UHGV-1421371 (vOTU-167255)

Viral Genome: UHGV-1421371

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1421371
vOTU ID	vOTU-167255
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0168987
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	60.63 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9817
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	16.58
Jumbo phage	No

Genome content
Genome length (bp)	23,054
GC content	38.02%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	28
CDS density	93%
Average CDS length (bps)	767.89
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 60.63)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1421371_2	phrog_8684	115.6	3.4e-34	N/A	unknown function
UniRef90	UHGV-1421371_2	UniRef90_A0A3D2KEV6	147.0	2.42425e-43	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1421371_2	411470.RUMGNA_02199	79.0	8.02e-17	N/A	N/A
Pfam	UHGV-1421371_2	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1421371_2	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_4	phrog_625	62.9	3.4e-18	N/A	unknown function
UniRef90	UHGV-1421371_4	UniRef90_A0A413YU40	229.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1421371_4	397290.C810_01502	124.0	3.97e-35	N/A	N/A
structural_annotation	UHGV-1421371_4	PF12961,COG2028	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_5	phrog_36	64.8	1.7e-18	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1421371_5	397290.C810_01391	105.0	4.12e-27	N/A	N/A
structural_annotation	UHGV-1421371_5	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-1421371_6	K07474	152.5	4.2039e-45	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1421371_6	phrog_51	161.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-1421371_6	UniRef90_A0A413YU49	371.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1421371_6	1499683.CCFF01000014_gene3916	149.0	9.94922e-43	Terminase small subunit	N/A
Pfam	UHGV-1421371_6	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1421371_6	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1421371_6	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1421371_7	K06909	93.7	2.3e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1421371_7	phrog_2	69.2	8.6e-20	terminase large subunit	head and packaging
UniRef90	UHGV-1421371_7	UniRef90_A0A413YU24	962.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1421371_7	1294142.CINTURNW_1023	518.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1421371_7	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1421371_7	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1421371_7	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_8	phrog_533	285.1	0	portal protein	head and packaging
UniRef90	UHGV-1421371_8	UniRef90_A0A413YU90	937.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1421371_8	33035.JPJF01000093_gene2257	542.0	0	N/A	N/A
structural_annotation	UHGV-1421371_8	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_9	phrog_581	240.2	0	minor head protein	head and packaging
UniRef90	UHGV-1421371_9	UniRef90_A0A1C5VPR8	978.0	0	ATPase involved in DNA repair	N/A
eggNOG-mapper	UHGV-1421371_9	33035.JPJF01000093_gene2255	440.0	0	N/A	N/A
Pfam	UHGV-1421371_9	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-1421371_9	PF18810	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2	PBECR2
COG	UHGV-1421371_9	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-1421371_9	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_10	phrog_872	81.2	1.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-1421371_10	397290.C810_05225	124.0	3.88e-35	N/A	N/A
dbAPIS	UHGV-1421371_10	APIS052	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_11	phrog_2303	133.5	1.6e-39	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1421371_11	483218.BACPEC_01156	131.0	3.1e-35	N/A	N/A
PHROG	UHGV-1421371_12	phrog_422	264.4	0	major head protein	head and packaging
UniRef90	UHGV-1421371_12	UniRef90_A0A3D5M0U8	506.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1421371_12	663278.Ethha_1589	376.0	0	N/A	N/A
structural_annotation	UHGV-1421371_12	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_13	phrog_541	68.4	1e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-1421371_13	1304866.K413DRAFT_0783	147.0	2.8026e-44	N/A	N/A
PHROG	UHGV-1421371_14	phrog_8710	126.3	1.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-1421371_14	742740.HMPREF9474_03508	125.0	1e-35	N/A	N/A
structural_annotation	UHGV-1421371_14	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_15	phrog_556	59.4	5.5e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-1421371_15	483218.BACPEC_01151	143.0	3.15993e-42	N/A	N/A
PHROG	UHGV-1421371_16	phrog_2595	78.4	7.8e-23	head-tail connector protein	connector
UniRef90	UHGV-1421371_16	UniRef90_UPI001D068DAC	134.0	6.88e-38	minor capsid protein	N/A
eggNOG-mapper	UHGV-1421371_16	742740.HMPREF9474_03510	122.0	5.79e-34	N/A	N/A
Pfam	UHGV-1421371_16	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1421371_16	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_17	phrog_820	118.0	5.4e-35	major tail protein	tail
UniRef90	UHGV-1421371_17	UniRef90_T3DDR1	174.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-1421371_17	1151292.QEW_2426	174.0	0	N/A	N/A
structural_annotation	UHGV-1421371_17	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_18	phrog_8300	66.8	2.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-1421371_18	1151292.QEW_2425	59.7	0.000000000434	N/A	N/A
structural_annotation	UHGV-1421371_18	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_19	phrog_8355	115.9	8e-35	N/A	unknown function
UniRef90	UHGV-1421371_19	UniRef90_UPI0006BBA9AA	175.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1421371_19	394503.Ccel_3036	118.0	1.28e-32	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1421371_19	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1421371_19	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_20	phrog_1535	276.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1421371_20	UniRef90_R6TDK7	350.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-1421371_20	33035.JPJF01000093_gene2243	355.0	0	phage tail tape measure protein	N/A
COG	UHGV-1421371_20	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1421371_20	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_21	phrog_1194	81.6	8.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-1421371_21	33035.JPJF01000093_gene2242	154.0	0	N/A	N/A
structural_annotation	UHGV-1421371_21	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_22	phrog_1401	66.5	3.9e-19	N/A	unknown function
UniRef90	UHGV-1421371_22	UniRef90_UPI0007099B7A	67.8	0.00000000000683	N/A	N/A
eggNOG-mapper	UHGV-1421371_22	1294142.CINTURNW_1705	58.9	0.00000000303	N/A	N/A
structural_annotation	UHGV-1421371_22	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_23	phrog_6616	159.1	0	tail protein	tail
UniRef90	UHGV-1421371_23	UniRef90_A0A8D9PGP3	750.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-1421371_23	1232453.BAIF02000058_gene1641	273.0	0	Phage minor structural protein	N/A
COG	UHGV-1421371_23	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1421371_23	PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1421371_24	phrog_2566	45.6	0.000000000001	N/A	unknown function
PHROG	UHGV-1421371_27	phrog_199	72.6	4.5e-21	holin	lysis
UniRef90	UHGV-1421371_27	UniRef90_A0A3B8UJ75	238.0	0	Holin	N/A
eggNOG-mapper	UHGV-1421371_27	483218.BACPEC_01140	216.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1421371_27	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1421371_27	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1421371_27	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1421371_27	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1421371_28	K02395	47.8	0.00000000000013	flgJ; peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-1421371_28	phrog_3513	58.1	9.6e-17	endolysin	lysis
UniRef90	UHGV-1421371_28	UniRef90_R5ZWS5	517.0	0	Peptidoglycan hydrolase	N/A
eggNOG-mapper	UHGV-1421371_28	1423724.BAMM01000042_gene2173	59.3	0.000000216	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1421371_28	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-1421371_28	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1421371_28	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1421371_28	PF08230,NF004974,COG1705	N/A	N/A	N/A	N/A