UHGV-1422285 (vOTU-131506)

Viral Genome: UHGV-1422285

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1422285
vOTU ID	vOTU-131506
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0311174
Associated BioSample	SAMEA3879587
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	88 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9786
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.32
Jumbo phage	No

Genome content
Genome length (bp)	50,331
GC content	39.80%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	89
CDS density	91%
Average CDS length (bps)	514.11
Total tRNA genes	3
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1422285_3	phrog_21718	51.8	0.000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-1422285_3	397290.C810_01326	70.9	0.000000000000367	N/A	N/A
eggNOG-mapper	UHGV-1422285_4	658655.HMPREF0988_00918	51.2	0.000000168	N/A	N/A
PHROG	UHGV-1422285_5	phrog_16490	196.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1422285_5	397290.C810_01328	211.0	0	N/A	N/A
PHROG	UHGV-1422285_7	phrog_20016	222.8	0	N/A	unknown function
UniRef90	UHGV-1422285_7	UniRef90_A0A285PT46	165.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1422285_7	397290.C810_05214	229.0	0	N/A	N/A
structural_annotation	UHGV-1422285_7	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1422285_8	658655.HMPREF0988_00915	131.0	3.7e-35	N/A	N/A
PHROG	UHGV-1422285_9	phrog_1233	57.9	2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1422285_9	397290.C810_01336	101.0	1.78e-26	N/A	N/A
COG	UHGV-1422285_10	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-1422285_14	phrog_11100	100.8	8.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-1422285_14	1283077.M1ICI7_9CAUD	52.4	0.000000552	N/A	N/A
PHROG	UHGV-1422285_15	phrog_31631	41.2	0.00000000002	N/A	unknown function
Pfam	UHGV-1422285_16	PF05534	N/A	N/A	HicB family	HicB
structural_annotation	UHGV-1422285_16	PF03869,NF041793	N/A	N/A	N/A	N/A
UniRef90	UHGV-1422285_18	UniRef90_A0A8D9UIS5	130.0	7.1e-34	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1422285_18	658655.HMPREF0988_00895	194.0	0	N/A	N/A
PHROG	UHGV-1422285_19	phrog_236	88.9	5.2e-26	nucleotide kinase	other
UniRef90	UHGV-1422285_19	UniRef90_A0A0F7LAX5	61.2	0.000000000951	Bbp48	N/A
eggNOG-mapper	UHGV-1422285_19	1033743.CAES01000020_gene3148	85.9	7.16e-20	N/A	N/A
Pfam	UHGV-1422285_19	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1422285_21	PF20556	N/A	N/A	N/A	N/A
UniRef90	UHGV-1422285_26	UniRef90_A0A8D9PG29	51.2	0.000000837	Acetyl-coA carboxylase zinc finger domain protein	N/A
structural_annotation	UHGV-1422285_28	PF04466	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_29	phrog_38	138.9	3.59994e-41	terminase large subunit	head and packaging
UniRef90	UHGV-1422285_29	UniRef90_A0A352SH30	1155.0	0	Terminase_6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1422285_29	397290.C810_01390	669.0	0	chromosome segregation	N/A
Pfam	UHGV-1422285_29	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-1422285_29	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1422285_29	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_30	phrog_36	62.0	1.1e-17	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1422285_30	397290.C810_01391	182.0	0	N/A	N/A
structural_annotation	UHGV-1422285_30	PF02996	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1422285_31	PF10122,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_32	phrog_64	176.0	0	portal protein	head and packaging
UniRef90	UHGV-1422285_32	UniRef90_UPI001D0761B7	931.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1422285_32	1298920.KI911353_gene2663	468.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1422285_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1422285_32	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1422285_33	UniRef90_R6C0B6	194.0	0	Phage capsid scaffolding protein	N/A
PHROG	UHGV-1422285_34	phrog_909	81.6	7.5e-24	major head protein	head and packaging
UniRef90	UHGV-1422285_34	UniRef90_R7BGI8	197.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1422285_34	1347368.HG964404_gene4994	60.1	0.000000000455	N/A	N/A
PHROG	UHGV-1422285_35	phrog_29	161.1	0	major head protein	head and packaging
UniRef90	UHGV-1422285_35	UniRef90_A0A173UF26	679.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-1422285_35	756499.Desde_1083	165.0	5.60519e-45	Phage major capsid protein E	N/A
Pfam	UHGV-1422285_35	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1422285_35	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1422285_36	UniRef90_A0A416G2T8	59.7	0.00000000054	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-1422285_36	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1422285_37	397290.C810_01402	61.2	0.000000000163	N/A	N/A
eggNOG-mapper	UHGV-1422285_38	1232452.BAIB02000007_gene1606	51.2	0.00000106	N/A	N/A
PHROG	UHGV-1422285_39	phrog_1129	74.7	8.2e-22	holin	lysis
UniRef90	UHGV-1422285_39	UniRef90_A0A8D9UII9	136.0	4.79999e-40	Holin	N/A
eggNOG-mapper	UHGV-1422285_39	411461.DORFOR_00721	103.0	9.71e-28	N/A	N/A
Pfam	UHGV-1422285_39	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1422285_39	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1422285_40	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1422285_41	UniRef90_UPI001BBD4500	130.0	3.61e-35	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1422285_41	397290.C810_01411	189.0	0	N/A	N/A
structural_annotation	UHGV-1422285_41	PF17395,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1422285_42	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1422285_43	476272.RUMHYD_01968	184.0	0	N/A	N/A
structural_annotation	UHGV-1422285_43	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
KOfam	UHGV-1422285_46	K07273	164.3	0	acm; lysozyme	N/A
PHROG	UHGV-1422285_46	phrog_291	131.7	7e-39	endolysin	lysis
UniRef90	UHGV-1422285_46	UniRef90_UPI001D05F2B6	541.0	0	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-1422285_46	1235800.C819_00458	213.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1422285_46	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1422285_46	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1422285_46	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1422285_46	PF01183,PF01471,MF_02227,NF007360,COG3757,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_47	phrog_28918	146.5	1.59748e-43	N/A	unknown function
UniRef90	UHGV-1422285_47	UniRef90_A0A318EME6	328.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1422285_47	1298920.KI911353_gene2649	319.0	0	tape measure	N/A
COG	UHGV-1422285_47	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1422285_47	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_48	phrog_1194	50.4	0.000000000000034	N/A	unknown function
Pfam	UHGV-1422285_48	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1422285_48	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_49	phrog_18190	575.7	0	N/A	unknown function
UniRef90	UHGV-1422285_49	UniRef90_UPI001D0767E1	935.0	0	gp58-like family protein	N/A
eggNOG-mapper	UHGV-1422285_49	1235790.C805_00089	368.0	0	N/A	N/A
structural_annotation	UHGV-1422285_49	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_51	phrog_17196	104.2	1.1e-30	kinase	other
eggNOG-mapper	UHGV-1422285_51	1235790.C805_00090	138.0	2.68e-34	N/A	N/A
structural_annotation	UHGV-1422285_51	PF13619	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_53	phrog_4	41.1	0.000000000032	transcriptional repressor	transcription regulation
UniRef90	UHGV-1422285_53	UniRef90_UPI001D074CCD	519.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1422285_53	411463.EUBVEN_01507	66.2	0.000000000481	N/A	N/A
Pfam	UHGV-1422285_53	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1422285_53	PF13443,PF00717,MF_00015,NF041951,TIGR02228,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_57	phrog_8	49.7	0.000000000000081	transcriptional regulator	transcription regulation
UniRef90	UHGV-1422285_57	UniRef90_UPI001D081DA8	155.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1422285_57	665950.HMPREF1025_02562	84.0	2.9e-19	TRANSCRIPTIONal	N/A
Pfam	UHGV-1422285_57	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1422285_57	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1422285_57	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1422285_58	UniRef90_A0A3E2U419	87.0	2.18e-21	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1422285_58	762051.LKI_09500	63.2	0.00000000000374	Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators	N/A
Pfam	UHGV-1422285_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1422285_58	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1422285_58	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1422285_60	K07741	130.7	2.5e-38	antB; anti-repressor protein	N/A
PHROG	UHGV-1422285_60	phrog_130	248.6	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1422285_60	UniRef90_R6V613	290.0	0	Phage antirepressor protein	N/A
eggNOG-mapper	UHGV-1422285_60	1122146.AUHP01000010_gene1023	271.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1422285_60	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1422285_60	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1422285_60	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1422285_60	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_62	phrog_19890	82.2	6.2e-24	N/A	unknown function
UniRef90	UHGV-1422285_62	UniRef90_A0A352SFF8	303.0	0	SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1422285_62	1410650.JHWL01000003_gene2854	150.0	6.16571e-44	lytic transglycosylase activity	N/A
Pfam	UHGV-1422285_62	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1422285_62	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1422285_62	PF01464,MF_01381,NF011856,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_63	phrog_22292	60.4	2.2e-17	N/A	unknown function
UniRef90	UHGV-1422285_66	UniRef90_UPI001D091C1C	203.0	0	sporulation initiation factor Spo0A C-terminal domain-containing protein	N/A
Pfam	UHGV-1422285_66	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
structural_annotation	UHGV-1422285_66	PF08769,TIGR02875	N/A	N/A	N/A	N/A
KOfam	UHGV-1422285_67	K19171	59.9	1.7e-17	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1422285_67	phrog_77	151.7	4.2039e-45	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1422285_67	UniRef90_A0A412RQV0	460.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1422285_67	397290.C810_01461	439.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1422285_67	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1422285_67	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_68	phrog_2164	93.3	1e-27	N/A	unknown function
eggNOG-mapper	UHGV-1422285_68	1260356.D920_00267	61.2	0.00000000171	N/A	N/A
structural_annotation	UHGV-1422285_69	PF02237,MF_00257,NF037951,COG4013	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1422285_70	PF18129,PF09953,PF04319,PF08962,MF_00369,NF002745,COG2139	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_71	phrog_561	178.6	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1422285_71	UniRef90_UPI001F3F277E	187.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-1422285_71	537013.CLOSTMETH_01715	199.0	0	N/A	N/A
structural_annotation	UHGV-1422285_71	NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1422285_73	K06167	46.5	0.00000000000028	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1422285_73	phrog_392	175.6	0	metal-dependent hydrolase	other
UniRef90	UHGV-1422285_73	UniRef90_A0A352SIH6	412.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-1422285_73	1443122.Z958_05735	163.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1422285_73	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
COG	UHGV-1422285_73	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1422285_73	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_74	phrog_6724	85.4	5.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-1422285_74	1463936.JOJI01000043_gene7935	65.1	0.0000000000033	N/A	N/A
PHROG	UHGV-1422285_76	phrog_19106	332.3	0	N/A	unknown function
UniRef90	UHGV-1422285_76	UniRef90_UPI001D086F0C	381.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-1422285_76	658655.HMPREF0988_00875	249.0	0	N/A	N/A
structural_annotation	UHGV-1422285_76	TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_79	phrog_8489	193.6	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1422285_79	UniRef90_A0A352SFU9	214.0	0	DNA replication protein (Fragment)	N/A
eggNOG-mapper	UHGV-1422285_79	1415774.U728_867	152.0	8.82818e-44	DnaD domain protein	N/A
COG	UHGV-1422285_79	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1422285_79	TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-1422285_82	phrog_38832	40.3	0.000000000039	N/A	unknown function
UniRef90	UHGV-1422285_82	UniRef90_A0A415TX35	59.7	0.0000000198	BAH domain-containing protein	N/A
eggNOG-mapper	UHGV-1422285_82	1235790.C805_00035	63.9	0.0000000000436	N/A	N/A
eggNOG-mapper	UHGV-1422285_83	428127.EUBDOL_01238	91.3	6.25e-22	N/A	N/A
PHROG	UHGV-1422285_85	phrog_874	175.5	0	N/A	unknown function
UniRef90	UHGV-1422285_85	UniRef90_A0A6N7W7Q7	210.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1422285_85	411468.CLOSCI_00298	183.0	0	N/A	N/A
structural_annotation	UHGV-1422285_85	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
KOfam	UHGV-1422285_87	K00558	131.9	3.8e-39	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1422285_87	phrog_116	140.1	1.10002e-41	DNA methyltransferase	other
UniRef90	UHGV-1422285_87	UniRef90_A0A1Q6KI63	517.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1422285_87	397290.C810_05213	313.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1422285_87	MTase_II_00058	146.8	2.8026e-43	Type II methyltransferase	RM
Pfam	UHGV-1422285_87	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1422285_87	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1422285_87	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1422285_87	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1422285_89	K00558	44.5	0.0000000000014	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1422285_89	phrog_26324	67.6	7.2e-21	DNA methyltransferase	other
UniRef90	UHGV-1422285_89	UniRef90_A0A412KFA2	502.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1422285_89	1121115.AXVN01000007_gene3542	122.0	1.13e-28	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1422285_89	MTase_II_00147	52.4	0.000000000000011	Type II methyltransferase	RM
Pfam	UHGV-1422285_89	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1422285_89	COG0270	N/A	N/A	DNA-cytosine methylase	N/A