UHGV-1422816 (vOTU-012992)

Viral Genome: UHGV-1422816

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1422816
vOTU ID	vOTU-012992
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0228609
Associated BioSample	SAMEA3541566
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.76 (High-quality)
Trimmed provirus	No
CheckV viral markers	32
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9794
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	62.98
Jumbo phage	No

Genome content
Genome length (bp)	33,036
GC content	38.66%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	49
CDS density	91%
Average CDS length (bps)	611.14
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1422816_1	phrog_1529	93.0	4.3e-27	N/A	unknown function
UniRef90	UHGV-1422816_1	UniRef90_A0A1X0WPY5	114.0	2e-32	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1422816_1	888049.HMPREF8578_0245	114.0	4.77e-33	N/A	N/A
structural_annotation	UHGV-1422816_1	PF01381,NF040507,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1422816_2	K01447	58.5	1.2e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1422816_2	phrog_1110	362.2	0	endolysin	lysis
UniRef90	UHGV-1422816_2	UniRef90_F9P1M5	449.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1422816_2	768726.HMPREF9178_1047	449.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1422816_2	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1422816_2	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
Pfam	UHGV-1422816_2	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
COG	UHGV-1422816_2	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1422816_2	PF19127,PF01510,TIGR04035,COG5263	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_3	phrog_297	64.6	1.6e-18	holin	lysis
UniRef90	UHGV-1422816_3	UniRef90_A0A3R9N1B9	147.0	9.80909e-45	Bacteriophage holin	N/A
eggNOG-mapper	UHGV-1422816_3	1282664.H354_07765	135.0	8.88003e-41	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1422816_3	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1422816_3	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1422816_3	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1422816_3	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_4	phrog_32123	261.8	0	N/A	unknown function
UniRef90	UHGV-1422816_4	UniRef90_A0A150NS28	383.0	0	N/A	N/A
eggNOG-mapper	UHGV-1422816_4	997830.HMPREF1124_0614	243.0	0	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1422816_4	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
UniRef90	UHGV-1422816_5	UniRef90_A0A150NVR4	168.0	0	N/A	N/A
PHROG	UHGV-1422816_6	phrog_6487	189.5	0	N/A	unknown function
UniRef90	UHGV-1422816_6	UniRef90_A0A0U0KNR2	273.0	0	N/A	N/A
eggNOG-mapper	UHGV-1422816_6	365659.smi_0474	182.0	0	N/A	N/A
structural_annotation	UHGV-1422816_6	PF10651,NF041178,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_7	phrog_4257	127.0	8.7e-38	N/A	unknown function
UniRef90	UHGV-1422816_7	UniRef90_F9PZ52	108.0	2.39e-27	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1422816_7	997830.HMPREF1124_0612	110.0	7.06e-29	N/A	N/A
PHROG	UHGV-1422816_8	phrog_1554	237.6	0	N/A	unknown function
UniRef90	UHGV-1422816_8	UniRef90_A0A139Q9H9	286.0	0	N/A	N/A
eggNOG-mapper	UHGV-1422816_8	1035189.HMPREF9954_1920	232.0	0	N/A	N/A
structural_annotation	UHGV-1422816_8	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_9	phrog_12683	93.9	1e-27	N/A	unknown function
PHROG	UHGV-1422816_10	phrog_1210	621.6	0	PblB-type receptor binding	other
UniRef90	UHGV-1422816_10	UniRef90_UPI0018980067	1368.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1422816_10	1297534.CAUJ01000005_gene170	1351.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1422816_10	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1422816_10	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1422816_10	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1422816_10	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1422816_10	PF14594,PF00629,TIGR01665,TIGR04362,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_11	phrog_33	59.5	1.3e-17	distal tail protein Dit	tail
UniRef90	UHGV-1422816_11	UniRef90_UPI00195B2D0A	333.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1422816_11	1297534.CAUJ01000005_gene171	473.0	0	N/A	N/A
structural_annotation	UHGV-1422816_11	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_12	phrog_15002	272.6	0	N/A	unknown function
UniRef90	UHGV-1422816_12	UniRef90_B1I7B2	1220.0	0	Prophage LambdaSa04, tail tape measure protein, family	N/A
eggNOG-mapper	UHGV-1422816_12	1297534.CAUJ01000005_gene172	1179.0	0	Tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1422816_12	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1422816_12	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1422816_12	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1422816_12	PF10145,MF_04138,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_13	phrog_3343	331.5	0	N/A	unknown function
PHROG	UHGV-1422816_14	phrog_2634	349.1	0	major tail protein	tail
UniRef90	UHGV-1422816_14	UniRef90_A0A0A0YQP9	444.0	0	Major tail protein	N/A
Pfam	UHGV-1422816_14	PF06488	N/A	N/A	Phage tail tube protein	L_lac_phage_MSP
structural_annotation	UHGV-1422816_14	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_15	phrog_5	47.9	0.00000000000032	tail completion or Neck1 protein	connector
UniRef90	UHGV-1422816_15	UniRef90_A0A0T8CJ85	231.0	0	Bacteriophage pi2 protein 37	N/A
eggNOG-mapper	UHGV-1422816_15	272623.L58927	66.6	0.00000000000147	N/A	N/A
Pfam	UHGV-1422816_15	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
PHROG	UHGV-1422816_16	phrog_3334	254.0	0	N/A	unknown function
PHROG	UHGV-1422816_17	phrog_3332	207.3	0	head-tail adaptor	connector
UniRef90	UHGV-1422816_17	UniRef90_A0A0A0YRS5	169.0	0	Head-tail adapter protein	N/A
Pfam	UHGV-1422816_17	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
PHROG	UHGV-1422816_18	phrog_3305	218.9	0	virion structural protein	head and packaging
UniRef90	UHGV-1422816_18	UniRef90_A0A3B8DLV7	170.0	0	Glycerate kinase	N/A
PHROG	UHGV-1422816_19	phrog_10	100.1	2.8e-29	major head protein	head and packaging
UniRef90	UHGV-1422816_19	UniRef90_A0A0A0YQP6	759.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1422816_19	1566990.A0A0A0YQP6_9CAUD	759.0	0	peptidase activity	N/A
Pfam	UHGV-1422816_19	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1422816_19	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
KOfam	UHGV-1422816_20	K06904	144.8	7.80523e-43	N/A	N/A
PHROG	UHGV-1422816_20	phrog_80	156.0	0	head maturation protease	head and packaging
UniRef90	UHGV-1422816_20	UniRef90_A0A0A0YV29	360.0	0	Prohead maturation protease	N/A
eggNOG-mapper	UHGV-1422816_20	1566990.A0A0A0YV29_9CAUD	360.0	0	peptidase activity	N/A
Pfam	UHGV-1422816_20	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1422816_20	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
structural_annotation	UHGV-1422816_20	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_21	phrog_12	133.2	1.4e-39	portal protein	head and packaging
UniRef90	UHGV-1422816_21	UniRef90_A0A0A0YSD7	747.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1422816_21	1566990.A0A0A0YSD7_9CAUD	747.0	0	Phage portal protein	N/A
Pfam	UHGV-1422816_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-1422816_21	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_22	phrog_9	316.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1422816_22	UniRef90_A0A7T2ZXC7	1063.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-1422816_22	1566990.A0A0A0YRS2_9CAUD	1145.0	0	Phage Terminase	N/A
Pfam	UHGV-1422816_22	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1422816_22	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1422816_22	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_23	phrog_3567	326.4	0	N/A	unknown function
UniRef90	UHGV-1422816_23	UniRef90_A0A7X1BZ96	89.7	9.78e-20	MerR family transcriptional regulator	N/A
KOfam	UHGV-1422816_24	K04763	102.1	6.4e-30	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1422816_24	phrog_216	188.2	0	integrase	integration and excision
UniRef90	UHGV-1422816_24	UniRef90_A0A0A0YRV7	362.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-1422816_24	1297534.CAUJ01000005_gene184	363.0	0	Integrase	N/A
Pfam	UHGV-1422816_24	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1422816_24	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1422816_24	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_25	phrog_36	75.3	8.9e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1422816_25	UniRef90_A0A116QW24	250.0	0	Bacteriophage transcriptional activator	N/A
eggNOG-mapper	UHGV-1422816_25	1069533.Sinf_0781	52.4	0.00000173	Transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1422816_25	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1422816_26	K22300	42.6	0.000000000011	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1422816_26	phrog_8	60.8	3.1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1422816_26	UniRef90_A0A0A0YQT1	236.0	0	Cro repressor	N/A
Pfam	UHGV-1422816_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1422816_26	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1422816_26	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_27	phrog_7626	143.9	2.29813e-43	N/A	unknown function
PHROG	UHGV-1422816_28	phrog_884	111.9	2.4e-33	N/A	unknown function
UniRef90	UHGV-1422816_28	UniRef90_A0A2A2TVW8	155.0	0	N/A	N/A
eggNOG-mapper	UHGV-1422816_28	365659.smi_0433	154.0	0	N/A	N/A
Pfam	UHGV-1422816_28	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-1422816_28	PF07116,COG3585	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_29	phrog_4667	106.4	7.8e-32	N/A	unknown function
UniRef90	UHGV-1422816_29	UniRef90_A0A060QNR9	94.4	1.85e-24	N/A	N/A
PHROG	UHGV-1422816_30	phrog_3606	86.3	2.1e-25	N/A	unknown function
PHROG	UHGV-1422816_31	phrog_4019	174.4	0	N/A	unknown function
UniRef90	UHGV-1422816_31	UniRef90_F9PY75	197.0	0	Conserved domain protein	N/A
PHROG	UHGV-1422816_32	phrog_13581	166.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1422816_32	365659.smi_0431	186.0	0	N/A	N/A
PHROG	UHGV-1422816_33	phrog_121	123.8	2.2e-37	N/A	unknown function
UniRef90	UHGV-1422816_33	UniRef90_UPI00066D5CFD	292.0	0	N/A	N/A
eggNOG-mapper	UHGV-1422816_33	365659.smi_0429	182.0	0	N/A	N/A
Pfam	UHGV-1422816_33	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1422816_33	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_35	phrog_7484	723.2	0	N/A	unknown function
UniRef90	UHGV-1422816_35	UniRef90_Q7Y4K1	798.0	0	Gp23	N/A
eggNOG-mapper	UHGV-1422816_35	997830.HMPREF1124_0583	847.0	0	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-1422816_35	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1422816_35	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_36	phrog_7445	187.6	0	N/A	unknown function
UniRef90	UHGV-1422816_36	UniRef90_Q7Y4K2	286.0	0	Gp22	N/A
eggNOG-mapper	UHGV-1422816_36	157924.Q7Y4K2_9CAUD	286.0	0	PcfK-like protein	N/A
Pfam	UHGV-1422816_36	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-1422816_36	PF14058	N/A	N/A	N/A	N/A
KOfam	UHGV-1422816_37	K02315	163.1	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1422816_37	phrog_50	165.9	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1422816_37	UniRef90_A0A7G1IS63	481.0	0	DNA replication protein	N/A
eggNOG-mapper	UHGV-1422816_37	1566990.A0A0A0YSG2_9CAUD	486.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-1422816_37	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
structural_annotation	UHGV-1422816_37	PF01695,MF_00377,NF005931,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_38	phrog_2108	90.1	1.1e-26	N/A	unknown function
UniRef90	UHGV-1422816_38	UniRef90_Q7Y4K4	97.8	6.52e-26	Gp20	N/A
KOfam	UHGV-1422816_39	K02086	40.7	0.000000000024	dnaD; DNA replication protein	N/A
PHROG	UHGV-1422816_39	phrog_5968	143.1	1.3999e-42	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1422816_39	UniRef90_A0A0A0YX41	503.0	0	DnaD	N/A
eggNOG-mapper	UHGV-1422816_39	888049.HMPREF8578_0678	318.0	0	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-1422816_39	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
Pfam	UHGV-1422816_39	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-1422816_39	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-1422816_39	COG3611	N/A	N/A	Replication initiation and membrane attachment protein DnaB	N/A
structural_annotation	UHGV-1422816_39	PF09681,TIGR01714,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_40	phrog_7483	138.4	1.10002e-41	N/A	unknown function
UniRef90	UHGV-1422816_40	UniRef90_A0A0X8UVS5	126.0	7.92e-37	N/A	N/A
PHROG	UHGV-1422816_41	phrog_668	76.2	3.4e-22	HTH DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1422816_41	UniRef90_A0A098ANK2	178.0	0	DNA-binding protein	N/A
structural_annotation	UHGV-1422816_41	PF12728,NF033499,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-1422816_42	K07741	45.2	0.0000000000028	antB; anti-repressor protein	N/A
PHROG	UHGV-1422816_42	phrog_463	287.7	0	anti-repressor	transcription regulation
UniRef90	UHGV-1422816_42	UniRef90_E9FJV2	460.0	0	BRO family, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-1422816_42	563038.HMPREF0851_00558	460.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1422816_42	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1422816_42	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1422816_42	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1422816_42	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_43	phrog_9949	123.2	5.9e-37	N/A	unknown function
AcrCatalog	UHGV-1422816_43	cluster_10982	110.0	3.46e-35	NA	N/A
PHROG	UHGV-1422816_44	phrog_25340	145.1	8.26766e-44	N/A	unknown function
PHROG	UHGV-1422816_45	phrog_24094	170.9	0	N/A	unknown function
UniRef90	UHGV-1422816_45	UniRef90_Q7Y4L2	125.0	4.91e-36	Gp12	N/A
UniRef90	UHGV-1422816_46	UniRef90_A0A0A0YQR3	143.0	2.01787e-43	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1422816_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1422816_46	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1422816_46	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_47	phrog_8	80.6	2.4e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1422816_47	UniRef90_A0A0A0YV45	249.0	0	CI repressor	N/A
eggNOG-mapper	UHGV-1422816_47	936580.HMPREF1516_0749	135.0	1.17e-39	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1422816_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1422816_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1422816_47	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1422816_48	phrog_1516	250.5	0	N/A	unknown function
UniRef90	UHGV-1422816_48	UniRef90_A0A0A0YSF3	495.0	0	Peptidase_M78 domain-containing protein	N/A
Pfam	UHGV-1422816_48	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1422816_48	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1422816_48	PF06114,COG2856	N/A	N/A	N/A	N/A