UHGV-1427579 (vOTU-104841)

Viral Genome: UHGV-1427579

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1427579
vOTU ID	vOTU-104841
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0152089
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.67 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	25
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9817
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	28.31
Jumbo phage	No

Genome content
Genome length (bp)	20,770
GC content	41.39%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	29
CDS density	95%
Average CDS length (bps)	683.69
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.67)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1427579_1	phrog_10091	45.3	0.0000000000016	holin	lysis
UniRef90	UHGV-1427579_1	UniRef90_Q708K1	98.6	6.23e-26	Holin	N/A
eggNOG-mapper	UHGV-1427579_1	428127.EUBDOL_01206	67.0	0.0000000000000401	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1427579_1	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
COG	UHGV-1427579_1	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_2	phrog_32123	284.8	0	N/A	unknown function
UniRef90	UHGV-1427579_2	UniRef90_A0A150NS28	387.0	0	N/A	N/A
eggNOG-mapper	UHGV-1427579_2	997830.HMPREF1124_0614	256.0	0	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1427579_2	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
UniRef90	UHGV-1427579_3	UniRef90_A0A150NVR4	172.0	0	N/A	N/A
PHROG	UHGV-1427579_4	phrog_6487	228.2	0	N/A	unknown function
UniRef90	UHGV-1427579_4	UniRef90_A0A139Q9I2	285.0	0	N/A	N/A
eggNOG-mapper	UHGV-1427579_4	365659.smi_0474	228.0	0	N/A	N/A
structural_annotation	UHGV-1427579_4	PF10651,NF041178,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_5	phrog_1296	112.4	1.3e-33	holin	lysis
UniRef90	UHGV-1427579_5	UniRef90_A0A1S9ZST0	140.0	1.19993e-41	Phage membrane protein	N/A
PHROG	UHGV-1427579_6	phrog_1554	230.1	0	N/A	unknown function
UniRef90	UHGV-1427579_6	UniRef90_A0A139Q9H9	169.0	0	N/A	N/A
eggNOG-mapper	UHGV-1427579_6	1095737.HMPREF1110_1749	226.0	0	N/A	N/A
structural_annotation	UHGV-1427579_6	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_7	phrog_12683	107.3	7.2e-32	N/A	unknown function
PHROG	UHGV-1427579_8	phrog_7841	878.3	0	N/A	unknown function
UniRef90	UHGV-1427579_8	UniRef90_A0A0U0KNR3	738.0	0	Phage hyaluronidase	N/A
eggNOG-mapper	UHGV-1427579_8	1461246.X2KUF9_9VIRU	330.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1427579_8	PF07902	N/A	N/A	gp58-like protein	Gp58
Pfam	UHGV-1427579_8	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1427579_8	PF13884	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_9	phrog_34743	44.9	0.0000000000015	N/A	unknown function
structural_annotation	UHGV-1427579_9	PF21231,COG0806	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_10	phrog_27035	264.2	0	N/A	unknown function
UniRef90	UHGV-1427579_10	UniRef90_A0A0T8EK90	455.0	0	Hyaluronoglucosaminidase	N/A
eggNOG-mapper	UHGV-1427579_10	482234.SCAZ3_03785	82.4	0.0000000000000021	translation initiation factor activity	N/A
Pfam	UHGV-1427579_10	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
COG	UHGV-1427579_10	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1427579_10	PF18454	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_11	phrog_2270	538.1	0	N/A	unknown function
UniRef90	UHGV-1427579_11	UniRef90_A0A0U0KNU3	1145.0	0	Bacteriophage PblB	N/A
eggNOG-mapper	UHGV-1427579_11	1566990.A0A0A0YV37_9CAUD	745.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1427579_11	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1427579_11	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1427579_11	PF14594,PF13620,TIGR01665,TIGR04183,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_12	phrog_33	49.8	0.000000000000064	distal tail protein Dit	tail
UniRef90	UHGV-1427579_12	UniRef90_UPI001EFF5C66	330.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1427579_12	1123314.AUIO01000016_gene850	335.0	0	N/A	N/A
structural_annotation	UHGV-1427579_12	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1427579_13	K10421	45.8	0.00000000000034	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-1427579_13	phrog_58	314.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1427579_13	UniRef90_A0A081QD07	1096.0	0	Chromosome partition protein Smc	N/A
eggNOG-mapper	UHGV-1427579_13	888049.HMPREF8578_0706	865.0	0	Phage tail tape measure protein	N/A
COG	UHGV-1427579_13	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-1427579_13	PF10145,MF_04138,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_14	phrog_709	126.7	9.3e-38	N/A	unknown function
UniRef90	UHGV-1427579_14	UniRef90_A0A0E4CSV4	172.0	0	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-1427579_14	1035184.HMPREF1042_1216	176.0	0	N/A	N/A
structural_annotation	UHGV-1427579_14	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_15	phrog_88	158.0	0	major tail protein	tail
UniRef90	UHGV-1427579_15	UniRef90_A0A7G1ITF4	390.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1427579_15	1005705.HMPREF9967_1048	304.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1427579_15	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1427579_15	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-1427579_16	UniRef90_T0U477	121.0	1.41e-33	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1427579_16	644007.C5J968_9CAUD	131.0	2.61e-38	aminopeptidase activity	N/A
structural_annotation	UHGV-1427579_16	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_17	phrog_5	42.9	0.000000000013	tail completion or Neck1 protein	connector
UniRef90	UHGV-1427579_17	UniRef90_UPI00195EB731	145.0	1.22053e-42	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1427579_17	1123314.AUIO01000016_gene844	149.0	5.60519e-45	N/A	N/A
Pfam	UHGV-1427579_17	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1427579_17	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_18	phrog_1951	112.7	1.4e-33	head-tail adaptor	connector
UniRef90	UHGV-1427579_18	UniRef90_UPI001956060B	158.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1427579_18	1005705.HMPREF9967_1045	142.0	5.91348e-43	head-tail adaptor	N/A
NCBIFam	UHGV-1427579_18	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1427579_18	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1427579_18	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_19	phrog_2550	125.0	1.4e-37	N/A	unknown function
UniRef90	UHGV-1427579_19	UniRef90_A0A0T8BHT1	134.0	2.35e-39	N/A	N/A
eggNOG-mapper	UHGV-1427579_19	644007.C5J965_9CAUD	125.0	1.8e-36	Phage gp6-like head-tail connector protein	N/A
structural_annotation	UHGV-1427579_19	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_20	phrog_3673	73.0	2.5e-21	Arc-like repressor	transcription regulation
UniRef90	UHGV-1427579_20	UniRef90_A0A098ANL2	79.7	7.05e-18	N/A	N/A
eggNOG-mapper	UHGV-1427579_20	491915.Aflv_0665	49.7	0.000000417	N/A	N/A
PHROG	UHGV-1427579_21	phrog_10	179.4	0	major head protein	head and packaging
UniRef90	UHGV-1427579_21	UniRef90_A0A1X0X1F5	639.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1427579_21	644007.C5J963_9CAUD	612.0	0	peptidase activity	N/A
Pfam	UHGV-1427579_21	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1427579_21	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1427579_21	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1427579_22	K06904	133.9	1.6e-39	N/A	N/A
PHROG	UHGV-1427579_22	phrog_80	169.2	0	head maturation protease	head and packaging
UniRef90	UHGV-1427579_22	UniRef90_A0A098ANM2	363.0	0	Bacteriophage maturation protease	N/A
eggNOG-mapper	UHGV-1427579_22	1005705.HMPREF9967_1041	340.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1427579_22	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1427579_22	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1427579_22	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1427579_22	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_23	phrog_12	197.0	0	portal protein	head and packaging
UniRef90	UHGV-1427579_23	UniRef90_A0A7G1IQG3	778.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1427579_23	1123314.AUIO01000016_gene838	627.0	0	Phage portal protein	N/A
Pfam	UHGV-1427579_23	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1427579_23	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1427579_23	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1427579_23	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_24	phrog_9	339.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1427579_24	UniRef90_A0A7G1IQ86	1143.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1427579_24	644007.C5J959_9CAUD	1101.0	0	Phage Terminase	N/A
Pfam	UHGV-1427579_24	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1427579_24	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1427579_24	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_25	phrog_361	153.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-1427579_25	UniRef90_A0A822W0L3	225.0	0	Bacteriophage terminase protein, small subunit	N/A
eggNOG-mapper	UHGV-1427579_25	1005705.HMPREF9967_1038	244.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1427579_25	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1427579_25	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1427579_25	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_26	phrog_119	67.8	1.6e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1427579_26	UniRef90_W1US92	214.0	0	Prophage LambdaBa02, HNH endonuclease family protein	N/A
eggNOG-mapper	UHGV-1427579_26	888049.HMPREF8578_0692	189.0	0	endonuclease activity	N/A
COG	UHGV-1427579_26	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-1427579_28	K04763	103.6	2.5e-30	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1427579_28	phrog_216	187.3	0	integrase	integration and excision
UniRef90	UHGV-1427579_28	UniRef90_A0A4D6B299	358.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-1427579_28	644007.C5J955_9CAUD	360.0	0	Phage integrase family	N/A
Pfam	UHGV-1427579_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-1427579_28	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1427579_29	phrog_36	78.1	1.3e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1427579_29	UniRef90_E6KKC4	247.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-1427579_29	1008453.HMPREF9957_0709	85.5	1.57e-19	N/A	N/A
NCBIFam	UHGV-1427579_29	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1427579_29	PF05263,TIGR01636	N/A	N/A	N/A	N/A