UHGV-1421006 (vOTU-022945)

Viral Genome: UHGV-1421006

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1421006
vOTU ID	vOTU-022945
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0160211
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.79 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9816
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.15
Jumbo phage	No

Genome content
Genome length (bp)	21,846
GC content	51.08%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	32
CDS density	93%
Average CDS length (bps)	636.75
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1421006_2	411902.CLOBOL_06768	55.1	0.00000015	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-1421006_2	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
KOfam	UHGV-1421006_3	K00390	58.0	9.6e-17	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1421006_3	phrog_424	76.2	2.5e-22	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1421006_3	UniRef90_UPI0004E26DB4	283.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1421006_3	1408437.JNJN01000032_gene2312	283.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1421006_3	BrxP_00001	47.3	0.000000000000096	BrxP	BREX
Pfam	UHGV-1421006_3	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1421006_3	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1421006_3	PF01507,MF_00063,NF002537,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1421006_4	K01160	47.2	0.0000000000006	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1421006_4	phrog_34	51.5	0.00000000000002	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1421006_4	UniRef90_A0A379C663	131.0	6.79e-37	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1421006_4	875454.BAEW01000002_gene491	124.0	7.74e-35	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1421006_4	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1421006_4	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1421006_4	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_5	phrog_2245	53.0	0.0000000000000061	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1421006_8	UniRef90_UPI00156FA052	110.0	5.82e-29	N/A	N/A
eggNOG-mapper	UHGV-1421006_8	1395587.P364_0110505	75.9	3.43e-16	N/A	N/A
structural_annotation	UHGV-1421006_8	PF16475	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_13	phrog_11237	82.6	5.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-1421006_13	610130.Closa_0738	101.0	6.25e-26	N/A	N/A
structural_annotation	UHGV-1421006_13	NF009167	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_14	phrog_606	95.1	7e-28	terminase small subunit	head and packaging
UniRef90	UHGV-1421006_14	UniRef90_UPI00195648BB	181.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1421006_14	397290.C810_05185	155.0	0	DNA-packaging protein gp3	N/A
Pfam	UHGV-1421006_14	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1421006_14	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1421006_15	K06909	397.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1421006_15	phrog_3717	158.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1421006_15	UniRef90_UPI001C3B9235	628.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1421006_15	411471.SUBVAR_06507	572.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1421006_15	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1421006_15	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1421006_15	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1421006_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1421006_15	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_16	phrog_64	173.1	0	portal protein	head and packaging
UniRef90	UHGV-1421006_16	UniRef90_UPI0018A8A301	613.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1421006_16	673376.F2VHW1_9CAUD	212.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1421006_16	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1421006_16	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_18	phrog_115	111.0	1.7e-32	minor head protein	head and packaging
UniRef90	UHGV-1421006_18	UniRef90_A0A7X5E1T7	417.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1421006_18	1504822.CCNO01000013_gene286	181.0	0	cell adhesion	N/A
Pfam	UHGV-1421006_18	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1421006_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421006_18	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_20	phrog_5	82.0	9.9e-24	tail completion or Neck1 protein	connector
UniRef90	UHGV-1421006_20	UniRef90_A0A3A9EIF3	184.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1421006_20	1280685.AUKC01000004_gene1630	103.0	1.37e-26	N/A	N/A
Pfam	UHGV-1421006_20	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1421006_20	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1421006_20	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421006_21	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_22	phrog_544	116.6	2.3e-34	major head protein	head and packaging
UniRef90	UHGV-1421006_22	UniRef90_A0A1C6B5R0	322.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1421006_22	476272.RUMHYD_01776	294.0	0	N/A	N/A
structural_annotation	UHGV-1421006_22	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_24	phrog_17977	77.9	8.6e-23	N/A	unknown function
UniRef90	UHGV-1421006_24	UniRef90_UPI00141211AB	90.1	5.83e-21	head-tail adaptor protein	N/A
structural_annotation	UHGV-1421006_24	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_25	phrog_17405	47.2	0.00000000000033	head protein	head and packaging
structural_annotation	UHGV-1421006_25	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_26	phrog_885	94.8	8.1e-28	major tail protein	tail
UniRef90	UHGV-1421006_26	UniRef90_A0A843J9F0	157.0	2.24208e-44	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1421006_26	1111121.HMPREF1247_0789	177.0	0	N/A	N/A
structural_annotation	UHGV-1421006_26	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_27	phrog_18646	47.0	0.00000000000046	N/A	unknown function
PHROG	UHGV-1421006_28	phrog_20920	122.2	2.1e-36	N/A	unknown function
eggNOG-mapper	UHGV-1421006_28	1536770.R50345_22870	120.0	1.64e-33	N/A	N/A
structural_annotation	UHGV-1421006_28	PF16674	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_29	phrog_6900	227.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1421006_29	UniRef90_A0A0D0SGC8	318.0	0	Phage minor tail protein	N/A
eggNOG-mapper	UHGV-1421006_29	1437608.BBIA_2554	278.0	0	phage tail tape measure protein	N/A
COG	UHGV-1421006_29	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1421006_29	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_30	phrog_33	68.7	1.5e-19	distal tail protein Dit	tail
UniRef90	UHGV-1421006_30	UniRef90_A0A2X2UUQ3	125.0	1.17e-31	Phage putative tail component	N/A
eggNOG-mapper	UHGV-1421006_30	1582149.A0A0A8WHP7_9CAUD	109.0	3.65e-26	Phage tail protein	N/A
structural_annotation	UHGV-1421006_30	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1421006_31	phrog_1067	373.8	0	minor head protein	head and packaging
UniRef90	UHGV-1421006_31	UniRef90_A0A413DNC1	503.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1421006_31	1160721.RBI_I01574	380.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1421006_31	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1421006_31	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1421006_31	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1421006_31	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-1421006_32	UniRef90_UPI000C79F998	76.6	0.0000000000135	H-type lectin domain-containing protein	N/A
structural_annotation	UHGV-1421006_32	PF10651,NF041074	N/A	N/A	N/A	N/A