UHGV-1424088 (vOTU-132986)

Viral Genome: UHGV-1424088

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1424088
vOTU ID	vOTU-132986
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0160431
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	59.76 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9803
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	38.15
Jumbo phage	No

Genome content
Genome length (bp)	21,875
GC content	38.97%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	26
CDS density	92%
Average CDS length (bps)	773.19
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1424088_1	K06909	359.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1424088_1	phrog_3717	166.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1424088_1	UniRef90_A0A6N9L4W9	794.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1424088_1	1504823.CCMM01000008_gene1048	734.0	0	DNA packaging	N/A
Pfam	UHGV-1424088_1	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1424088_1	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1424088_1	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1424088_1	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1424088_1	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_2	phrog_64	388.6	0	portal protein	head and packaging
UniRef90	UHGV-1424088_2	UniRef90_A0A6N9L3D6	886.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1424088_2	445974.CLORAM_02935	478.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1424088_2	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1424088_2	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1424088_2	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_3	phrog_2841	331.3	0	minor head protein	head and packaging
UniRef90	UHGV-1424088_3	UniRef90_A0A6N9L4X5	686.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1424088_3	742733.HMPREF9469_01825	278.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-1424088_3	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1424088_3	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1424088_3	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1424088_3	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_5	phrog_3675	114.6	3.5e-34	N/A	unknown function
UniRef90	UHGV-1424088_5	UniRef90_A0A0E4H649	119.0	8.87e-33	YjcQ protein	N/A
eggNOG-mapper	UHGV-1424088_5	1120978.KB894082_gene1061	142.0	2.1594e-42	YjcQ protein	N/A
Pfam	UHGV-1424088_5	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1424088_5	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_6	phrog_30609	66.3	4.8e-19	N/A	unknown function
structural_annotation	UHGV-1424088_6	PF21485	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_7	phrog_172	157.0	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1424088_7	UniRef90_A0A6N9L4V5	290.0	0	N/A	N/A
eggNOG-mapper	UHGV-1424088_7	445974.CLORAM_02931	128.0	1.53e-34	N/A	N/A
Pfam	UHGV-1424088_7	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1424088_7	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_8	phrog_422	299.6	0	major head protein	head and packaging
UniRef90	UHGV-1424088_8	UniRef90_A0A2H4JCM6	305.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-1424088_8	1211844.CBLM010000016_gene1491	306.0	0	N/A	N/A
structural_annotation	UHGV-1424088_8	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_9	phrog_2724	62.7	6.1e-18	N/A	unknown function
UniRef90	UHGV-1424088_9	UniRef90_A0A6N9L4P9	158.0	0	Rho_N domain-containing protein	N/A
Pfam	UHGV-1424088_9	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-1424088_9	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-1424088_9	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_10	phrog_132	42.0	0.000000000014	head-tail adaptor	connector
UniRef90	UHGV-1424088_10	UniRef90_UPI001C101B39	53.1	0.000000737	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1424088_10	1235800.C819_00483	56.2	0.0000000114	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1424088_10	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1424088_10	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_11	phrog_2168	90.5	1.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-1424088_11	1280689.AUJC01000003_gene969	78.2	2.52e-17	N/A	N/A
structural_annotation	UHGV-1424088_11	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_12	phrog_5	67.9	1.9e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-1424088_12	UniRef90_A0A6N9L3B6	320.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1424088_12	742733.HMPREF9469_01819	144.0	9.84973e-42	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1424088_12	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1424088_12	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1424088_12	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_13	phrog_78	54.4	0.0000000000000024	tail terminator	connector
eggNOG-mapper	UHGV-1424088_13	1504823.CCMM01000008_gene1036	140.0	1.74994e-41	N/A	N/A
structural_annotation	UHGV-1424088_13	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_14	phrog_158	71.9	1.1e-20	major tail protein	tail
UniRef90	UHGV-1424088_14	UniRef90_A0A6N9L2K6	258.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1424088_14	445974.CLORAM_02924	174.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1424088_14	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1424088_14	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_15	phrog_183	57.3	2.8e-16	tail chaperone protein	tail
UniRef90	UHGV-1424088_15	UniRef90_UPI0011C9B36A	217.0	0	N/A	N/A
eggNOG-mapper	UHGV-1424088_15	445974.CLORAM_02923	115.0	2.67e-31	N/A	N/A
Pfam	UHGV-1424088_15	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1424088_15	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_16	phrog_1535	316.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1424088_16	UniRef90_A0A6N9L4U2	1409.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1424088_16	650150.ERH_0621	339.0	0	tape measure	N/A
Pfam	UHGV-1424088_16	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1424088_16	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1424088_16	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1424088_16	PF09325	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_17	phrog_1194	80.8	1.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-1424088_17	1504823.CCMM01000008_gene1031	187.0	0	N/A	N/A
Pfam	UHGV-1424088_17	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1424088_17	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_18	phrog_15074	55.4	3e-16	N/A	unknown function
eggNOG-mapper	UHGV-1424088_18	445974.CLORAM_02919	491.0	0	cellulase activity	N/A
COG	UHGV-1424088_18	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1424088_18	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_19	phrog_30133	110.0	2e-32	virion structural protein	head and packaging
UniRef90	UHGV-1424088_19	UniRef90_A0A087BZT1	296.0	0	N/A	N/A
eggNOG-mapper	UHGV-1424088_19	1504823.CCMM01000008_gene1029	315.0	0	N/A	N/A
structural_annotation	UHGV-1424088_19	PF14874,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_20	phrog_18110	42.3	0.0000000000068	N/A	unknown function
eggNOG-mapper	UHGV-1424088_20	411465.PEPMIC_00746	78.6	0.0000000000000936	Prophage endopeptidase tail	N/A
COG	UHGV-1424088_20	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1424088_21	phrog_372	232.8	0	tail protein	tail
UniRef90	UHGV-1424088_21	UniRef90_UPI0006C32325	1118.0	0	N/A	N/A
eggNOG-mapper	UHGV-1424088_21	1211844.CBLM010000016_gene1479	211.0	0	N/A	N/A
Pfam	UHGV-1424088_21	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1424088_21	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_22	phrog_199	60.7	1.7e-17	holin	lysis
UniRef90	UHGV-1424088_22	UniRef90_E2NU60	293.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1424088_22	742723.HMPREF9477_00889	195.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1424088_22	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1424088_22	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1424088_22	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1424088_22	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1424088_23	phrog_774	58.1	2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1424088_23	397290.C810_05225	77.4	1.63e-17	N/A	N/A
KOfam	UHGV-1424088_24	K01447	107.6	1.5e-31	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1424088_24	phrog_1493	122.0	1.6e-36	endolysin	lysis
UniRef90	UHGV-1424088_24	UniRef90_A0A1Q6MQM1	283.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1424088_24	1235802.C823_05611	186.0	0	Ami_2	N/A
Pfam	UHGV-1424088_24	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1424088_24	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1424088_24	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1424088_24	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1424088_25	633147.Olsu_1237	52.8	0.0000000146	N/A	N/A
KOfam	UHGV-1424088_26	K14059	44.1	0.0000000000036	int; integrase	N/A
PHROG	UHGV-1424088_26	phrog_1	53.3	0.0000000000000057	integrase	integration and excision
UniRef90	UHGV-1424088_26	UniRef90_U4SZR8	90.9	1.25e-20	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1424088_26	1504823.CCMM01000008_gene1083	175.0	0	DNA integration	N/A
COG	UHGV-1424088_26	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A