UHGV-1422725 (vOTU-010781)

Viral Genome: UHGV-1422725

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1422725
vOTU ID	vOTU-010781
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0243746
Associated BioSample	SAMN06328494
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	92.14 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9807
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.81
Jumbo phage	No

Genome content
Genome length (bp)	35,761
GC content	45.51%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	54
CDS density	91%
Average CDS length (bps)	603.89
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 92.14)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1422725_1	K06400	295.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1422725_1	phrog_95	315.0	0	integrase	integration and excision
UniRef90	UHGV-1422725_1	UniRef90_A0A174S1P9	903.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-1422725_1	411459.RUMOBE_00967	615.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-1422725_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1422725_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1422725_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1422725_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1422725_1	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_2	phrog_1847	520.2	0	N/A	unknown function
UniRef90	UHGV-1422725_2	UniRef90_UPI00040ED02D	577.0	0	N/A	N/A
eggNOG-mapper	UHGV-1422725_2	1235792.C808_05258	437.0	0	N/A	N/A
Pfam	UHGV-1422725_2	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-1422725_2	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-1422725_2	COG0172	N/A	N/A	Seryl-tRNA synthetase	N/A
structural_annotation	UHGV-1422725_2	PF13250,PF19824,MF_01506	N/A	N/A	N/A	N/A
KOfam	UHGV-1422725_5	K22300	51.8	0.000000000000017	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-1422725_5	UniRef90_A0A3R6SM67	156.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1422725_5	97138.C820_01960	123.0	9.31e-35	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1422725_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1422725_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1422725_5	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_7	phrog_31760	63.5	1.5e-18	N/A	unknown function
PHROG	UHGV-1422725_10	phrog_28292	111.5	2.9e-33	N/A	unknown function
UniRef90	UHGV-1422725_10	UniRef90_A0A8B3BZ84	90.9	1.78e-22	3-hydroxyacyl-CoA dehydrogenase	N/A
eggNOG-mapper	UHGV-1422725_10	500632.CLONEX_01438	82.4	6.73e-20	N/A	N/A
PHROG	UHGV-1422725_14	phrog_3584	177.4	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1422725_14	411459.RUMOBE_00953	319.0	0	N/A	N/A
structural_annotation	UHGV-1422725_14	PF21578,NF041486	N/A	N/A	N/A	N/A
UniRef90	UHGV-1422725_15	UniRef90_A0A373P426	216.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1422725_15	411461.DORFOR_01140	88.2	2.07e-20	RNA-DNA hybrid ribonuclease activity	N/A
Pfam	UHGV-1422725_15	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1422725_15	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1422725_15	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1422725_16	1235792.C808_00065	233.0	0	N/A	N/A
PHROG	UHGV-1422725_17	phrog_8470	335.7	0	N/A	unknown function
UniRef90	UHGV-1422725_17	UniRef90_UPI001D086F83	820.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1422725_17	1235792.C808_03081	902.0	0	PcfJ-like protein	N/A
Pfam	UHGV-1422725_17	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1422725_17	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_18	phrog_15077	111.4	1.5e-32	N/A	unknown function
UniRef90	UHGV-1422725_18	UniRef90_A5ZPN2	165.0	2.12997e-43	N/A	N/A
eggNOG-mapper	UHGV-1422725_18	97139.C824_05986	232.0	0	N/A	N/A
structural_annotation	UHGV-1422725_18	PF11300,NF033725	N/A	N/A	N/A	N/A
UniRef90	UHGV-1422725_19	UniRef90_A0A1C6E2K7	107.0	9.46e-29	LexA repressor	N/A
eggNOG-mapper	UHGV-1422725_19	1118059.CAHC01000010_gene129	49.3	0.00000908	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-1422725_19	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
COG	UHGV-1422725_19	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1422725_19	PF01726,MF_00732,NF041852,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-1422725_20	K03111	129.2	4.8e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1422725_20	phrog_44	134.9	5.30001e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1422725_20	UniRef90_A0A373P5V7	249.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1422725_20	1256908.HMPREF0373_03133	201.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1422725_20	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1422725_20	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1422725_20	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1422725_20	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1422725_20	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_21	phrog_7566	98.2	3.9e-29	N/A	unknown function
eggNOG-mapper	UHGV-1422725_21	411459.RUMOBE_00948	91.3	3.33e-22	N/A	N/A
structural_annotation	UHGV-1422725_22	PF02796,NF040595	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_25	phrog_16351	40.0	0.000000000048	DNA binding protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1422725_25	658655.HMPREF0988_00866	98.2	3.17e-24	N/A	N/A
PHROG	UHGV-1422725_27	phrog_36	71.0	1.7e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1422725_27	UniRef90_A0A373MZQ3	212.0	0	N/A	N/A
eggNOG-mapper	UHGV-1422725_27	1235800.C819_02243	92.4	4.87e-22	N/A	N/A
Pfam	UHGV-1422725_27	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-1422725_27	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1422725_28	PF09855,COG3478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1422725_29	491205.JARQ01000004_gene2524	65.5	0.000000000148	N/A	N/A
Pfam	UHGV-1422725_29	PF20712	N/A	N/A	Cyanobacterial TRADD-N associated 2-Transmembrane domain	CyanoTRADDas_TM
KOfam	UHGV-1422725_30	K07474	119.1	5.6e-35	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1422725_30	phrog_2606	333.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-1422725_30	UniRef90_UPI001592B6B8	362.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1422725_30	478749.BRYFOR_07604	317.0	0	terminase, small subunit	N/A
Pfam	UHGV-1422725_30	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-1422725_30	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1422725_30	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1422725_30	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1422725_31	K06909	85.1	9.7e-25	xtmB; phage terminase large subunit	N/A
UniRef90	UHGV-1422725_31	UniRef90_A0A174B1X3	958.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1422725_31	742740.HMPREF9474_03500	657.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1422725_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1422725_31	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_32	phrog_533	254.6	0	portal protein	head and packaging
UniRef90	UHGV-1422725_32	UniRef90_A0A174B3T3	986.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-1422725_32	394503.Ccel_3049	513.0	0	N/A	N/A
Pfam	UHGV-1422725_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1422725_32	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_33	phrog_25639	122.8	7.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-1422725_33	742740.HMPREF9474_03502	91.3	2.43e-23	N/A	N/A
PHROG	UHGV-1422725_34	phrog_581	262.3	0	minor head protein	head and packaging
UniRef90	UHGV-1422725_34	UniRef90_A0A174B2Q8	1130.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1422725_34	33035.JPJF01000093_gene2255	485.0	0	N/A	N/A
Pfam	UHGV-1422725_34	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1422725_34	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-1422725_34	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_37	phrog_872	163.5	0	N/A	unknown function
UniRef90	UHGV-1422725_37	UniRef90_A0A3R6QU45	238.0	0	N/A	N/A
eggNOG-mapper	UHGV-1422725_37	1123288.SOV_4c02650	151.0	5.60519e-45	N/A	N/A
Pfam	UHGV-1422725_37	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1422725_37	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1422725_37	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_39	phrog_194	167.6	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1422725_39	UniRef90_A0A174B6A1	356.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1422725_39	1294142.CINTURNW_1028	163.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1422725_39	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1422725_39	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_40	phrog_212	284.1	0	major head protein	head and packaging
UniRef90	UHGV-1422725_40	UniRef90_A0A416Q289	561.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1422725_40	1151292.QEW_2433	494.0	0	N/A	N/A
structural_annotation	UHGV-1422725_40	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_41	phrog_15682	59.1	6.6e-17	N/A	unknown function
UniRef90	UHGV-1422725_41	UniRef90_UPI001788BFA4	56.2	0.000000016	Rho termination factor N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1422725_41	1408823.AXUS01000024_gene2717	66.6	0.00000000000018	N/A	N/A
PHROG	UHGV-1422725_42	phrog_8710	137.2	3.80004e-41	N/A	unknown function
eggNOG-mapper	UHGV-1422725_42	1304866.K413DRAFT_0782	146.0	1.10703e-43	N/A	N/A
structural_annotation	UHGV-1422725_42	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_43	phrog_556	52.4	0.0000000000000083	minor head protein	head and packaging
eggNOG-mapper	UHGV-1422725_43	742740.HMPREF9474_03509	168.0	0	N/A	N/A
PHROG	UHGV-1422725_44	phrog_2595	70.8	1.9e-20	head-tail connector protein	connector
UniRef90	UHGV-1422725_44	UniRef90_UPI001C00BA9C	173.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1422725_44	1123263.AUKY01000051_gene1075	95.5	1.58e-23	N/A	N/A
Pfam	UHGV-1422725_44	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1422725_44	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_45	phrog_820	108.8	3e-32	major tail protein	tail
eggNOG-mapper	UHGV-1422725_45	33035.JPJF01000093_gene2246	194.0	0	N/A	N/A
structural_annotation	UHGV-1422725_45	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_46	phrog_8300	88.6	5.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-1422725_46	1282664.H354_06701	72.0	0.00000000000000466	N/A	N/A
structural_annotation	UHGV-1422725_46	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_47	phrog_8355	99.7	1e-29	N/A	unknown function
UniRef90	UHGV-1422725_47	UniRef90_UPI001C10E2B7	119.0	2.32e-33	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1422725_47	483218.BACPEC_01147	85.9	4.31e-21	Bacteriophage Gp15 protein	N/A
PHROG	UHGV-1422725_48	phrog_1535	282.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1422725_48	UniRef90_A0A1C5PIN9	910.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1422725_48	33035.JPJF01000093_gene2243	503.0	0	phage tail tape measure protein	N/A
COG	UHGV-1422725_48	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1422725_48	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_49	phrog_1194	65.7	6.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1422725_49	33035.JPJF01000093_gene2242	138.0	9.05996e-41	N/A	N/A
structural_annotation	UHGV-1422725_49	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_50	phrog_6616	530.8	0	tail protein	tail
UniRef90	UHGV-1422725_50	UniRef90_A0A0J1FXD9	350.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1422725_50	1121866.AUGK01000003_gene1439	254.0	0	Phage minor structural protein	N/A
COG	UHGV-1422725_50	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1422725_50	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_51	phrog_11037	165.1	0	N/A	unknown function
UniRef90	UHGV-1422725_51	UniRef90_A0A174B682	692.0	0	NlpC/P60 family	N/A
eggNOG-mapper	UHGV-1422725_51	33035.JPJF01000093_gene2240	273.0	0	NlpC/P60 family	N/A
Pfam	UHGV-1422725_51	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-1422725_51	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-1422725_51	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1422725_51	PF18013,PF05382,NF033742,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1422725_52	phrog_24267	77.3	1.2e-22	N/A	unknown function
UniRef90	UHGV-1422725_52	UniRef90_A0A174B5G0	390.0	0	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-1422725_52	1123302.KB904167_gene530	89.0	5.86e-18	the current gene model (or a revised gene model) may contain a frame shift	N/A
COG	UHGV-1422725_52	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1422725_53	phrog_19695	77.6	2.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-1422725_53	411462.DORLON_00772	95.9	2.01e-24	N/A	N/A
structural_annotation	UHGV-1422725_53	PF19714	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1422725_54	1232452.BAIB02000007_gene1610	83.2	3.5e-16	N/A	N/A
structural_annotation	UHGV-1422725_54	PF10651,COG3470	N/A	N/A	N/A	N/A