UHGV-1421427 (vOTU-165862)

Viral Genome: UHGV-1421427

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1421427
vOTU ID	vOTU-165862
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0167627
Associated BioSample	SAMEA2737875
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	51.85 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	8
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.976
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	9.77
Jumbo phage	No

Genome content
Genome length (bp)	22,858
GC content	51.28%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	25
CDS density	91%
Average CDS length (bps)	836.28
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1421427_1	K06400	98.3	8.7e-29	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1421427_1	phrog_95	121.7	5.9e-36	integrase	integration and excision
UniRef90	UHGV-1421427_1	UniRef90_UPI001BED9623	484.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1421427_1	1321778.HMPREF1982_04183	214.0	0	N/A	N/A
Pfam	UHGV-1421427_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1421427_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
PHROG	UHGV-1421427_3	phrog_32500	50.3	0.00000000000003	N/A	unknown function
UniRef90	UHGV-1421427_3	UniRef90_A0A372V819	94.4	1.17e-23	KilA-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1421427_3	411468.CLOSCI_02785	74.3	0.00000000000000752	N/A	N/A
Pfam	UHGV-1421427_3	PF04383	N/A	N/A	KilA-N domain	KilA-N
UniRef90	UHGV-1421427_5	UniRef90_A0A329UDT7	582.0	0	Zinc chelation protein SecC	N/A
eggNOG-mapper	UHGV-1421427_5	457412.RSAG_00322	317.0	0	SEC-C Motif Domain Protein	N/A
Pfam	UHGV-1421427_5	PF02810	N/A	N/A	SEC-C motif	SEC-C
COG	UHGV-1421427_5	COG3012	N/A	N/A	N/A	N/A
KOfam	UHGV-1421427_6	K19360	80.8	1.6e-29	NPHP3; nephrocystin-3	N/A
UniRef90	UHGV-1421427_6	UniRef90_A0A416LKM1	1078.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1421427_6	1121115.AXVN01000059_gene435	1078.0	0	Tetratricopeptide repeat	N/A
Pfam	UHGV-1421427_6	PF13401	N/A	N/A	AAA domain	AAA_22
Pfam	UHGV-1421427_6	PF07719	N/A	N/A	Tetratricopeptide repeat	TPR_2
Pfam	UHGV-1421427_6	PF13424	N/A	N/A	Tetratricopeptide repeat	TPR_12
COG	UHGV-1421427_6	COG0457	N/A	N/A	Tetratricopeptide (TPR) repeat	N/A
KOfam	UHGV-1421427_7	K01448	52.3	0.0000000000000076	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1421427_7	phrog_435	87.3	2.3e-25	endolysin	lysis
UniRef90	UHGV-1421427_7	UniRef90_UPI001BF1661D	444.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1421427_7	994573.T472_0210960	137.0	1.93e-37	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-1421427_7	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1421427_7	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-1421427_7	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1421427_7	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1421427_8	phrog_199	80.1	2.4e-23	holin	lysis
UniRef90	UHGV-1421427_8	UniRef90_UPI001BEFC888	292.0	0	Phage holin family protein	N/A
eggNOG-mapper	UHGV-1421427_8	1160721.RBI_I01565	134.0	3.46e-38	Bacteriophage holin family	N/A
Pfam	UHGV-1421427_8	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1421427_8	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1421427_8	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1421427_8	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1421427_9	K01104	51.7	0.0000000000000093	E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]	N/A
UniRef90	UHGV-1421427_9	UniRef90_UPI001BF10870	1139.0	0	Tyrosine-protein phosphatase	N/A
eggNOG-mapper	UHGV-1421427_9	909613.UO65_2741	75.5	0.0000000000018	Tyrosine phosphatase family	N/A
Pfam	UHGV-1421427_9	PF13350	N/A	N/A	Tyrosine phosphatase family	Y_phosphatase3
COG	UHGV-1421427_9	COG2365	N/A	N/A	Protein tyrosine/serine phosphatase Oca4	N/A
PHROG	UHGV-1421427_11	phrog_27545	88.2	9.5e-26	N/A	unknown function
UniRef90	UHGV-1421427_11	UniRef90_A0A3D1XGA4	205.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1421427_11	478749.BRYFOR_07638	75.1	0.00000000000000904	N/A	N/A
PHROG	UHGV-1421427_13	phrog_372	221.7	0	tail protein	tail
UniRef90	UHGV-1421427_13	UniRef90_UPI001373A0FD	228.0	0	N/A	N/A
eggNOG-mapper	UHGV-1421427_13	1235802.C823_05263	212.0	0	N/A	N/A
Pfam	UHGV-1421427_13	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-1421427_13	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1421427_13	PF05895,MF_04116,NF010681,COG3401,COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-1421427_14	phrog_6616	113.2	2.7e-34	tail protein	tail
UniRef90	UHGV-1421427_14	UniRef90_R5GWP5	72.8	0.000000000633	KID repeat family protein	N/A
eggNOG-mapper	UHGV-1421427_14	469596.HMPREF9488_01318	292.0	0	N/A	N/A
structural_annotation	UHGV-1421427_14	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1421427_15	phrog_1194	121.0	4.9e-36	N/A	unknown function
UniRef90	UHGV-1421427_15	UniRef90_A0A4U9RD70	112.0	1.06e-29	Lj965 prophage protein	N/A
eggNOG-mapper	UHGV-1421427_15	1121333.JMLH01000047_gene1008	118.0	7.92e-33	N/A	N/A
Pfam	UHGV-1421427_15	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1421427_15	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1421427_16	phrog_1535	107.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1421427_16	UniRef90_A0A810PX76	250.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1421427_16	1235797.C816_04182	468.0	0	SLT domain	N/A
COG	UHGV-1421427_16	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1421427_16	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1421427_17	phrog_706	121.8	5.3e-36	N/A	unknown function
UniRef90	UHGV-1421427_17	UniRef90_UPI000682A80B	245.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1421427_17	693746.OBV_18170	231.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1421427_17	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1421427_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1421427_18	phrog_11299	89.4	4.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-1421427_18	693746.OBV_18160	107.0	4.31e-28	N/A	N/A
structural_annotation	UHGV-1421427_18	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1421427_19	phrog_3099	94.8	1e-27	N/A	unknown function
eggNOG-mapper	UHGV-1421427_19	1232443.BAIA02000078_gene23	241.0	0	N/A	N/A
structural_annotation	UHGV-1421427_19	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1421427_20	phrog_3266	57.1	2.9e-16	tail completion	connector
eggNOG-mapper	UHGV-1421427_20	1232443.BAIA02000078_gene24	161.0	0	N/A	N/A
PHROG	UHGV-1421427_21	phrog_556	71.8	7.9e-21	minor head protein	head and packaging
UniRef90	UHGV-1421427_21	UniRef90_UPI00195E1497	169.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1421427_21	1226322.HMPREF1545_00054	136.0	3.22e-39	Minor capsid protein	N/A
Pfam	UHGV-1421427_21	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1421427_21	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1421427_22	phrog_3366	85.3	6.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-1421427_22	1226322.HMPREF1545_00053	141.0	4.16998e-41	N/A	N/A
structural_annotation	UHGV-1421427_22	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1421427_23	phrog_541	106.9	1.2e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-1421427_23	411470.RUMGNA_02220	65.1	0.0000000000159	N/A	N/A
PHROG	UHGV-1421427_24	phrog_10	173.0	0	major head protein	head and packaging
UniRef90	UHGV-1421427_24	UniRef90_A0A2U1BEF2	530.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1421427_24	1226322.HMPREF1545_00050	473.0	0	Phage capsid family	N/A
Pfam	UHGV-1421427_24	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1421427_24	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1421427_24	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1421427_24	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A