UHGV-1427600 (vOTU-034871)

Viral Genome: UHGV-1427600

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1427600
vOTU ID	vOTU-034871
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0159236
Associated BioSample	SAMEA2738091
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	62.39 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	22
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9803
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	56.5
Jumbo phage	No

Genome content
Genome length (bp)	21,715
GC content	40.30%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	26
CDS density	97%
Average CDS length (bps)	811.50
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 62.39)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1427600_1	phrog_4455	81.1	9.3e-24	N/A	unknown function
UniRef90	UHGV-1427600_1	UniRef90_A0A4J2CRE4	80.1	3.56e-18	N/A	N/A
PHROG	UHGV-1427600_2	phrog_36	112.6	3.2e-33	transcriptional regulator	transcription regulation
UniRef90	UHGV-1427600_2	UniRef90_UPI00094E52C3	269.0	0	N/A	N/A
eggNOG-mapper	UHGV-1427600_2	1321372.AQQB01000060_gene55	204.0	0	N/A	N/A
Pfam	UHGV-1427600_2	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1427600_2	PF07374,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1427600_3	K07474	42.6	0.000000000017	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1427600_3	phrog_1595	196.7	0	terminase small subunit	head and packaging
UniRef90	UHGV-1427600_3	UniRef90_UPI001C47DEB7	298.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1427600_3	764291.STRUR_2109	271.0	0	N/A	N/A
Pfam	UHGV-1427600_3	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
KOfam	UHGV-1427600_4	K06909	291.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1427600_4	phrog_3717	168.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1427600_4	UniRef90_G5KEP9	831.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1427600_4	1035189.HMPREF9954_0302	833.0	0	Terminase-like family	N/A
Pfam	UHGV-1427600_4	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1427600_4	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1427600_4	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1427600_4	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1427600_4	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_5	phrog_533	619.6	0	portal protein	head and packaging
UniRef90	UHGV-1427600_5	UniRef90_UPI00094E2DA3	911.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1427600_5	764291.STRUR_2107	835.0	0	portal protein	N/A
Pfam	UHGV-1427600_5	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1427600_5	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1427600_5	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1427600_6	K11044	52.6	0.0000000000000075	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
PHROG	UHGV-1427600_6	phrog_581	410.4	0	minor head protein	head and packaging
UniRef90	UHGV-1427600_6	UniRef90_A0A4D6B3C1	926.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1427600_6	1035189.HMPREF9954_0304	678.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1427600_6	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-1427600_6	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
COG	UHGV-1427600_6	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1427600_6	PF06152,PF03496,NF040688	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_8	phrog_194	131.1	8.3e-39	head scaffolding protein	head and packaging
UniRef90	UHGV-1427600_8	UniRef90_UPI00094F12CC	319.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1427600_8	646413.C5IUJ4_9CAUD	192.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1427600_8	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1427600_8	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_9	phrog_422	219.8	0	major head protein	head and packaging
UniRef90	UHGV-1427600_9	UniRef90_A0A1X1KL37	437.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1427600_9	1035189.HMPREF9954_0307	431.0	0	N/A	N/A
structural_annotation	UHGV-1427600_9	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_10	phrog_10018	71.8	5.7e-21	N/A	unknown function
PHROG	UHGV-1427600_11	phrog_2910	60.5	2.8e-17	N/A	unknown function
UniRef90	UHGV-1427600_11	UniRef90_F9PZ37	90.9	9.35e-23	Conserved domain protein	N/A
structural_annotation	UHGV-1427600_11	PF20873	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_12	phrog_541	99.9	1.5e-29	head-tail adaptor	connector
UniRef90	UHGV-1427600_12	UniRef90_A0A501VK26	194.0	0	N/A	N/A
eggNOG-mapper	UHGV-1427600_12	764291.STRUR_2099	199.0	0	N/A	N/A
PHROG	UHGV-1427600_13	phrog_793	124.2	4.9e-37	head-tail adaptor	connector
UniRef90	UHGV-1427600_13	UniRef90_UPI00094E7DA0	236.0	0	putative minor capsid protein	N/A
eggNOG-mapper	UHGV-1427600_13	537874.B3GW07_9CAUD	117.0	1.29e-32	Minor capsid protein	N/A
Pfam	UHGV-1427600_13	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-1427600_13	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_14	phrog_556	97.4	9.8e-29	minor head protein	head and packaging
UniRef90	UHGV-1427600_14	UniRef90_UPI00094F08CC	239.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1427600_14	646413.C5IUJ8_9CAUD	167.0	0	Minor capsid protein	N/A
Pfam	UHGV-1427600_14	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1427600_14	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_15	phrog_913	154.2	0	minor head protein	head and packaging
UniRef90	UHGV-1427600_15	UniRef90_UPI00094E56EF	266.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1427600_15	764299.STRIC_2534	167.0	0	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-1427600_15	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1427600_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_16	phrog_820	170.5	0	major tail protein	tail
UniRef90	UHGV-1427600_16	UniRef90_UPI00094E9B67	305.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1427600_16	764291.STRUR_2095	263.0	0	N/A	N/A
structural_annotation	UHGV-1427600_16	PF08813,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_17	phrog_1061	85.5	6.8e-25	N/A	unknown function
UniRef90	UHGV-1427600_17	UniRef90_A0A139RN56	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-1427600_17	1035189.HMPREF9954_0315	199.0	0	N/A	N/A
structural_annotation	UHGV-1427600_17	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_18	phrog_706	211.0	0	N/A	unknown function
UniRef90	UHGV-1427600_18	UniRef90_UPI00094E88FB	387.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1427600_18	1035189.HMPREF9954_0316	354.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1427600_18	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1427600_18	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_19	phrog_1204	638.0	0	tail protein	tail
UniRef90	UHGV-1427600_19	UniRef90_UPI00094EDD5E	998.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-1427600_19	1035189.HMPREF9954_0317	516.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1427600_19	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1427600_19	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1427600_19	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1427600_20	phrog_33	90.7	2.7e-26	distal tail protein Dit	tail
UniRef90	UHGV-1427600_20	UniRef90_UPI00094F352E	479.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1427600_20	173707.Q938K2_9CAUD	344.0	0	Phage tail protein	N/A
NCBIFam	UHGV-1427600_20	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-1427600_20	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_21	phrog_2270	401.4	0	N/A	unknown function
UniRef90	UHGV-1427600_21	UniRef90_UPI0012BD39E8	593.0	0	carbohydrate binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1427600_21	764299.STRIC_2540	625.0	0	N/A	N/A
Pfam	UHGV-1427600_21	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1427600_21	PF07902	N/A	N/A	gp58-like protein	Gp58
NCBIFam	UHGV-1427600_21	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1427600_21	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1427600_21	PF14594,PF07902,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_23	phrog_1554	214.2	0	N/A	unknown function
UniRef90	UHGV-1427600_23	UniRef90_A0A359YI08	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-1427600_23	1005705.HMPREF9967_1055	290.0	0	N/A	N/A
structural_annotation	UHGV-1427600_23	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_24	phrog_4257	134.7	4.2e-40	N/A	unknown function
UniRef90	UHGV-1427600_24	UniRef90_A0A139QKW6	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-1427600_24	997830.HMPREF1124_0612	194.0	0	N/A	N/A
PHROG	UHGV-1427600_25	phrog_33625	68.8	4.6e-20	holin	lysis
UniRef90	UHGV-1427600_25	UniRef90_UPI00094E4C5E	172.0	0	phage holin	N/A
eggNOG-mapper	UHGV-1427600_25	644007.C5J977_9CAUD	113.0	9e-32	Bacteriophage holin	N/A
Pfam	UHGV-1427600_25	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1427600_25	TIGR01598.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-1427600_25	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1427600_26	phrog_32123	299.3	0	N/A	unknown function
UniRef90	UHGV-1427600_26	UniRef90_UPI00094EEBC2	868.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1427600_26	997830.HMPREF1124_0614	482.0	0	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1427600_26	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A