UHGV-1420323 (vOTU-134553)

Viral Genome: UHGV-1420323

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1420323
vOTU ID	vOTU-134553
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0160627
Associated BioSample	SAMEA2738011
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	65.83 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	28
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9783
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	42.38
Jumbo phage	No

Genome content
Genome length (bp)	21,903
GC content	40.30%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	35
CDS density	95%
Average CDS length (bps)	596.14
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1420323_1	phrog_6151	154.7	0	DNA methyltransferase	other
UniRef90	UHGV-1420323_1	UniRef90_F9P1Q8	178.0	0	Methyltransferase domain protein	N/A
eggNOG-mapper	UHGV-1420323_1	1123298.KB904077_gene448	179.0	0	methyltransferase	N/A
PADLOC	UHGV-1420323_1	oMTase_00019	185.6	0	orphan methyltransferase	RM
COG	UHGV-1420323_1	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-1420323_1	PF01555,NF008242	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_2	phrog_1174	130.4	2.8e-39	N/A	unknown function
UniRef90	UHGV-1420323_2	UniRef90_A0A654XP97	150.0	0	N/A	N/A
eggNOG-mapper	UHGV-1420323_2	768726.HMPREF9178_1079	150.0	0	N/A	N/A
PHROG	UHGV-1420323_3	phrog_11897	197.7	0	N/A	unknown function
UniRef90	UHGV-1420323_3	UniRef90_A0A4V0E3L2	180.0	0	N/A	N/A
PHROG	UHGV-1420323_4	phrog_1992	152.3	1.4013e-45	MazG-like pyrophosphatase	other
UniRef90	UHGV-1420323_4	UniRef90_A0A0A0YRU9	292.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1420323_4	888049.HMPREF8578_0682	311.0	0	Mazg nucleotide pyrophosphohydrolase	N/A
Pfam	UHGV-1420323_4	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1420323_4	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1420323_4	PF08761,MF_01020,NF007113,COG4508	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_5	phrog_121	127.1	9.7e-38	N/A	unknown function
UniRef90	UHGV-1420323_5	UniRef90_UPI000FC165E5	179.0	0	N/A	N/A
eggNOG-mapper	UHGV-1420323_5	1005705.HMPREF9967_1027	71.6	0.000000000000367	N/A	N/A
Pfam	UHGV-1420323_5	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1420323_5	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_6	phrog_2003	179.6	0	N/A	unknown function
UniRef90	UHGV-1420323_6	UniRef90_UPI000AB188AB	142.0	1.68997e-41	N/A	N/A
PHROG	UHGV-1420323_7	phrog_33566	165.4	0	N/A	unknown function
UniRef90	UHGV-1420323_7	UniRef90_A0A139PKF0	148.0	7.00649e-45	N/A	N/A
KOfam	UHGV-1420323_8	K07451	40.0	0.000000000065	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1420323_8	phrog_2118	125.6	3.5e-37	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1420323_8	UniRef90_A0A559GTN9	229.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1420323_8	157924.Q7Y4J8_9CAUD	223.0	0	HNH endonuclease	N/A
Pfam	UHGV-1420323_8	PF14279	N/A	N/A	HNH endonuclease	HNH_5
structural_annotation	UHGV-1420323_8	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_9	phrog_884	108.1	3.6e-32	N/A	unknown function
UniRef90	UHGV-1420323_9	UniRef90_Q7Y4J7	150.0	1.4013e-45	Gp27	N/A
eggNOG-mapper	UHGV-1420323_9	585203.SMSK564_1298	120.0	7.87e-35	N/A	N/A
Pfam	UHGV-1420323_9	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-1420323_9	PF07116,COG3585	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_10	phrog_7626	145.2	8.82818e-44	N/A	unknown function
KOfam	UHGV-1420323_11	K22300	42.9	0.0000000000094	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1420323_11	phrog_8	60.9	2.7e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1420323_11	UniRef90_A0A0F2DJV2	218.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1420323_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1420323_11	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1420323_11	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_12	phrog_36	77.7	1.6e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1420323_12	UniRef90_E6KKC4	254.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-1420323_12	1123315.AUIP01000003_gene229	87.8	2.16e-20	Transcriptional regulator, RinA family	N/A
NCBIFam	UHGV-1420323_12	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1420323_12	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1420323_13	K04763	103.8	2e-30	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1420323_13	phrog_216	187.4	0	integrase	integration and excision
UniRef90	UHGV-1420323_13	UniRef90_A0A4D6B299	357.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-1420323_13	644007.C5J955_9CAUD	358.0	0	Phage integrase family	N/A
Pfam	UHGV-1420323_13	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-1420323_13	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_14	phrog_119	70.5	2.4e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1420323_14	UniRef90_A0A062WSH4	224.0	0	Bacteriophage nuclease	N/A
eggNOG-mapper	UHGV-1420323_14	888049.HMPREF8578_0692	224.0	0	endonuclease activity	N/A
COG	UHGV-1420323_14	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1420323_15	phrog_361	153.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-1420323_15	UniRef90_A0A414CIM9	234.0	0	POU-specific domain-containing protein	N/A
eggNOG-mapper	UHGV-1420323_15	1005705.HMPREF9967_1038	240.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1420323_15	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1420323_15	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1420323_15	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_16	phrog_9	332.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1420323_16	UniRef90_A0A7G1JM49	1157.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1420323_16	1316408.HSISM1_1051	1160.0	0	Terminase	N/A
Pfam	UHGV-1420323_16	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1420323_16	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1420323_16	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1420323_16	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_17	phrog_2955	122.3	1e-36	N/A	unknown function
UniRef90	UHGV-1420323_17	UniRef90_A0A062WVS8	118.0	2.07e-33	N/A	N/A
PHROG	UHGV-1420323_18	phrog_12	192.0	0	portal protein	head and packaging
UniRef90	UHGV-1420323_18	UniRef90_UPI001CBC02E6	718.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1420323_18	888049.HMPREF8578_0696	776.0	0	Phage portal protein	N/A
Pfam	UHGV-1420323_18	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1420323_18	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1420323_18	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1420323_18	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1420323_19	K06904	136.3	2.69999e-40	N/A	N/A
PHROG	UHGV-1420323_19	phrog_80	167.7	0	head maturation protease	head and packaging
UniRef90	UHGV-1420323_19	UniRef90_E6KKD2	380.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1420323_19	644007.C5J962_9CAUD	383.0	0	peptidase activity	N/A
Pfam	UHGV-1420323_19	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1420323_19	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
structural_annotation	UHGV-1420323_19	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_20	phrog_10	158.7	0	major head protein	head and packaging
UniRef90	UHGV-1420323_20	UniRef90_E6KKD3	632.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-1420323_20	888049.HMPREF8578_0698	632.0	0	capsid protein	N/A
Pfam	UHGV-1420323_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1420323_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1420323_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1420323_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_21	phrog_390	90.1	1.3e-26	Arc-like repressor	transcription regulation
UniRef90	UHGV-1420323_21	UniRef90_A0A0P0N6K2	87.4	2.04e-20	Phage transcriptional terminator	N/A
PHROG	UHGV-1420323_22	phrog_2550	140.1	2.49992e-42	N/A	unknown function
UniRef90	UHGV-1420323_22	UniRef90_A0A081R3E6	181.0	0	Prophage pi2 protein 35	N/A
eggNOG-mapper	UHGV-1420323_22	888049.HMPREF8578_0700	179.0	0	N/A	N/A
structural_annotation	UHGV-1420323_22	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_23	phrog_1951	136.4	5.49996e-41	head-tail adaptor	connector
UniRef90	UHGV-1420323_23	UniRef90_UPI000B58A5F0	181.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1420323_23	888049.HMPREF8578_0701	193.0	0	head-tail adaptor	N/A
NCBIFam	UHGV-1420323_23	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1420323_23	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1420323_23	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_24	phrog_5	45.8	0.0000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-1420323_24	UniRef90_A0A098ANM6	186.0	0	Bacteriophage pi2 protein 37	N/A
eggNOG-mapper	UHGV-1420323_24	644007.C5J967_9CAUD	186.0	0	exonuclease activity	N/A
Pfam	UHGV-1420323_24	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1420323_24	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_25	phrog_78	47.4	0.00000000000037	tail terminator	connector
UniRef90	UHGV-1420323_25	UniRef90_T0U477	154.0	0	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1420323_25	644007.C5J968_9CAUD	201.0	0	aminopeptidase activity	N/A
structural_annotation	UHGV-1420323_25	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_26	phrog_88	162.2	0	major tail protein	tail
UniRef90	UHGV-1420323_26	UniRef90_E6KKD9	387.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1420323_26	888049.HMPREF8578_0704	387.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1420323_26	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1420323_26	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_27	phrog_709	147.0	4.76441e-44	N/A	unknown function
UniRef90	UHGV-1420323_27	UniRef90_A0A0E4CSV4	182.0	0	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-1420323_27	644007.C5J970_9CAUD	276.0	0	N/A	N/A
structural_annotation	UHGV-1420323_27	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_28	phrog_58	279.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1420323_28	UniRef90_A0A0F3HL36	1087.0	0	Chromosome partition protein Smc	N/A
eggNOG-mapper	UHGV-1420323_28	888049.HMPREF8578_0706	1103.0	0	Phage tail tape measure protein	N/A
COG	UHGV-1420323_28	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-1420323_28	PF10145,MF_04138,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_29	phrog_33	55.0	3.9e-16	distal tail protein Dit	tail
UniRef90	UHGV-1420323_29	UniRef90_A0A1F0TGE5	442.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1420323_29	888049.HMPREF8578_0707	461.0	0	N/A	N/A
structural_annotation	UHGV-1420323_29	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_30	phrog_1210	611.6	0	PblB-type receptor binding	other
UniRef90	UHGV-1420323_30	UniRef90_UPI00066E8A97	1818.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1420323_30	888049.HMPREF8578_0708	1464.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1420323_30	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1420323_30	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1420323_30	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1420323_30	PF14594,PF00629,TIGR01665,TIGR04362,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_31	phrog_12683	100.2	1.1e-29	N/A	unknown function
UniRef90	UHGV-1420323_31	UniRef90_A0A081R6K4	87.0	3.53e-21	ATP synthase F0 sector subunit C	N/A
eggNOG-mapper	UHGV-1420323_31	1095737.HMPREF1110_1748	89.0	1.02e-22	N/A	N/A
PHROG	UHGV-1420323_32	phrog_1554	244.9	0	N/A	unknown function
UniRef90	UHGV-1420323_32	UniRef90_A0A139Q9H9	220.0	0	N/A	N/A
eggNOG-mapper	UHGV-1420323_32	1035189.HMPREF9954_1920	329.0	0	N/A	N/A
structural_annotation	UHGV-1420323_32	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_33	phrog_1296	108.5	1.9e-32	holin	lysis
UniRef90	UHGV-1420323_33	UniRef90_A0A139NAW6	141.0	4.62008e-42	Phage holin	N/A
PHROG	UHGV-1420323_34	phrog_297	66.4	4.3e-19	holin	lysis
UniRef90	UHGV-1420323_34	UniRef90_E6KJ35	143.0	3.29305e-43	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1420323_34	1282664.H354_07765	146.0	2.8026e-45	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1420323_34	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1420323_34	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1420323_34	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1420323_34	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1420323_35	phrog_1110	81.6	9.7e-24	endolysin	lysis
UniRef90	UHGV-1420323_35	UniRef90_UPI000AD0C894	112.0	9.69e-31	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1420323_35	1282664.H354_06746	134.0	7.85e-38	N-acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-1420323_35	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A