UHGV-1425577 (vOTU-111846)

Viral Genome: UHGV-1425577

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1425577
vOTU ID	vOTU-111846
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0168955
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	55.02 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9762
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	36.06
Jumbo phage	No

Genome content
Genome length (bp)	23,049
GC content	43.50%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	35
CDS density	91%
Average CDS length (bps)	598.89
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.02)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1425577_1	phrog_1067	107.1	1.9e-31	minor head protein	head and packaging
UniRef90	UHGV-1425577_1	UniRef90_A0A376L507	87.4	2.14e-18	Phage minor structural protein N-terminal domain protein	N/A
eggNOG-mapper	UHGV-1425577_1	1246.JMEA01000006_gene52	131.0	5.21e-33	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family	N/A
Pfam	UHGV-1425577_1	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
NCBIFam	UHGV-1425577_1	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1425577_1	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
PHROG	UHGV-1425577_2	phrog_33	71.2	2.3e-20	distal tail protein Dit	tail
UniRef90	UHGV-1425577_2	UniRef90_A0A0R1T8W7	158.0	8.40779e-45	N/A	N/A
eggNOG-mapper	UHGV-1425577_2	908337.HMPREF9257_0528	95.1	7.06e-21	phage tail	N/A
COG	UHGV-1425577_2	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1425577_2	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1425577_3	K20478	45.4	0.00000000000011	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-1425577_3	phrog_1293	1067.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1425577_3	UniRef90_A0A7H9EIX9	694.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1425577_3	1423816.BACQ01000026_gene933	555.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-1425577_3	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1425577_3	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1425577_3	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1425577_3	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1425577_4	phrog_187	61.6	1e-17	head-tail adaptor	connector
PHROG	UHGV-1425577_5	phrog_88	122.3	3.5e-36	major tail protein	tail
UniRef90	UHGV-1425577_5	UniRef90_V7HVG2	228.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-1425577_5	1122147.AUEH01000027_gene2740	162.0	0	Phage tail tube protein	N/A
Pfam	UHGV-1425577_5	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-1425577_5	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1425577_5	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1425577_6	phrog_78	59.4	6.6e-17	tail terminator	connector
UniRef90	UHGV-1425577_6	UniRef90_A0A0E2BLI0	68.9	0.00000000000146	Putative phage protein	N/A
eggNOG-mapper	UHGV-1425577_6	1423816.BACQ01000026_gene938	70.1	0.000000000000087	N/A	N/A
structural_annotation	UHGV-1425577_6	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-1425577_7	UniRef90_V7HUI7	116.0	8.8e-31	Gp9 protein	N/A
eggNOG-mapper	UHGV-1425577_7	1423816.BACQ01000026_gene939	108.0	1.71e-28	N/A	N/A
structural_annotation	UHGV-1425577_7	PF04883,TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-1425577_8	UniRef90_V7HX72	131.0	3.13e-37	Gp8 protein	N/A
eggNOG-mapper	UHGV-1425577_8	1336234.JAGN01000004_gene523	101.0	4.5e-26	N/A	N/A
structural_annotation	UHGV-1425577_8	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1425577_9	phrog_749	74.5	1e-21	N/A	unknown function
UniRef90	UHGV-1425577_9	UniRef90_A0A2G4RJB6	112.0	2.43e-30	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1425577_9	1035189.HMPREF9954_1935	52.4	0.000000141	N/A	N/A
Pfam	UHGV-1425577_9	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
PHROG	UHGV-1425577_10	phrog_10	139.3	3.20001e-41	major head protein	head and packaging
UniRef90	UHGV-1425577_10	UniRef90_V7HVG4	501.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-1425577_10	1423816.BACQ01000026_gene942	368.0	0	Phage capsid family	N/A
Pfam	UHGV-1425577_10	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1425577_10	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1425577_10	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1425577_10	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1425577_11	K01358	116.2	4e-34	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1425577_11	phrog_94	188.7	0	head maturation protease	head and packaging
UniRef90	UHGV-1425577_11	UniRef90_UPI001866C65A	197.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1425577_11	1033738.CAEP01000167_gene3589	161.0	0	Serine dehydrogenase proteinase	N/A
Pfam	UHGV-1425577_11	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1425577_11	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1425577_11	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1425577_12	phrog_12	141.6	4.1002e-42	portal protein	head and packaging
UniRef90	UHGV-1425577_12	UniRef90_A0A2G4RJA7	405.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1425577_12	1497679.EP56_02230	289.0	0	Phage portal protein	N/A
Pfam	UHGV-1425577_12	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1425577_12	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1425577_12	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1425577_12	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1425577_13	phrog_9	303.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1425577_13	UniRef90_A0A2G4RJB0	824.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1425577_13	935836.JAEL01000005_gene2705	656.0	0	Terminase	N/A
Pfam	UHGV-1425577_13	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1425577_13	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1425577_13	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1425577_13	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1425577_14	phrog_2343	58.7	7e-17	terminase small subunit	head and packaging
UniRef90	UHGV-1425577_14	UniRef90_UPI0010388BB8	86.7	4.59e-20	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1425577_14	1122147.AUEH01000027_gene2749	56.2	0.00000000727	N/A	N/A
structural_annotation	UHGV-1425577_14	PF05119,TIGR01558	N/A	N/A	N/A	N/A
KOfam	UHGV-1425577_15	K07451	50.5	0.00000000000004	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1425577_15	phrog_144	81.5	1.2e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1425577_15	UniRef90_UPI001C0EDF45	103.0	7.74e-27	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1425577_15	1334046.AYTB01000013_gene438	93.2	1.56e-23	HNH endonuclease	N/A
Pfam	UHGV-1425577_15	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1425577_15	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1425577_15	PF05766,NF008448	N/A	N/A	N/A	N/A
UniRef90	UHGV-1425577_21	UniRef90_A0A7X2P872	107.0	9.06e-28	Ribbon-helix-helix protein, CopG family	N/A
eggNOG-mapper	UHGV-1425577_21	1095750.HMPREF9970_2261	104.0	2.55e-27	N/A	N/A
PHROG	UHGV-1425577_22	phrog_6160	121.4	7.2e-36	N/A	unknown function
eggNOG-mapper	UHGV-1425577_22	397291.C804_04947	115.0	1.06e-26	N/A	N/A
KOfam	UHGV-1425577_25	K01520	134.2	9.79999e-40	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1425577_25	phrog_135	123.4	1.4e-36	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1425577_25	UniRef90_A0A6A2VG41	169.0	0	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-1425577_25	1282887.AUJG01000016_gene1113	150.0	5.04467e-44	N/A	N/A
Pfam	UHGV-1425577_25	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1425577_25	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1425577_25	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1425577_25	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
UniRef90	UHGV-1425577_26	UniRef90_A0A6A8HTR6	295.0	0	Restriction endonuclease subunit M	N/A
eggNOG-mapper	UHGV-1425577_26	936574.HMPREF1508_1307	277.0	0	restriction endonuclease	N/A
PADLOC	UHGV-1425577_26	MTase_II_00176	177.8	0	Type II methyltransferase	RM
COG	UHGV-1425577_26	COG1002	N/A	N/A	Type II restriction/modification system, endonuclease and methylase domains	N/A
structural_annotation	UHGV-1425577_27	COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-1425577_28	phrog_190	95.1	7e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1425577_28	UniRef90_A0A848CEG1	148.0	7.21669e-43	N/A	N/A
eggNOG-mapper	UHGV-1425577_28	1069534.LRC_07200	177.0	0	N/A	N/A
Pfam	UHGV-1425577_28	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1425577_28	PF06356,NF033179	N/A	N/A	N/A	N/A
UniRef90	UHGV-1425577_29	UniRef90_A0A0G8G8R8	174.0	0	Putative conjugation-related ATPase	N/A
PHROG	UHGV-1425577_30	phrog_236	74.3	3.1e-21	nucleotide kinase	other
UniRef90	UHGV-1425577_30	UniRef90_UPI000CBEDF51	58.2	0.000000246	N/A	N/A
eggNOG-mapper	UHGV-1425577_30	1302286.BAOT01000008_gene594	65.1	0.0000000000833	N/A	N/A
Pfam	UHGV-1425577_30	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-1425577_34	phrog_1709	58.0	1.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-1425577_34	1423724.BAMM01000034_gene2120	73.9	0.00000000000000107	N/A	N/A