UHGV-1427383 (vOTU-021950)

Viral Genome: UHGV-1427383

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1427383
vOTU ID	vOTU-021950
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0151932
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	65.02 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9809
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	25.01
Jumbo phage	No

Genome content
Genome length (bp)	20,747
GC content	61.35%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	27
CDS density	95%
Average CDS length (bps)	733.67
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.02)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1427383_1	phrog_3584	99.9	3e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1427383_1	742738.HMPREF9460_00867	117.0	1.28e-29	N/A	N/A
UniRef90	UHGV-1427383_2	UniRef90_UPI001A9BD6FA	52.8	0.000000108	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-1427383_2	658086.HMPREF0994_02536	50.4	0.000000123	Cysteine-rich KTR	N/A
Pfam	UHGV-1427383_2	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
KOfam	UHGV-1427383_3	K07451	47.8	0.00000000000023	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1427383_3	phrog_119	75.7	5.7e-22	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1427383_3	UniRef90_A0A3D1VCB5	214.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-1427383_3	1145276.T479_20000	111.0	7.92e-31	HNH nucleases	N/A
Pfam	UHGV-1427383_3	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1427383_3	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1427383_4	phrog_361	73.7	2.6e-21	terminase small subunit	head and packaging
UniRef90	UHGV-1427383_4	UniRef90_R6ETV2	78.2	3.34e-16	Phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-1427383_4	596315.HMPREF0634_0388	77.0	1.76e-16	Phage terminase, small subunit	N/A
Pfam	UHGV-1427383_4	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1427383_4	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1427383_5	phrog_9	289.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1427383_5	UniRef90_A0A3D1VAR5	1157.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1427383_5	1226322.HMPREF1545_00113	793.0	0	Phage Terminase	N/A
Pfam	UHGV-1427383_5	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1427383_5	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1427383_5	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1427383_5	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1427383_6	phrog_12	161.5	0	portal protein	head and packaging
UniRef90	UHGV-1427383_6	UniRef90_A0A3D1VH02	776.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1427383_6	1121423.JONT01000042_gene1421	427.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1427383_6	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1427383_6	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1427383_6	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1427383_6	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1427383_7	K06904	146.5	2.29813e-43	N/A	N/A
PHROG	UHGV-1427383_7	phrog_80	165.1	0	head maturation protease	head and packaging
UniRef90	UHGV-1427383_7	UniRef90_A0A3D1VA27	392.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1427383_7	1235798.C817_04584	222.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1427383_7	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1427383_7	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1427383_7	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1427383_7	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1427383_8	phrog_10	174.4	0	major head protein	head and packaging
UniRef90	UHGV-1427383_8	UniRef90_A0A3D1VAZ0	697.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1427383_8	642492.Clole_0744	391.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1427383_8	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1427383_8	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1427383_8	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1427383_8	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1427383_9	phrog_2550	70.2	1.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-1427383_9	588581.Cpap_1271	63.9	0.00000000000404	N/A	N/A
structural_annotation	UHGV-1427383_9	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1427383_10	phrog_1951	69.9	2.7e-20	head-tail adaptor	connector
UniRef90	UHGV-1427383_10	UniRef90_A0A3D1VD59	184.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1427383_10	913865.DOT_5630	60.5	0.000000000114	N/A	N/A
structural_annotation	UHGV-1427383_10	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1427383_11	UniRef90_UPI00156FE9DA	103.0	4e-26	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1427383_11	1035189.HMPREF9954_1091	74.3	0.00000000000000234	Bacteriophage HK97-gp10, putative tail-component	N/A
structural_annotation	UHGV-1427383_11	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1427383_12	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1427383_13	phrog_2175	77.9	1.4e-22	protein with Ig domain	other
eggNOG-mapper	UHGV-1427383_13	86416.Clopa_0346	196.0	0	N/A	N/A
Pfam	UHGV-1427383_13	PF00061	N/A	N/A	Lipocalin / cytosolic fatty-acid binding protein family	Lipocalin
structural_annotation	UHGV-1427383_13	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1427383_14	411468.CLOSCI_00542	49.7	0.00000276	N/A	N/A
structural_annotation	UHGV-1427383_14	PF17388	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1427383_15	1219626.HMPREF1639_07460	62.4	0.00000000000691	N/A	N/A
PHROG	UHGV-1427383_16	phrog_9959	144.6	5.10073e-43	tail length tape measure protein	tail
UniRef90	UHGV-1427383_16	UniRef90_A0A3S4X6P5	183.0	8.40779e-45	Phage-related protein	N/A
eggNOG-mapper	UHGV-1427383_16	411470.RUMGNA_02228	190.0	0	tape measure	N/A
Pfam	UHGV-1427383_16	PF20155	N/A	N/A	Tape measure protein	TMP_3
COG	UHGV-1427383_16	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1427383_16	COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1427383_17	411490.ANACAC_00709	59.3	0.00000026	phage tail	N/A
COG	UHGV-1427383_17	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1427383_17	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1427383_18	phrog_3558	196.9	0	tail protein	tail
UniRef90	UHGV-1427383_18	UniRef90_A0A3D1VAY1	470.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1427383_18	1111121.HMPREF1247_1242	131.0	4e-30	Prophage endopeptidase tail	N/A
Pfam	UHGV-1427383_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1427383_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1427383_18	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1427383_18	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1427383_19	411473.RUMCAL_00420	72.0	0.000000000479	nuclear chromosome segregation	N/A
Pfam	UHGV-1427383_19	PF03406	N/A	N/A	Phage tail fibre repeat	Phage_fiber_2
COG	UHGV-1427383_19	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1427383_20	PF00629,NF033675	N/A	N/A	N/A	N/A
KOfam	UHGV-1427383_21	K01447	64.8	1.8e-18	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1427383_21	phrog_1794	144.4	1.10002e-42	amidase	lysis
UniRef90	UHGV-1427383_21	UniRef90_R5AZE6	308.0	0	N-acetylmuramoyl-L-alanine amidase family 2	N/A
eggNOG-mapper	UHGV-1427383_21	1235800.C819_03946	206.0	0	Ami_2	N/A
Pfam	UHGV-1427383_21	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1427383_21	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1427383_21	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1427383_22	phrog_1863	59.2	1.6e-17	N/A	unknown function
UniRef90	UHGV-1427383_22	UniRef90_UPI001F223E8B	68.2	0.000000000000329	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-1427383_22	1226322.HMPREF1545_04027	65.9	0.000000000000438	N/A	N/A
PHROG	UHGV-1427383_23	phrog_1129	62.8	4.2e-18	holin	lysis
UniRef90	UHGV-1427383_23	UniRef90_A0A8J6J3M3	100.0	8.6e-26	Phage holin family protein	N/A
eggNOG-mapper	UHGV-1427383_23	742740.HMPREF9474_03522	95.1	1.41e-24	N/A	N/A
Pfam	UHGV-1427383_23	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1427383_23	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-1427383_24	UniRef90_A0A4R1QMH6	87.0	3.93e-21	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1427383_24	445972.ANACOL_00210	101.0	1.03e-27	N/A	N/A
Pfam	UHGV-1427383_24	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
structural_annotation	UHGV-1427383_24	PF13560,TIGR02612,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1427383_27	K06400	276.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1427383_27	phrog_95	286.6	0	integrase	integration and excision
UniRef90	UHGV-1427383_27	UniRef90_A0A417HSQ2	373.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1427383_27	1356854.N007_18555	189.0	0	Recombinase	N/A
Pfam	UHGV-1427383_27	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1427383_27	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1427383_27	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1427383_27	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A