UHGV-1421388 (vOTU-163320)

Viral Genome: UHGV-1421388

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1421388
vOTU ID	vOTU-163320
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0243536
Associated BioSample	SAMEA3664683
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.52 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9787
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	19.04
Jumbo phage	No

Genome content
Genome length (bp)	35,728
GC content	35.59%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	58
CDS density	88%
Average CDS length (bps)	543.05
Total tRNA genes	3
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.52)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1421388_1	phrog_18190	469.0	0	N/A	unknown function
UniRef90	UHGV-1421388_1	UniRef90_A0A3A8WLR6	359.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1421388_1	1298920.KI911353_gene2679	196.0	0	N/A	N/A
Pfam	UHGV-1421388_1	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1421388_1	PF05113,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1421388_2	phrog_1194	65.4	7.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-1421388_2	483218.BACPEC_01144	72.0	0.0000000000000455	N/A	N/A
Pfam	UHGV-1421388_2	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1421388_2	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
KOfam	UHGV-1421388_3	K07741	62.8	1.1e-17	antB; anti-repressor protein	N/A
PHROG	UHGV-1421388_3	phrog_373	90.6	2.3e-26	anti-repressor	transcription regulation
UniRef90	UHGV-1421388_3	UniRef90_A0A416G2X7	367.0	0	AntA domain-containing protein	N/A
eggNOG-mapper	UHGV-1421388_3	552396.HMPREF0863_00756	207.0	0	P22_AR N-terminal domain	N/A
Pfam	UHGV-1421388_3	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-1421388_3	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1421388_3	PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-1421388_5	UniRef90_A0A1C5WHU9	54.7	0.0000000127	Ribbon-helix-helix protein, copG family	N/A
eggNOG-mapper	UHGV-1421388_5	663952.SDD27957_09060	50.8	0.0000000693	N/A	N/A
structural_annotation	UHGV-1421388_5	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
Pfam	UHGV-1421388_6	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
PHROG	UHGV-1421388_7	phrog_9418	124.4	5e-37	N/A	unknown function
UniRef90	UHGV-1421388_7	UniRef90_A0A318EUB9	137.0	2.21e-38	Zinc ribbon protein	N/A
eggNOG-mapper	UHGV-1421388_7	658655.HMPREF0988_00910	108.0	2.08e-28	N/A	N/A
KOfam	UHGV-1421388_8	K03529	48.6	3e-22	smc; chromosome segregation protein	N/A
PHROG	UHGV-1421388_8	phrog_28918	144.0	0	N/A	unknown function
UniRef90	UHGV-1421388_8	UniRef90_UPI001D06F8E3	253.0	0	methyl-accepting chemotaxis protein	N/A
eggNOG-mapper	UHGV-1421388_8	1298920.KI911353_gene2649	250.0	0	tape measure	N/A
COG	UHGV-1421388_8	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
KOfam	UHGV-1421388_9	K01447	90.0	3.9e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1421388_9	phrog_670	97.0	2.7e-28	endolysin	lysis
UniRef90	UHGV-1421388_9	UniRef90_A0A352SK06	258.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1421388_9	1042156.CXIVA_01560	150.0	6.29043e-42	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1421388_9	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1421388_9	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1421388_9	PF01510,PF08239,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1421388_11	phrog_36112	132.5	2.29999e-40	N/A	unknown function
UniRef90	UHGV-1421388_11	UniRef90_A0A8D9PG71	57.0	0.000000267	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-1421388_11	476272.RUMHYD_01969	135.0	1.81e-38	N/A	N/A
structural_annotation	UHGV-1421388_11	PF11836,TIGR01674	N/A	N/A	N/A	N/A
UniRef90	UHGV-1421388_12	UniRef90_R7BGF5	93.2	5.47e-21	Phage tail protein	N/A
structural_annotation	UHGV-1421388_12	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421388_13	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1421388_14	476272.RUMHYD_01963	79.0	6.63e-16	N/A	N/A
structural_annotation	UHGV-1421388_15	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1421388_16	phrog_443	58.7	1.7e-16	holin	lysis
UniRef90	UHGV-1421388_16	UniRef90_UPI000CF1F0AD	86.3	8.36e-21	holin	N/A
eggNOG-mapper	UHGV-1421388_16	411490.ANACAC_00704	89.0	9.71e-23	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1421388_16	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1421388_16	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-1421388_17	phrog_1863	49.6	0.000000000000041	N/A	unknown function
eggNOG-mapper	UHGV-1421388_17	1232452.BAIB02000007_gene1606	48.5	0.00000957	N/A	N/A
eggNOG-mapper	UHGV-1421388_18	397290.C810_01402	72.8	0.00000000000000732	N/A	N/A
Pfam	UHGV-1421388_18	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1421388_19	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-1421388_20	phrog_29	165.1	0	major head protein	head and packaging
UniRef90	UHGV-1421388_20	UniRef90_A0A173UF26	635.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-1421388_20	1347368.HG964404_gene4993	159.0	1.15047e-42	Phage major capsid protein E	N/A
Pfam	UHGV-1421388_20	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1421388_20	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1421388_21	phrog_909	82.1	5e-24	major head protein	head and packaging
UniRef90	UHGV-1421388_21	UniRef90_R7BGI8	197.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1421388_21	1078085.HMPREF1210_01145	59.3	0.000000000634	N/A	N/A
UniRef90	UHGV-1421388_22	UniRef90_R6C0B6	203.0	0	Phage capsid scaffolding protein	N/A
PHROG	UHGV-1421388_23	phrog_64	176.7	0	portal protein	head and packaging
UniRef90	UHGV-1421388_23	UniRef90_A0A3R6ASF4	784.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1421388_23	1298920.KI911353_gene2663	463.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1421388_23	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1421388_23	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421388_24	PF10122,NF041070,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-1421388_25	phrog_36	73.7	2.9e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-1421388_25	UniRef90_A0A352SH29	108.0	3.3e-28	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-1421388_25	706434.HMPREF9429_00383	74.7	0.00000000000000372	N/A	N/A
structural_annotation	UHGV-1421388_25	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1421388_26	phrog_38	175.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1421388_26	UniRef90_A0A318EQM2	532.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-1421388_26	1123263.AUKY01000015_gene1608	342.0	0	chromosome segregation	N/A
COG	UHGV-1421388_26	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421388_26	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-1421388_30	UniRef90_A0A8D9PGN8	66.2	0.00000000000123	Acetyl-coA carboxylase zinc finger domain protein	N/A
structural_annotation	UHGV-1421388_32	PF04466	N/A	N/A	N/A	N/A
PHROG	UHGV-1421388_38	phrog_1485	107.3	1.6e-31	N/A	unknown function
UniRef90	UHGV-1421388_38	UniRef90_R6M0A1	252.0	0	N/A	N/A
eggNOG-mapper	UHGV-1421388_38	1415774.U728_1099	99.4	6.11e-25	N/A	N/A
Pfam	UHGV-1421388_38	PF07659	N/A	N/A	Nucleotide modification associated domain 1	DUF1599
structural_annotation	UHGV-1421388_38	PF13384	N/A	N/A	N/A	N/A
PHROG	UHGV-1421388_40	phrog_21026	48.8	0.00000000000011	N/A	unknown function
UniRef90	UHGV-1421388_44	UniRef90_A0A8D9UIS5	97.1	5.67e-21	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1421388_44	658655.HMPREF0988_00895	81.3	9.1e-17	N/A	N/A
KOfam	UHGV-1421388_46	K07727	44.0	0.0000000000057	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-1421388_46	UniRef90_A0A1C6HAI9	116.0	1.33e-32	Predicted transcriptional regulator	N/A
eggNOG-mapper	UHGV-1421388_46	411470.RUMGNA_00075	116.0	2.23e-33	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1421388_46	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1421388_46	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1421388_52	phrog_1233	45.7	0.0000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1421388_52	658655.HMPREF0988_00914	131.0	1.88e-38	N/A	N/A
structural_annotation	UHGV-1421388_52	PF13058	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1421388_53	658655.HMPREF0988_00915	132.0	1.7e-35	N/A	N/A
PHROG	UHGV-1421388_54	phrog_20016	227.5	0	N/A	unknown function
UniRef90	UHGV-1421388_54	UniRef90_A0A285PT46	163.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1421388_54	397290.C810_05214	230.0	0	N/A	N/A
structural_annotation	UHGV-1421388_54	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1421388_55	phrog_16490	187.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1421388_55	397290.C810_01328	191.0	0	N/A	N/A
eggNOG-mapper	UHGV-1421388_57	658655.HMPREF0988_00919	101.0	1.11e-24	N/A	N/A
structural_annotation	UHGV-1421388_57	NF033819	N/A	N/A	N/A	N/A