UHGV-1420603 (vOTU-018927)

Viral Genome: UHGV-1420603

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1420603
vOTU ID	vOTU-018927
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0152641
Associated BioSample	SAMN02334274
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	55.83 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9786
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	20.16
Jumbo phage	No

Genome content
Genome length (bp)	20,845
GC content	45.18%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	21
CDS density	92%
Average CDS length (bps)	914.57
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1420603_1	phrog_1281	124.9	3.6e-37	N/A	unknown function
UniRef90	UHGV-1420603_1	UniRef90_A0A1C7I6F1	317.0	0	N/A	N/A
eggNOG-mapper	UHGV-1420603_1	411459.RUMOBE_01368	225.0	0	Phage-associated protein	N/A
Pfam	UHGV-1420603_1	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-1420603_1	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1420603_1	PF13274,COG3600	N/A	N/A	N/A	N/A
PHROG	UHGV-1420603_3	phrog_119	47.6	0.00000000000019	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1420603_3	UniRef90_A0A174XSZ8	129.0	1.06e-36	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1420603_3	318464.IO99_13775	123.0	3.04e-35	HNH nucleases	N/A
COG	UHGV-1420603_3	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1420603_4	phrog_1066	89.5	2.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-1420603_4	1235793.C809_01916	187.0	0	N/A	N/A
structural_annotation	UHGV-1420603_4	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1420603_5	phrog_9	395.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1420603_5	UniRef90_UPI00148AEB9A	1097.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1420603_5	1235793.C809_01917	778.0	0	Phage Terminase	N/A
Pfam	UHGV-1420603_5	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1420603_5	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1420603_5	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1420603_5	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1420603_7	phrog_12	188.5	0	portal protein	head and packaging
UniRef90	UHGV-1420603_7	UniRef90_UPI00148B140C	815.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1420603_7	1235793.C809_01918	595.0	0	Phage portal protein	N/A
Pfam	UHGV-1420603_7	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1420603_7	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1420603_7	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1420603_8	K01358	128.0	9.2e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1420603_8	phrog_94	191.8	0	head maturation protease	head and packaging
UniRef90	UHGV-1420603_8	UniRef90_UPI00148AFF63	443.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1420603_8	1235793.C809_01919	265.0	0	Clp protease	N/A
Pfam	UHGV-1420603_8	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1420603_8	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1420603_8	PF00574,MF_00444,NF011091,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1420603_9	phrog_10	168.0	0	major head protein	head and packaging
UniRef90	UHGV-1420603_9	UniRef90_UPI00148B248C	756.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1420603_9	1235793.C809_01920	419.0	0	Phage capsid family	N/A
Pfam	UHGV-1420603_9	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1420603_9	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1420603_9	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1420603_9	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1420603_10	phrog_5223	66.2	3.1e-19	neck protein	connector
UniRef90	UHGV-1420603_10	UniRef90_A0A7X6Q432	84.7	2.53e-19	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1420603_10	1094508.Tsac_2423	72.0	0.00000000000000392	N/A	N/A
PHROG	UHGV-1420603_11	phrog_1951	53.0	7e-16	head-tail adaptor	connector
UniRef90	UHGV-1420603_11	UniRef90_A0A2V2GTA0	53.5	0.000000532	Phage head-tail adapter protein	N/A
structural_annotation	UHGV-1420603_11	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1420603_12	phrog_5	40.3	0.000000000055	tail completion or Neck1 protein	connector
UniRef90	UHGV-1420603_12	UniRef90_UPI00148AE38B	254.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1420603_12	411459.RUMOBE_00932	91.3	1.82e-21	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-1420603_12	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1420603_12	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1420603_13	498761.HM1_2876	67.0	0.000000000000816	N/A	N/A
structural_annotation	UHGV-1420603_13	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1420603_14	phrog_88	116.9	1.5e-34	major tail protein	tail
UniRef90	UHGV-1420603_14	UniRef90_UPI00148B0F18	363.0	0	major tail protein	N/A
eggNOG-mapper	UHGV-1420603_14	1235792.C808_03059	239.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1420603_14	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1420603_14	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1420603_14	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1420603_15	1235792.C808_03058	154.0	0	N/A	N/A
structural_annotation	UHGV-1420603_15	PF11836	N/A	N/A	N/A	N/A
KOfam	UHGV-1420603_17	K20282	44.4	0.00000000000041	GCC2; GRIP and coiled-coil domain-containing protein 2	N/A
PHROG	UHGV-1420603_17	phrog_5218	432.2	0	N/A	unknown function
UniRef90	UHGV-1420603_17	UniRef90_UPI0011DE5327	1624.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1420603_17	1235792.C808_03050	777.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-1420603_17	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-1420603_17	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1420603_17	PF10145,PF05384,NF033930,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1420603_18	phrog_33	76.0	7.7e-22	distal tail protein Dit	tail
UniRef90	UHGV-1420603_18	UniRef90_UPI00138FB3D0	452.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1420603_18	1235798.C817_04593	218.0	0	phage tail	N/A
NCBIFam	UHGV-1420603_18	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1420603_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1420603_18	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1420603_19	phrog_13289	434.7	0	tail protein	tail
UniRef90	UHGV-1420603_19	UniRef90_A0A4P6LSM5	1950.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1420603_19	1235798.C817_02568	538.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1420603_19	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1420603_19	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1420603_19	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-1420603_19	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1420603_21	phrog_16573	48.6	0.000000000000045	N/A	unknown function
eggNOG-mapper	UHGV-1420603_21	33035.JPJF01000043_gene1001	186.0	0	N/A	N/A