
UniRef90	UHGV-1418346_19	UniRef90_A0A285PT46	185.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1418346_19	1226322.HMPREF1545_00077	164.0	0	N/A	N/A
structural_annotation	UHGV-1418346_19	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1418346_20	phrog_16490	114.0	1.8e-34	N/A	unknown function
eggNOG-mapper	UHGV-1418346_20	1408437.JNJN01000043_gene803	142.0	4.62e-39	N/A	N/A
PHROG	UHGV-1418346_21	phrog_22984	56.4	7.4e-17	N/A	unknown function
PHROG	UHGV-1418346_22	phrog_21718	95.0	7.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-1418346_22	476272.RUMHYD_01768	86.3	8.7e-20	N/A	N/A
PHROG	UHGV-1418346_23	phrog_3754	108.8	4e-32	N/A	unknown function
eggNOG-mapper	UHGV-1418346_23	1226322.HMPREF1545_00073	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-1418346_24	1519439.JPJG01000060_gene1905	456.0	0	N/A	N/A
Pfam	UHGV-1418346_24	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
eggNOG-mapper	UHGV-1418346_25	1203606.HMPREF1526_02741	76.3	0.000000000000859	N/A	N/A
PHROG	UHGV-1418346_26	phrog_156	206.4	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1418346_26	1519439.JPJG01000060_gene1886	531.0	0	N/A	N/A
structural_annotation	UHGV-1418346_26	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1418346_27	K06909	221.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1418346_27	phrog_3717	210.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1418346_27	UniRef90_A0A1Y3SC75	571.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1418346_27	1226322.HMPREF1545_03843	556.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-1418346_27	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-1418346_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1418346_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1418346_27	PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1418346_28	phrog_511	171.0	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1418346_28	1226322.HMPREF1545_00785	280.0	0	N/A	N/A
structural_annotation	UHGV-1418346_28	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1418346_30	phrog_371	112.7	3.2e-33	major head protein	head and packaging
UniRef90	UHGV-1418346_30	UniRef90_A0A8F2JBL2	250.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-1418346_30	1226322.HMPREF1545_03848	287.0	0	N/A	N/A
structural_annotation	UHGV-1418346_30	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1418346_31	phrog_24113	86.6	1.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-1418346_31	1226322.HMPREF1545_03847	74.3	0.00000000000000584	N/A	N/A
structural_annotation	UHGV-1418346_31	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-1418346_32	phrog_35275	133.8	1.4e-40	N/A	unknown function
eggNOG-mapper	UHGV-1418346_32	1226322.HMPREF1545_03846	117.0	1.27e-27	N/A	N/A
structural_annotation	UHGV-1418346_34	PF16509,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1418346_35	K22409	74.5	1.7e-21	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1418346_35	phrog_21357	105.0	4.8e-31	endolysin	lysis
UniRef90	UHGV-1418346_35	UniRef90_A0A3R6VVB9	283.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1418346_35	97139.C824_00684	287.0	0	lysozyme activity	N/A
Pfam	UHGV-1418346_35	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1418346_35	PF01476	N/A	N/A	LysM domain	LysM
Pfam	UHGV-1418346_35	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1418346_35	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1418346_35	PF01471,PF10030,TIGR02594,NF038080,COG3409,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1418346_36	phrog_881	84.3	7.4e-25	holin	lysis
UniRef90	UHGV-1418346_36	UniRef90_A0A4Q7P349	113.0	1.02e-31	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-1418346_36	742740.HMPREF9474_02251	114.0	1.31e-32	Putative phage holin Dp-1	N/A
Pfam	UHGV-1418346_36	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1418346_36	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1418346_37	phrog_937	54.6	0.000000000000002	hemolysin	other
eggNOG-mapper	UHGV-1418346_37	1297617.JPJD01000099_gene2176	48.1	0.00000663	N/A	N/A
PHROG	UHGV-1418346_39	phrog_12105	66.6	1.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-1418346_39	1226322.HMPREF1545_03850	77.8	0.0000000000000262	N/A	N/A
PHROG	UHGV-1418346_40	phrog_606	70.5	4.3e-21	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-1418346_40	1226322.HMPREF1545_03842	71.2	0.0000000000012	DNA-packaging protein gp3	N/A
Pfam	UHGV-1418346_40	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1418346_40	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1418346_42	phrog_3584	130.6	7e-39	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1418346_42	1226322.HMPREF1545_03841	147.0	6.09e-40	N/A	N/A
structural_annotation	UHGV-1418346_42	PF01446,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-1418346_51	phrog_2245	94.9	6.9e-28	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-1418346_51	293826.Amet_2596	86.3	7.15e-20	N/A	N/A
Pfam	UHGV-1418346_54	PF05267	N/A	N/A	N/A	DUF725
PHROG	UHGV-1418346_56	phrog_5781	83.2	3e-24	N/A	unknown function
UniRef90	UHGV-1418346_56	UniRef90_A0A2V2FSM6	124.0	1.19e-34	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-1418346_56	573061.Clocel_3558	97.4	5.65e-25	N/A	N/A
Pfam	UHGV-1418346_56	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-1418346_56	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-1418346_56	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
Pfam	UHGV-1418346_57	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1418346_57	NF041588	N/A	N/A	N/A	N/A
KOfam	UHGV-1418346_59	K00558	163.4	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1418346_59	phrog_363	244.8	0	DNA methyltransferase	other
UniRef90	UHGV-1418346_59	UniRef90_G4KRB8	340.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1418346_59	693746.OBV_01900	340.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1418346_59	MTase_II_00058	126.0	4e-37	Type II methyltransferase	RM
Pfam	UHGV-1418346_59	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1418346_59	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1418346_59	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1418346_59	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1418346_60	K00390	89.1	3.1e-26	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1418346_60	phrog_424	124.1	9e-37	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1418346_60	UniRef90_UPI001D087498	407.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1418346_60	1408437.JNJN01000032_gene2312	336.0	0	Phosphoadenosine phosphosulfate reductase	N/A
Pfam	UHGV-1418346_60	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1418346_60	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1418346_60	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1418346_61	phrog_27197	66.0	5.9e-19	N/A	unknown function