UHGV-1426765 (vOTU-030159)

Viral Genome: UHGV-1426765

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1426765
vOTU ID	vOTU-030159
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0153551
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	56.36 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9803
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	37.23
Jumbo phage	No

Genome content
Genome length (bp)	20,964
GC content	50.52%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	27
CDS density	94%
Average CDS length (bps)	729.89
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1426765_2	UniRef90_A0A351F9G2	72.0	0.00000000000000233	RHH_1 domain-containing protein	N/A
structural_annotation	UHGV-1426765_2	PF01402,NF040976,COG4710	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426765_3	COG1859	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_5	phrog_263	78.2	6e-23	holin	lysis
UniRef90	UHGV-1426765_5	UniRef90_A0A3D5TN47	184.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-1426765_5	315750.BPUM_3085	60.8	0.000000000051	SPP1 phage holin	N/A
Pfam	UHGV-1426765_5	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-1426765_5	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-1426765_5	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_6	phrog_9428	122.7	9.1e-38	N/A	unknown function
UniRef90	UHGV-1426765_6	UniRef90_A0A3D5TMQ6	214.0	0	Serine/threonine protein kinase	N/A
eggNOG-mapper	UHGV-1426765_6	1519439.JPJG01000059_gene1948	115.0	1.23e-31	N/A	N/A
KOfam	UHGV-1426765_7	K01448	111.5	9.1e-33	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1426765_7	phrog_435	136.3	3e-40	endolysin	lysis
UniRef90	UHGV-1426765_7	UniRef90_A0A3D5TMB6	595.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1426765_7	1203606.HMPREF1526_00962	97.4	5.36e-21	Ami_3	N/A
Pfam	UHGV-1426765_7	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1426765_7	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1426765_7	PF01520,PF15591,MF_00562,TIGR02883,NF033202,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_8	phrog_27545	101.5	8.2e-30	N/A	unknown function
UniRef90	UHGV-1426765_8	UniRef90_R6ELD6	96.7	6.15e-23	Glycosyl hydrolase family 18 family protein	N/A
eggNOG-mapper	UHGV-1426765_8	411471.SUBVAR_06976	94.7	7.24e-23	N/A	N/A
structural_annotation	UHGV-1426765_10	PF02973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426765_11	PF10651,NF009453	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_13	phrog_1067	390.1	0	minor head protein	head and packaging
UniRef90	UHGV-1426765_13	UniRef90_A0A1C6H6B4	362.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1426765_13	1160721.RBI_I01574	348.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1426765_13	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1426765_13	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1426765_13	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1426765_13	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_14	phrog_33	70.2	4.8e-20	distal tail protein Dit	tail
UniRef90	UHGV-1426765_14	UniRef90_D6XZX5	113.0	4.81e-27	Phage tail component	N/A
eggNOG-mapper	UHGV-1426765_14	1444306.JFZC01000034_gene2623	136.0	7.47e-37	tail component	N/A
COG	UHGV-1426765_14	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1426765_14	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_15	phrog_58	100.4	2e-33	tail length tape measure protein	tail
UniRef90	UHGV-1426765_15	UniRef90_A0A316QKN8	262.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-1426765_15	394503.Ccel_2825	261.0	0	tape measure	N/A
COG	UHGV-1426765_15	COG5185	N/A	N/A	Chromosome segregation protein NDC80, interacts with SMC proteins	N/A
structural_annotation	UHGV-1426765_15	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_16	phrog_2115	42.1	0.000000000015	tail protein	tail
structural_annotation	UHGV-1426765_16	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_17	phrog_88	78.2	1.1e-22	major tail protein	tail
UniRef90	UHGV-1426765_17	UniRef90_UPI001D07B441	129.0	2.13e-34	major tail protein	N/A
eggNOG-mapper	UHGV-1426765_17	1235792.C808_03059	106.0	8.36e-25	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1426765_17	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1426765_17	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1426765_17	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_18	phrog_78	50.1	0.000000000000051	tail terminator	connector
eggNOG-mapper	UHGV-1426765_18	1238184.CM001792_gene2512	66.6	0.000000000001	N/A	N/A
structural_annotation	UHGV-1426765_18	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_19	phrog_5	41.6	0.000000000025	tail completion or Neck1 protein	connector
UniRef90	UHGV-1426765_19	UniRef90_A0A174CK72	97.8	2.61e-23	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1426765_19	1235792.C808_03060	82.8	2.45e-18	N/A	N/A
Pfam	UHGV-1426765_19	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1426765_19	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_20	phrog_1951	46.4	0.00000000000065	head-tail adaptor	connector
eggNOG-mapper	UHGV-1426765_20	457396.CSBG_01051	51.2	0.000000631	head-tail adaptor	N/A
Pfam	UHGV-1426765_20	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
COG	UHGV-1426765_20	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
UniRef90	UHGV-1426765_21	UniRef90_UPI0006544DF9	51.2	0.0000019	head-tail connector protein	N/A
Pfam	UHGV-1426765_21	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-1426765_21	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1426765_21	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_22	phrog_10	160.8	0	major head protein	head and packaging
UniRef90	UHGV-1426765_22	UniRef90_UPI000C7BECD8	316.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1426765_22	1414720.CBYM010000002_gene572	231.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1426765_22	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1426765_22	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1426765_22	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1426765_22	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_23	phrog_16951	253.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1426765_23	246199.CUS_7602	191.0	0	N/A	N/A
structural_annotation	UHGV-1426765_23	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_24	phrog_12	270.9	0	portal protein	head and packaging
UniRef90	UHGV-1426765_24	UniRef90_UPI001C11FE4E	493.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1426765_24	634956.Geoth_0787	440.0	0	Phage portal protein	N/A
Pfam	UHGV-1426765_24	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1426765_24	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1426765_24	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1426765_24	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_25	phrog_9	321.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1426765_25	UniRef90_UPI000C7CE66A	717.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1426765_25	742738.HMPREF9460_04067	655.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1426765_25	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1426765_25	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1426765_25	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1426765_25	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1426765_26	phrog_83	84.3	1.6e-24	terminase small subunit	head and packaging
UniRef90	UHGV-1426765_26	UniRef90_UPI00067FA7FA	137.0	1.9e-38	phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-1426765_26	1567013.A0A0A7S0C4_9CAUD	136.0	7.14e-39	Phage terminase, small subunit	N/A
Pfam	UHGV-1426765_26	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1426765_26	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-1426765_27	K07451	50.1	0.000000000000049	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1426765_27	phrog_144	104.2	1e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1426765_27	UniRef90_U5CG67	90.9	8.2e-21	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1426765_27	1508644.SFBmNL_01550	80.1	1.27e-17	HNH endonuclease	N/A
Pfam	UHGV-1426765_27	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1426765_27	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1426765_27	PF05766	N/A	N/A	N/A	N/A