UHGV-1427837 (vOTU-104064)

Viral Genome: UHGV-1427837

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1427837
vOTU ID	vOTU-104064
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0160010
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.38 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9811
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.35
Jumbo phage	No

Genome content
Genome length (bp)	21,820
GC content	38.34%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	28
CDS density	94%
Average CDS length (bps)	729.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.38)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1427837_1	1123263.AUKY01000050_gene665	85.9	3.88e-19	typically periplasmic, contain C-terminal PDZ domain	N/A
COG	UHGV-1427837_1	COG0265	N/A	N/A	Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain	N/A
PHROG	UHGV-1427837_2	phrog_443	60.5	4.7e-17	holin	lysis
UniRef90	UHGV-1427837_2	UniRef90_UPI0004232E58	134.0	1.63e-39	holin	N/A
eggNOG-mapper	UHGV-1427837_2	1123263.AUKY01000046_gene485	134.0	2.73e-40	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1427837_2	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1427837_2	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-1427837_4	K01447	62.3	9.6e-18	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1427837_4	phrog_7698	170.4	0	endolysin	lysis
UniRef90	UHGV-1427837_4	UniRef90_UPI000411C1B0	587.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1427837_4	1123263.AUKY01000023_gene1215	587.0	0	Cpl-7 lysozyme C-terminal domain protein	N/A
Pfam	UHGV-1427837_4	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1427837_4	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1427837_4	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1427837_4	PF01510,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
Pfam	UHGV-1427837_5	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-1427837_6	phrog_372	85.2	5.6e-25	tail protein	tail
eggNOG-mapper	UHGV-1427837_6	445971.ANASTE_00089	62.8	0.000000289	N/A	N/A
COG	UHGV-1427837_6	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1427837_7	phrog_1067	330.4	0	minor head protein	head and packaging
UniRef90	UHGV-1427837_7	UniRef90_A0A412PAL3	777.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1427837_7	1123263.AUKY01000068_gene489	775.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1427837_7	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1427837_7	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1427837_7	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1427837_8	phrog_33	60.3	5.1e-17	distal tail protein Dit	tail
UniRef90	UHGV-1427837_8	UniRef90_A0A1C5W6B6	143.0	8.45e-39	Phage-related protein	N/A
eggNOG-mapper	UHGV-1427837_8	1123263.AUKY01000068_gene490	324.0	0	tail component	N/A
COG	UHGV-1427837_8	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1427837_8	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1427837_9	phrog_991	220.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1427837_9	UniRef90_E7MNY6	767.0	0	Phage tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-1427837_9	706433.HMPREF9430_01257	767.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1427837_9	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1427837_9	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1427837_9	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1427837_9	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1427837_10	phrog_1526	84.6	8.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-1427837_10	665950.HMPREF1025_02524	63.5	0.00000000000415	N/A	N/A
PHROG	UHGV-1427837_11	phrog_117	161.0	0	major tail protein	tail
UniRef90	UHGV-1427837_11	UniRef90_A0A890GW67	318.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1427837_11	706433.HMPREF9430_01260	352.0	0	domain, Protein	N/A
COG	UHGV-1427837_11	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1427837_11	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1427837_12	UniRef90_A0A0E8ZUI3	89.7	5.82e-21	Gp45	N/A
eggNOG-mapper	UHGV-1427837_12	706433.HMPREF9430_01261	202.0	0	N/A	N/A
structural_annotation	UHGV-1427837_12	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1427837_13	phrog_387	51.1	0.000000000000019	neck protein	connector
eggNOG-mapper	UHGV-1427837_13	748224.HMPREF9436_00694	58.5	0.000000000508	N/A	N/A
PHROG	UHGV-1427837_14	phrog_501	79.3	4.3e-23	head closure Hc1	connector
UniRef90	UHGV-1427837_14	UniRef90_A0A139NBR3	122.0	5.23e-34	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1427837_14	706433.HMPREF9430_01263	223.0	0	N/A	N/A
structural_annotation	UHGV-1427837_14	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1427837_15	phrog_137	93.2	1.8e-27	head-tail adaptor Ad1	connector
UniRef90	UHGV-1427837_15	UniRef90_E7MNZ3	235.0	0	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-1427837_15	706433.HMPREF9430_01264	235.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1427837_15	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1427837_15	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1427837_17	phrog_32396	127.3	4.5e-38	N/A	unknown function
UniRef90	UHGV-1427837_17	UniRef90_A0A7X2NQN8	449.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1427837_17	706433.HMPREF9430_01265	553.0	0	Phage capsid family	N/A
Pfam	UHGV-1427837_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1427837_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1427837_17	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1427837_18	phrog_233	93.2	6.5e-28	head scaffolding protein	head and packaging
UniRef90	UHGV-1427837_18	UniRef90_A0A890GYE3	216.0	0	N/A	N/A
eggNOG-mapper	UHGV-1427837_18	706433.HMPREF9430_01266	229.0	0	N/A	N/A
Pfam	UHGV-1427837_18	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1427837_18	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1427837_19	phrog_17688	342.3	0	N/A	unknown function
UniRef90	UHGV-1427837_19	UniRef90_E7MNZ6	917.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1427837_19	706433.HMPREF9430_01267	917.0	0	phage terminase, large subunit	N/A
COG	UHGV-1427837_19	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1427837_19	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1427837_21	phrog_2494	63.0	1.2e-18	minor head protein	head and packaging
UniRef90	UHGV-1427837_21	UniRef90_UPI00195F2AE2	112.0	4.35e-23	minor capsid protein	N/A
eggNOG-mapper	UHGV-1427837_21	887325.HMPREF0381_0084	135.0	1.01e-31	Phage Mu protein F like protein	N/A
COG	UHGV-1427837_21	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1427837_22	phrog_104	267.3	0	portal protein	head and packaging
UniRef90	UHGV-1427837_22	UniRef90_A0A890GW77	736.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1427837_22	706433.HMPREF9430_01270	712.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1427837_22	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1427837_24	679192.HMPREF9013_1311	51.2	0.00000434	N/A	N/A
structural_annotation	UHGV-1427837_24	PF04545,MF_00674,TIGR01636,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-1427837_26	K06223	230.7	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1427837_26	phrog_56	196.6	0	DNA methyltransferase	other
UniRef90	UHGV-1427837_26	UniRef90_UPI000407626D	515.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-1427837_26	1123263.AUKY01000122_gene1741	515.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1427837_26	MTase_II_00030	249.5	0	Type II methyltransferase	RM
Pfam	UHGV-1427837_26	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-1427837_26	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-1427837_26	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1427837_27	PF08962,COG2388	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1427837_28	1123263.AUKY01000122_gene1747	161.0	0	N/A	N/A