UHGV-1420082 (vOTU-034727)

Viral Genome: UHGV-1420082

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1420082
vOTU ID	vOTU-034727
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0160107
Associated BioSample	SAMEA3449187
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	55.53 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.971
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	10.94
Jumbo phage	No

Genome content
Genome length (bp)	21,832
GC content	31.41%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	29
CDS density	93%
Average CDS length (bps)	703.45
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.53)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-1420082_1	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-1420082_2	phrog_6616	143.8	6.30584e-43	tail protein	tail
eggNOG-mapper	UHGV-1420082_2	1414720.CBYM010000002_gene560	186.0	0	Phage minor structural protein	N/A
COG	UHGV-1420082_2	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1420082_2	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_3	phrog_1194	116.8	9.7e-35	N/A	unknown function
UniRef90	UHGV-1420082_3	UniRef90_A0A0B3VTI7	108.0	2.7e-28	N/A	N/A
eggNOG-mapper	UHGV-1420082_3	1414720.CBYM010000002_gene561	115.0	1.15e-31	N/A	N/A
Pfam	UHGV-1420082_3	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1420082_3	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
UniRef90	UHGV-1420082_4	UniRef90_A0A1V4IQS0	72.8	0.0000000000000206	TM2 domain protein	N/A
eggNOG-mapper	UHGV-1420082_4	1499689.CCNN01000007_gene1692	68.9	0.000000000000126	TM2 domain	N/A
Pfam	UHGV-1420082_4	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
COG	UHGV-1420082_4	COG2314	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_5	phrog_1535	309.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1420082_5	UniRef90_A0A1C6JZ05	486.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1420082_5	33035.JPJF01000093_gene2243	558.0	0	phage tail tape measure protein	N/A
COG	UHGV-1420082_5	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1420082_5	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_6	phrog_8355	116.3	2.7e-35	N/A	unknown function
UniRef90	UHGV-1420082_6	UniRef90_UPI0006BBA9AA	177.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1420082_6	394503.Ccel_3283	135.0	3.34e-39	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1420082_6	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1420082_6	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_7	phrog_8300	97.3	1e-28	N/A	unknown function
eggNOG-mapper	UHGV-1420082_7	1151292.QEW_2425	116.0	1.94e-32	N/A	N/A
structural_annotation	UHGV-1420082_7	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_8	phrog_820	117.9	5.7e-35	major tail protein	tail
UniRef90	UHGV-1420082_8	UniRef90_T3DDR1	241.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-1420082_8	1151292.QEW_2426	241.0	0	N/A	N/A
structural_annotation	UHGV-1420082_8	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_9	phrog_2595	93.9	1.3e-27	head-tail connector protein	connector
UniRef90	UHGV-1420082_9	UniRef90_UPI0016BCEC89	160.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1420082_9	1151292.QEW_2427	162.0	0	N/A	N/A
Pfam	UHGV-1420082_9	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1420082_9	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_10	phrog_556	70.5	1.8e-20	minor head protein	head and packaging
UniRef90	UHGV-1420082_10	UniRef90_UPI001B1FE87F	126.0	8.11e-35	minor capsid protein	N/A
eggNOG-mapper	UHGV-1420082_10	1151292.QEW_2428	148.0	2.38221e-44	Minor capsid protein	N/A
PHROG	UHGV-1420082_11	phrog_8710	149.4	7.00649e-45	N/A	unknown function
eggNOG-mapper	UHGV-1420082_11	1282664.H354_06676	140.0	5.77055e-42	N/A	N/A
structural_annotation	UHGV-1420082_11	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_12	phrog_541	83.6	2e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-1420082_12	1304866.K413DRAFT_0783	143.0	2.05991e-42	N/A	N/A
PHROG	UHGV-1420082_13	phrog_1378	75.2	6.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-1420082_13	1280692.AUJL01000027_gene2159	76.6	1.86e-17	N/A	N/A
PHROG	UHGV-1420082_14	phrog_422	361.4	0	major head protein	head and packaging
UniRef90	UHGV-1420082_14	UniRef90_UPI00115B1F01	537.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-1420082_14	394503.Ccel_3044	518.0	0	N/A	N/A
structural_annotation	UHGV-1420082_14	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_15	phrog_2303	111.7	7e-33	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1420082_15	483218.BACPEC_01156	119.0	1.45e-30	N/A	N/A
structural_annotation	UHGV-1420082_16	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_18	phrog_6782	56.9	8.6e-26	tail fiber protein	tail
eggNOG-mapper	UHGV-1420082_18	1391647.AVSV01000022_gene2575	76.6	0.00000000000247	N/A	N/A
eggNOG-mapper	UHGV-1420082_19	411470.RUMGNA_02214	61.2	0.0000000000519	N/A	N/A
structural_annotation	UHGV-1420082_19	PF08948,MF_01537,NF007541,COG3123	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_22	phrog_581	312.3	0	minor head protein	head and packaging
UniRef90	UHGV-1420082_22	UniRef90_UPI0006BBFCF3	496.0	0	EndoU domain-containing protein	N/A
eggNOG-mapper	UHGV-1420082_22	1151292.QEW_4396	491.0	0	COG3209 Rhs family protein	N/A
Pfam	UHGV-1420082_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1420082_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1420082_22	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_23	phrog_533	262.1	0	portal protein	head and packaging
UniRef90	UHGV-1420082_23	UniRef90_A0A355D4I5	730.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1420082_23	742740.HMPREF9474_03501	535.0	0	N/A	N/A
structural_annotation	UHGV-1420082_23	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_24	phrog_30251	786.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1420082_24	UniRef90_UPI000C083AB5	788.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1420082_24	445335.CBN_1373	726.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-1420082_24	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1420082_24	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1420082_24	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1420082_24	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
KOfam	UHGV-1420082_25	K07474	135.2	8.1e-40	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1420082_25	phrog_51	155.7	0	terminase small subunit	head and packaging
UniRef90	UHGV-1420082_25	UniRef90_A0A4U9RDT2	257.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1420082_25	445335.CBN_2993	232.0	0	Terminase small subunit	N/A
Pfam	UHGV-1420082_25	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1420082_25	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1420082_25	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1420082_26	phrog_1558	169.4	0	N/A	unknown function
UniRef90	UHGV-1420082_26	UniRef90_A0A6P1YDM0	120.0	3.61e-31	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1420082_26	1262449.CP6013_3188	274.0	0	N/A	N/A
structural_annotation	UHGV-1420082_26	TIGR01637	N/A	N/A	N/A	N/A
KOfam	UHGV-1420082_27	K06919	71.6	9.6e-21	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-1420082_27	phrog_6088	302.8	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1420082_27	UniRef90_UPI0013626276	587.0	0	phage/plasmid primase, P4 family	N/A
eggNOG-mapper	UHGV-1420082_27	573061.Clocel_0168	278.0	0	DNA primase	N/A
PADLOC	UHGV-1420082_27	drt-cluster192	47.4	0.00000000000013	DRT	DRT
Pfam	UHGV-1420082_27	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
Pfam	UHGV-1420082_27	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-1420082_27	PF19263	N/A	N/A	N/A	DUF5906
NCBIFam	UHGV-1420082_27	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1420082_27	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
KOfam	UHGV-1420082_28	K22300	52.7	0.0000000000000073	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1420082_28	phrog_3	46.5	0.0000000000012	transcriptional repressor	transcription regulation
UniRef90	UHGV-1420082_28	UniRef90_A0A2G7HJG9	65.1	0.000000000127	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1420082_28	1121115.AXVN01000105_gene592	55.8	0.000000257	Cro/C1-type HTH DNA-binding domain	N/A
PADLOC	UHGV-1420082_28	retron_type_VI_hth_cluster2_1	40.2	0.000000000096	N/A	Retron
Pfam	UHGV-1420082_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1420082_28	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1420082_28	PF01381,MF_02017,NF041951,COG1476	N/A	N/A	N/A	N/A