UHGV-1420317 (vOTU-034732)

Viral Genome: UHGV-1420317

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1420317
vOTU ID	vOTU-034732
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0244694
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	88.16 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9793
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.27
Jumbo phage	No

Genome content
Genome length (bp)	35,900
GC content	41.93%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	59
CDS density	91%
Average CDS length (bps)	551.54
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 88.16)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1420317_1	K07273	150.8	1.12104e-44	acm; lysozyme	N/A
PHROG	UHGV-1420317_1	phrog_291	141.4	6.8005e-42	endolysin	lysis
UniRef90	UHGV-1420317_1	UniRef90_A0A7U9QWG5	441.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1420317_1	97139.C824_02634	159.0	3.26503e-43	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1420317_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1420317_1	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1420317_1	PF01183,PF01471,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_3	phrog_17196	105.7	5e-31	kinase	other
eggNOG-mapper	UHGV-1420317_3	1235790.C805_00090	137.0	7.99e-34	N/A	N/A
structural_annotation	UHGV-1420317_3	PF13619	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_5	phrog_18190	596.4	0	N/A	unknown function
UniRef90	UHGV-1420317_5	UniRef90_UPI001D0767E1	519.0	0	gp58-like family protein	N/A
eggNOG-mapper	UHGV-1420317_5	1235790.C805_00089	351.0	0	N/A	N/A
structural_annotation	UHGV-1420317_5	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_6	phrog_1194	58.9	8.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-1420317_6	397290.C810_05238	51.2	0.00000284	N/A	N/A
Pfam	UHGV-1420317_6	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1420317_6	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_7	phrog_1535	141.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1420317_7	1280692.AUJL01000027_gene2150	133.0	2.14e-29	phage tail tape measure protein	N/A
COG	UHGV-1420317_7	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_8	phrog_706	120.3	1.3e-35	N/A	unknown function
UniRef90	UHGV-1420317_8	UniRef90_UPI001C0F2CC6	191.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1420317_8	411459.RUMOBE_01383	178.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1420317_8	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1420317_8	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_9	phrog_11299	117.1	1.2e-34	N/A	unknown function
eggNOG-mapper	UHGV-1420317_9	411459.RUMOBE_01382	103.0	2.38e-26	N/A	N/A
structural_annotation	UHGV-1420317_9	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_10	phrog_3099	137.0	1.10001e-40	N/A	unknown function
UniRef90	UHGV-1420317_10	UniRef90_A0A7M3SAI1	113.0	5.73e-28	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1420317_10	1160721.RBI_II00532	135.0	2.01e-38	N/A	N/A
structural_annotation	UHGV-1420317_10	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_11	phrog_3266	71.9	7.1e-21	tail completion	connector
eggNOG-mapper	UHGV-1420317_11	476272.RUMHYD_01781	171.0	0	N/A	N/A
structural_annotation	UHGV-1420317_11	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_12	phrog_3366	97.6	1.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-1420317_12	476272.RUMHYD_01779	142.0	3.08005e-41	N/A	N/A
structural_annotation	UHGV-1420317_12	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_13	phrog_18218	134.2	3.7e-40	N/A	unknown function
UniRef90	UHGV-1420317_13	UniRef90_A0A3D0FFR6	136.0	1.3e-39	Ribonuclease	N/A
eggNOG-mapper	UHGV-1420317_13	411902.CLOBOL_03424	84.3	9.2e-20	N/A	N/A
structural_annotation	UHGV-1420317_13	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_14	phrog_541	87.3	1.2e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-1420317_14	397290.C810_05226	106.0	8.23e-27	N/A	N/A
PHROG	UHGV-1420317_15	phrog_544	154.3	0	major head protein	head and packaging
UniRef90	UHGV-1420317_15	UniRef90_A0A810PZM2	313.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1420317_15	476272.RUMHYD_02854	196.0	0	N/A	N/A
structural_annotation	UHGV-1420317_15	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_16	phrog_194	81.1	1.8e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-1420317_16	UniRef90_UPI001D14C9C8	130.0	1.88e-34	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1420317_16	411460.RUMTOR_02088	105.0	9.06e-26	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1420317_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1420317_16	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_17	phrog_28802	93.5	9.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-1420317_17	476272.RUMHYD_01772	98.2	9.45e-24	N/A	N/A
PHROG	UHGV-1420317_19	phrog_16490	116.8	6.7e-35	N/A	unknown function
eggNOG-mapper	UHGV-1420317_19	476272.RUMHYD_01770	94.7	9.34e-21	N/A	N/A
PHROG	UHGV-1420317_20	phrog_22984	67.7	1.6e-19	N/A	unknown function
PHROG	UHGV-1420317_21	phrog_21718	95.6	3.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-1420317_21	397290.C810_05210	94.0	3.27e-22	N/A	N/A
PHROG	UHGV-1420317_22	phrog_37604	119.9	7.2e-36	N/A	unknown function
eggNOG-mapper	UHGV-1420317_22	457412.RSAG_01109	117.0	1.18e-31	N/A	N/A
PHROG	UHGV-1420317_23	phrog_3754	97.0	6.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-1420317_23	476272.RUMHYD_01764	133.0	1.39e-38	N/A	N/A
PHROG	UHGV-1420317_24	phrog_581	219.8	0	minor head protein	head and packaging
UniRef90	UHGV-1420317_24	UniRef90_A0A1K1N983	153.0	1.19e-37	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1420317_24	1235790.C805_00050	235.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1420317_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1420317_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1420317_24	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_25	phrog_556	59.5	4.3e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-1420317_25	1235790.C805_00048	105.0	4.21e-26	N/A	N/A
Pfam	UHGV-1420317_25	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1420317_25	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_26	phrog_533	288.9	0	portal protein	head and packaging
UniRef90	UHGV-1420317_26	UniRef90_A0A1C5MB20	531.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1420317_26	33035.JPJF01000106_gene3135	460.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1420317_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1420317_27	K06909	420.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1420317_27	phrog_3717	178.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1420317_27	UniRef90_A0A1C7I418	582.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1420317_27	33035.JPJF01000106_gene3136	577.0	0	Terminase small subunit	N/A
Pfam	UHGV-1420317_27	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1420317_27	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1420317_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1420317_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1420317_27	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_29	phrog_2579	47.7	0.00000000000019	ParB C-terminal domain	DNA, RNA and nucleotide metabolism
KOfam	UHGV-1420317_30	K03497	54.0	0.0000000000000033	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1420317_30	phrog_940	340.4	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1420317_30	UniRef90_UPI00190E9E57	423.0	0	N/A	N/A
eggNOG-mapper	UHGV-1420317_30	1232449.BAHV02000018_gene1534	372.0	0	N/A	N/A
PADLOC	UHGV-1420317_30	MTase_II_00015	93.7	2.8e-27	Type II methyltransferase	RM
Pfam	UHGV-1420317_30	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1420317_30	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1420317_30	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1420317_30	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1420317_32	478749.BRYFOR_07594	52.4	0.00000104	N/A	N/A
KOfam	UHGV-1420317_33	K06223	235.1	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1420317_33	phrog_56	191.1	0	DNA methyltransferase	other
UniRef90	UHGV-1420317_33	UniRef90_A0A3R5ZUS2	503.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-1420317_33	411468.CLOSCI_00302	437.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1420317_33	MTase_II_00030	261.6	0	Type II methyltransferase	RM
Pfam	UHGV-1420317_33	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-1420317_33	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-1420317_33	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_34	phrog_10867	57.2	2.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1420317_34	411470.RUMGNA_00209	61.6	0.00000000000697	N/A	N/A
UniRef90	UHGV-1420317_36	UniRef90_UPI0018C75AF4	97.1	3.15e-25	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-1420317_36	NF007260	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1420317_38	665950.HMPREF1025_02540	56.6	0.00000000826	N/A	N/A
UniRef90	UHGV-1420317_39	UniRef90_UPI001D07A23A	245.0	0	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-1420317_39	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1420317_40	K00558	40.8	0.000000000019	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1420317_40	phrog_17284	65.7	4.6e-19	N/A	unknown function
UniRef90	UHGV-1420317_40	UniRef90_K1TAJ0	120.0	5.39e-32	Cytosine-specific methyltransferase NlaX (M.NlaX) (Fragment)	N/A
eggNOG-mapper	UHGV-1420317_40	526218.Sterm_2854	79.7	8.17e-16	PFAM C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1420317_40	oMTase_00023	53.8	3.3e-16	orphan methyltransferase	RM
Pfam	UHGV-1420317_40	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1420317_40	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
UniRef90	UHGV-1420317_41	UniRef90_UPI001D094304	166.0	0	DNA cytosine methyltransferase	N/A
COG	UHGV-1420317_41	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
UniRef90	UHGV-1420317_42	UniRef90_A0A1Q6KI63	107.0	3.72e-25	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1420317_42	397290.C810_05213	67.0	0.0000000000311	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-1420317_42	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-1420317_43	K00571	130.9	1.2e-38	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1420317_43	phrog_23224	148.4	1.82169e-44	DNA methyltransferase	other
UniRef90	UHGV-1420317_43	UniRef90_A0A3R6JG61	459.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1420317_43	981335.G4W934_9CAUD	218.0	0	N-methyltransferase activity	N/A
PADLOC	UHGV-1420317_43	MTase_II_00172	113.9	1.8e-33	Type II methyltransferase	RM
Pfam	UHGV-1420317_43	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-1420317_43	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_45	phrog_18361	129.2	2.2e-39	N/A	unknown function
UniRef90	UHGV-1420317_45	UniRef90_A0A4P6LRJ9	137.0	9.51e-38	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1420317_45	411468.CLOSCI_00298	137.0	2.92e-38	N/A	N/A
UniRef90	UHGV-1420317_47	UniRef90_A0A6L5YG37	142.0	5.67946e-42	N/A	N/A
eggNOG-mapper	UHGV-1420317_47	1232453.BAIF02000057_gene1153	50.1	0.00000985	N/A	N/A
Pfam	UHGV-1420317_47	PF04448	N/A	N/A	N/A	DUF551
eggNOG-mapper	UHGV-1420317_48	397290.C810_01492	52.0	0.000003	N/A	N/A
PHROG	UHGV-1420317_51	phrog_19106	316.1	0	N/A	unknown function
UniRef90	UHGV-1420317_51	UniRef90_R7BHG7	267.0	0	GIY-YIG domain-containing protein	N/A
eggNOG-mapper	UHGV-1420317_51	658655.HMPREF0988_00875	249.0	0	N/A	N/A
structural_annotation	UHGV-1420317_51	TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_52	phrog_15768	98.4	9.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-1420317_52	886379.AEWI01000001_gene1766	157.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-1420317_52	PF01978,MF_01819,TIGR01610,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-1420317_53	phrog_7566	80.9	1.1e-23	N/A	unknown function
UniRef90	UHGV-1420317_53	UniRef90_A0A3B9CDC4	193.0	0	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1420317_53	1304866.K413DRAFT_1198	75.1	2.12e-16	N/A	N/A
PHROG	UHGV-1420317_54	phrog_72	60.3	3.3e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1420317_54	411490.ANACAC_00804	140.0	1.86e-39	N/A	N/A
structural_annotation	UHGV-1420317_54	PF05772,NF007281	N/A	N/A	N/A	N/A
UniRef90	UHGV-1420317_55	UniRef90_A0A3R6H986	308.0	0	N/A	N/A
eggNOG-mapper	UHGV-1420317_55	33035.JPJF01000135_gene5082	267.0	0	N/A	N/A
Pfam	UHGV-1420317_55	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1420317_55	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1420317_56	33035.JPJF01000135_gene5083	59.7	0.0000000000667	N/A	N/A
KOfam	UHGV-1420317_59	K16628	50.3	0.0000000000000087	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1420317_59	phrog_4433	184.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1420317_59	573061.Clocel_3578	57.0	0.000000573	regulation of DNA-templated transcription, elongation	N/A
Pfam	UHGV-1420317_59	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1420317_59	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A