UHGV-1422010 (vOTU-143743)

Viral Genome: UHGV-1422010

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1422010
vOTU ID	vOTU-143743
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0159967
Associated BioSample	SAMEA2467071
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.4 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	3
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9736
Virus hallmark genes (geNomad)	2
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	12.06
Jumbo phage	No

Genome content
Genome length (bp)	21,814
GC content	59.92%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	41
CDS density	91%
Average CDS length (bps)	484.46
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1422010_1	phrog_3584	128.0	8e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1422010_1	742738.HMPREF9460_00867	132.0	5.05e-36	N/A	N/A
eggNOG-mapper	UHGV-1422010_6	318464.IO99_07375	68.9	0.0000000000000875	N/A	N/A
structural_annotation	UHGV-1422010_8	PF02882,MF_01576,NF010775,COG0190	N/A	N/A	N/A	N/A
KOfam	UHGV-1422010_10	K01520	124.7	8.1e-37	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1422010_10	phrog_135	100.2	1.7e-29	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1422010_10	UniRef90_UPI001D07FBC5	234.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1422010_10	887929.HMP0721_1278	136.0	9.63999e-40	dUTPase	N/A
Pfam	UHGV-1422010_10	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-1422010_10	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1422010_10	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
KOfam	UHGV-1422010_11	K03111	138.1	9.3e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1422010_11	phrog_44	132.9	2.2e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1422010_11	UniRef90_UPI0012489F18	191.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1422010_11	1226322.HMPREF1545_04080	150.0	1.12104e-44	Single-strand binding protein family	N/A
Pfam	UHGV-1422010_11	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1422010_11	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1422010_11	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1422010_11	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1422010_11	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1422010_13	phrog_1374	46.9	0.00000000000031	N/A	unknown function
UniRef90	UHGV-1422010_13	UniRef90_A0A482JLT4	52.0	0.000000232	Putative membrane protein	N/A
eggNOG-mapper	UHGV-1422010_13	1519439.JPJG01000059_gene1913	53.1	0.0000000143	N/A	N/A
KOfam	UHGV-1422010_14	K02314	293.8	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1422010_14	phrog_19	244.0	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1422010_14	UniRef90_A0A3A8Z521	488.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1422010_14	1007096.BAGW01000033_gene1616	265.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-1422010_14	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1422010_14	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1422010_14	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1422010_14	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1422010_15	phrog_428	56.1	8.9e-16	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1422010_15	UniRef90_A0A8J6MF41	198.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1422010_15	1226322.HMPREF1545_00094	155.0	1.26117e-43	DnaD domain protein	N/A
Pfam	UHGV-1422010_15	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1422010_15	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1422010_15	PF20714,MF_01177,NF040582,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-1422010_17	phrog_6058	41.7	0.000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1422010_17	742738.HMPREF9460_00848	102.0	1.4e-26	N/A	N/A
structural_annotation	UHGV-1422010_17	PF12728,TIGR01764	N/A	N/A	N/A	N/A
KOfam	UHGV-1422010_21	K18830	50.2	0.00000000000005	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
UniRef90	UHGV-1422010_21	UniRef90_UPI001D061BC2	120.0	9.59e-33	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1422010_21	1235797.C816_03553	97.8	8.11e-24	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1422010_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1422010_21	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1422010_21	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1422010_23	phrog_17982	62.1	7.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-1422010_23	1151292.QEW_0647	72.4	0.000000000000131	N/A	N/A
Pfam	UHGV-1422010_23	PF14020	N/A	N/A	N/A	DUF4236
structural_annotation	UHGV-1422010_23	PF14020,PF21602	N/A	N/A	N/A	N/A
KOfam	UHGV-1422010_24	K14059	108.1	1.3e-31	int; integrase	N/A
PHROG	UHGV-1422010_24	phrog_1	145.5	4.80645e-43	integrase	integration and excision
UniRef90	UHGV-1422010_24	UniRef90_A0A3D4D8C4	356.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1422010_24	693746.OBV_19730	345.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1422010_24	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1422010_24	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1422010_24	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1422010_25	1378168.N510_03079	107.0	1.55e-25	N/A	N/A
eggNOG-mapper	UHGV-1422010_26	1408437.JNJN01000043_gene802	159.0	0	N/A	N/A
PHROG	UHGV-1422010_27	phrog_16490	186.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1422010_27	1408437.JNJN01000043_gene803	169.0	0	N/A	N/A
eggNOG-mapper	UHGV-1422010_29	445972.ANACOL_01878	74.3	0.0000000000000099	N/A	N/A
UniRef90	UHGV-1422010_31	UniRef90_UPI00164AED9E	93.2	2.36e-22	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1422010_31	1122218.KB893653_gene698	52.0	0.000000405	transcriptional regulator, XRE family	N/A
COG	UHGV-1422010_31	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1422010_31	NF040522,COG2944	N/A	N/A	N/A	N/A
Pfam	UHGV-1422010_32	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-1422010_32	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1422010_33	K01447	63.2	5.1e-18	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1422010_33	phrog_15001	162.5	0	endolysin	lysis
UniRef90	UHGV-1422010_33	UniRef90_UPI001EE14AF5	448.0	0	peptidoglycan recognition protein family protein	N/A
eggNOG-mapper	UHGV-1422010_33	552398.HMPREF0866_01156	303.0	0	Ami_2	N/A
Pfam	UHGV-1422010_33	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1422010_33	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1422010_33	PF01510,MF_04111,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1422010_36	phrog_1129	66.2	3.5e-19	holin	lysis
UniRef90	UHGV-1422010_36	UniRef90_UPI001EDED0D7	153.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1422010_36	1007096.BAGW01000032_gene1582	121.0	7.29e-35	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1422010_36	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1422010_36	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1422010_37	phrog_1863	63.9	1.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-1422010_37	748224.HMPREF9436_00408	102.0	6.67e-28	N/A	N/A
eggNOG-mapper	UHGV-1422010_38	1408437.JNJN01000040_gene189	75.1	3.69e-16	N/A	N/A
PHROG	UHGV-1422010_41	phrog_32744	362.2	0	N/A	unknown function
eggNOG-mapper	UHGV-1422010_41	1120998.AUFC01000030_gene2247	191.0	0	N/A	N/A
structural_annotation	UHGV-1422010_41	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A