UHGV-1419159 (vOTU-092569)

Viral Genome: UHGV-1419159

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1419159
vOTU ID	vOTU-092569
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0170274
Associated BioSample	SAMEA2737952
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	57.86 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	22
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9755
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	42.67
Jumbo phage	No

Genome content
Genome length (bp)	23,237
GC content	33.31%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	30
CDS density	91%
Average CDS length (bps)	701.30
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 57.86)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1419159_2	phrog_36	54.9	0.0000000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-1419159_2	UniRef90_A0A2X4N3V1	249.0	0	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-1419159_2	PF08281,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_3	phrog_940	393.5	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1419159_3	UniRef90_A0A3A4MLN5	420.0	0	Chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-1419159_3	1123302.KB904167_gene511	409.0	0	N/A	N/A
PADLOC	UHGV-1419159_3	MTase_II_00015	76.2	5.6e-22	Type II methyltransferase	RM
Pfam	UHGV-1419159_3	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1419159_3	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1419159_3	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1419159_3	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
UniRef90	UHGV-1419159_4	UniRef90_W1TW92	110.0	4.89e-28	50S ribosomal protein L21	N/A
PHROG	UHGV-1419159_5	phrog_2412	151.6	2.8026e-45	N/A	unknown function
UniRef90	UHGV-1419159_5	UniRef90_A0A4Y9JAF6	113.0	4.2e-29	Stress-induced protein	N/A
eggNOG-mapper	UHGV-1419159_5	120574.Q8SBI2_9CAUD	106.0	2.58e-27	N/A	N/A
KOfam	UHGV-1419159_6	K06909	131.5	7.8e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1419159_6	phrog_5653	134.4	4.6e-40	terminase large subunit	head and packaging
UniRef90	UHGV-1419159_6	UniRef90_A0A6H1F1I1	747.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1419159_6	562981.HMPREF0428_01824	747.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-1419159_6	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1419159_6	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1419159_6	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1419159_6	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1419159_6	PF04466,PF17289,MF_04148,TIGR01547,COG5323	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_7	phrog_64	406.1	0	portal protein	head and packaging
UniRef90	UHGV-1419159_7	UniRef90_A0A6H1F2H7	807.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1419159_7	562981.HMPREF0428_01823	807.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1419159_7	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1419159_7	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1419159_7	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_8	phrog_2841	335.7	0	minor head protein	head and packaging
UniRef90	UHGV-1419159_8	UniRef90_A0A4D6AJZ7	523.0	0	Capsid and scaffold protein	N/A
eggNOG-mapper	UHGV-1419159_8	562981.HMPREF0428_01822	484.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1419159_8	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1419159_8	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1419159_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1419159_8	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1419159_9	170187.SP_1789	51.2	0.0000000873	N/A	N/A
PHROG	UHGV-1419159_10	phrog_172	131.8	5.4e-39	head scaffolding protein	head and packaging
UniRef90	UHGV-1419159_10	UniRef90_A0A6H1F1J9	236.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419159_10	562981.HMPREF0428_01821	236.0	0	N/A	N/A
Pfam	UHGV-1419159_10	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1419159_10	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_11	phrog_544	280.5	0	major head protein	head and packaging
UniRef90	UHGV-1419159_11	UniRef90_A0A6H1EY77	355.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1419159_11	562981.HMPREF0428_01820	355.0	0	N/A	N/A
NCBIFam	UHGV-1419159_11	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1419159_11	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_13	phrog_132	66.5	3.4e-19	head-tail adaptor	connector
UniRef90	UHGV-1419159_13	UniRef90_A0A6H1EYF0	131.0	9.17e-38	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1419159_13	562981.HMPREF0428_01818	131.0	1.54e-38	N/A	N/A
Pfam	UHGV-1419159_13	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1419159_13	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_14	phrog_2168	109.0	2.2e-32	N/A	unknown function
eggNOG-mapper	UHGV-1419159_14	996306.SSUR61_0982	89.0	8.01e-22	N/A	N/A
structural_annotation	UHGV-1419159_14	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_15	phrog_5	84.6	1.1e-24	tail completion or Neck1 protein	connector
UniRef90	UHGV-1419159_15	UniRef90_A0A6H1F582	255.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1419159_15	562981.HMPREF0428_01816	257.0	0	N/A	N/A
Pfam	UHGV-1419159_15	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1419159_15	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1419159_15	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_16	phrog_78	63.2	4.2e-18	tail terminator	connector
eggNOG-mapper	UHGV-1419159_16	562981.HMPREF0428_01815	230.0	0	N/A	N/A
structural_annotation	UHGV-1419159_16	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_17	phrog_158	81.8	1.1e-23	major tail protein	tail
UniRef90	UHGV-1419159_17	UniRef90_A0A6H1F0J8	225.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1419159_17	562981.HMPREF0428_01814	225.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1419159_17	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1419159_17	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_18	phrog_183	65.6	6.8e-19	tail chaperone protein	tail
UniRef90	UHGV-1419159_18	UniRef90_UPI000D0AF502	130.0	1.13e-36	N/A	N/A
eggNOG-mapper	UHGV-1419159_18	562981.HMPREF0428_01813	181.0	0	N/A	N/A
Pfam	UHGV-1419159_18	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1419159_18	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_19	phrog_2066	63.2	4.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-1419159_19	562981.HMPREF0428_01812	155.0	0	N/A	N/A
structural_annotation	UHGV-1419159_20	TIGR04165,COG3478	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_21	phrog_1535	683.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1419159_21	UniRef90_A0A0T8EK16	724.0	0	TMP repeat family	N/A
eggNOG-mapper	UHGV-1419159_21	562981.HMPREF0428_01811	892.0	0	phage tail tape measure protein	N/A
COG	UHGV-1419159_21	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1419159_21	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_22	phrog_1194	143.0	7.39886e-43	N/A	unknown function
UniRef90	UHGV-1419159_22	UniRef90_G0IA27	186.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419159_22	562981.HMPREF0428_01810	205.0	0	N/A	N/A
Pfam	UHGV-1419159_22	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1419159_22	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_23	phrog_6616	174.1	0	tail protein	tail
eggNOG-mapper	UHGV-1419159_23	562981.HMPREF0428_01809	736.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419159_24	1321820.HMPREF1983_00921	203.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419159_25	562981.HMPREF0428_01808	65.5	0.00000000000033	N/A	N/A
PHROG	UHGV-1419159_26	phrog_1060	62.9	3.6e-18	N/A	unknown function
UniRef90	UHGV-1419159_26	UniRef90_A0A533I0A6	112.0	4.7e-29	N/A	N/A
eggNOG-mapper	UHGV-1419159_26	562981.HMPREF0428_01807	94.7	5.97e-23	N/A	N/A
Pfam	UHGV-1419159_26	PF07104	N/A	N/A	N/A	DUF1366
structural_annotation	UHGV-1419159_26	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_27	phrog_1382	66.0	2.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-1419159_27	742740.HMPREF9474_02334	51.6	0.0000000178	N/A	N/A
NCBIFam	UHGV-1419159_27	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-1419159_27	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_29	phrog_297	80.2	3e-23	holin	lysis
UniRef90	UHGV-1419159_29	UniRef90_A0A1C6KZS6	100.0	4.17e-26	Small integral membrane protein	N/A
eggNOG-mapper	UHGV-1419159_29	1225805.J7KGX7_9CAUD	92.4	1.4e-23	Bacteriophage holin	N/A
Pfam	UHGV-1419159_29	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1419159_29	TIGR01598.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-1419159_29	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1419159_30	phrog_1309	241.7	0	endolysin	lysis
UniRef90	UHGV-1419159_30	UniRef90_A0A0X8KM97	399.0	0	Cell wall hydrolase	N/A
eggNOG-mapper	UHGV-1419159_30	1321820.HMPREF1983_00914	394.0	0	CHAP domain	N/A
Pfam	UHGV-1419159_30	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1419159_30	PF08460	N/A	N/A	Bacterial SH3 domain	SH3_5
COG	UHGV-1419159_30	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1419159_30	PF08460,PF05382,TIGR02219,COG0791	N/A	N/A	N/A	N/A