UHGV-1427906 (vOTU-061911)

Viral Genome: UHGV-1427906

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1427906
vOTU ID	vOTU-061911
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0277068
Associated BioSample	SAMEA2784461
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	95.6 (High-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9748
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	6.89
Jumbo phage	No

Genome content
Genome length (bp)	41,643
GC content	62.18%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	95%
Average CDS length (bps)	717.98
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 95.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1427906_1	phrog_22978	239.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1427906_1	1226322.HMPREF1545_00787	81.6	0.000000000000419	N/A	N/A
eggNOG-mapper	UHGV-1427906_2	1226322.HMPREF1545_00786	241.0	0	N/A	N/A
PHROG	UHGV-1427906_3	phrog_511	208.2	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1427906_3	1519439.JPJG01000060_gene1903	428.0	0	N/A	N/A
structural_annotation	UHGV-1427906_3	PF11134,NF038015,TIGR03721,COG3823	N/A	N/A	N/A	N/A
UniRef90	UHGV-1427906_5	UniRef90_UPI00110693DB	77.4	0.00000000000297	gp58-like family protein	N/A
eggNOG-mapper	UHGV-1427906_5	1226322.HMPREF1545_00783	72.4	0.0000000000368	Chaperone of endosialidase	N/A
structural_annotation	UHGV-1427906_5	PF07902,NF041249	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1427906_6	1007096.BAGW01000022_gene2650	47.4	0.00000533	N/A	N/A
KOfam	UHGV-1427906_7	K07273	128.2	7.7e-38	acm; lysozyme	N/A
PHROG	UHGV-1427906_7	phrog_291	116.5	2.8e-34	endolysin	lysis
UniRef90	UHGV-1427906_7	UniRef90_A0A318EI28	128.0	8.46e-32	GH25 family lysozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
eggNOG-mapper	UHGV-1427906_7	483218.BACPEC_02724	127.0	6.1e-30	Hydrolase Family 25	N/A
Pfam	UHGV-1427906_7	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1427906_7	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
eggNOG-mapper	UHGV-1427906_8	1007096.BAGW01000017_gene815	58.5	0.000000000255	N/A	N/A
PHROG	UHGV-1427906_9	phrog_9428	147.6	2.10195e-44	N/A	unknown function
UniRef90	UHGV-1427906_9	UniRef90_UPI0019685E42	139.0	1.12999e-40	serine/threonine protein kinase	N/A
eggNOG-mapper	UHGV-1427906_9	1226322.HMPREF1545_03573	134.0	2.65e-39	N/A	N/A
PHROG	UHGV-1427906_10	phrog_30034	110.4	2.2e-32	N/A	unknown function
UniRef90	UHGV-1427906_10	UniRef90_A0A3D1XGA4	231.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1427906_10	411471.SUBVAR_06976	82.8	8.28e-18	N/A	N/A
Pfam	UHGV-1427906_10	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-1427906_11	phrog_32779	45.0	0.00000000000028	N/A	unknown function
eggNOG-mapper	UHGV-1427906_12	756499.Desde_3162	67.0	0.000000000402	nuclear chromosome segregation	N/A
COG	UHGV-1427906_12	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
KOfam	UHGV-1427906_13	K16628	52.3	0.0000000000000021	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1427906_13	phrog_819	100.1	1.9e-29	tail protein	tail
eggNOG-mapper	UHGV-1427906_13	1232443.BAIA02000078_gene14	75.1	0.00000000000318	nuclear chromosome segregation	N/A
Pfam	UHGV-1427906_13	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1427906_13	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1427906_14	phrog_12105	110.6	9.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-1427906_14	1226322.HMPREF1545_03850	100.0	2.27e-25	N/A	N/A
PHROG	UHGV-1427906_15	phrog_371	164.3	0	major head protein	head and packaging
UniRef90	UHGV-1427906_15	UniRef90_UPI00164C0E21	331.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-1427906_15	1226322.HMPREF1545_03848	419.0	0	N/A	N/A
Pfam	UHGV-1427906_15	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-1427906_15	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1427906_16	phrog_24113	172.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1427906_16	1226322.HMPREF1545_03847	168.0	0	N/A	N/A
structural_annotation	UHGV-1427906_16	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-1427906_17	phrog_35275	191.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1427906_17	1226322.HMPREF1545_03846	162.0	9.80909e-45	N/A	N/A
PHROG	UHGV-1427906_19	phrog_156	315.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1427906_19	1519439.JPJG01000060_gene1886	620.0	0	N/A	N/A
structural_annotation	UHGV-1427906_19	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1427906_20	K06909	217.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1427906_20	phrog_3717	186.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1427906_20	UniRef90_A0A1Y3SBH0	646.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1427906_20	1519439.JPJG01000060_gene1885	634.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-1427906_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-1427906_20	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1427906_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1427906_20	PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1427906_21	phrog_606	46.9	0.00000000000032	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-1427906_21	1519439.JPJG01000060_gene1884	106.0	1.73e-26	DNA-packaging protein gp3	N/A
Pfam	UHGV-1427906_21	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1427906_21	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1427906_22	phrog_3584	138.5	4.19997e-41	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1427906_22	1203606.HMPREF1526_00985	139.0	9.78e-38	N/A	N/A
structural_annotation	UHGV-1427906_22	PF21578,NF041486	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1427906_27	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1427906_28	689781.AUJX01000009_gene401	58.2	0.0000000148	N/A	N/A
structural_annotation	UHGV-1427906_28	PF13384,NF040595	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1427906_29	PF10013	N/A	N/A	N/A	N/A
PHROG	UHGV-1427906_32	phrog_474	111.1	1.4e-32	phosphofructokinase	other
UniRef90	UHGV-1427906_32	UniRef90_A0A316NLA2	111.0	6.63e-30	N/A	N/A
eggNOG-mapper	UHGV-1427906_32	428125.CLOLEP_01367	100.0	1.11e-26	N/A	N/A
Pfam	UHGV-1427906_32	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-1427906_32	PF19905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1427906_34	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-1427906_37	phrog_1384	127.6	8.2e-38	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-1427906_37	665956.HMPREF1032_03086	254.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-1427906_37	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
KOfam	UHGV-1427906_38	K07729	43.3	0.000000000007	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1427906_38	phrog_1373	40.3	0.000000000043	transcriptional regulator	transcription regulation
Pfam	UHGV-1427906_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1427906_38	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-1427906_40	phrog_3777	44.5	0.0000000000016	N/A	unknown function
Pfam	UHGV-1427906_40	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-1427906_40	PF12957	N/A	N/A	N/A	N/A
KOfam	UHGV-1427906_41	K02314	279.6	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1427906_41	phrog_19	263.9	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1427906_41	UniRef90_A0A1Y3RCT6	338.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1427906_41	1226322.HMPREF1545_00095	284.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-1427906_41	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1427906_41	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1427906_41	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1427906_41	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1427906_42	phrog_270	106.8	2.6e-31	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1427906_42	1395516.PMO01_03040	71.6	0.00000000000938	Helix-turn-helix domain	N/A
COG	UHGV-1427906_42	COG0640	N/A	N/A	DNA-binding transcriptional regulator, ArsR family	N/A
structural_annotation	UHGV-1427906_42	PF04182,NF040939,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-1427906_46	K22300	67.5	2.8e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1427906_46	phrog_4	51.5	0.000000000000024	transcriptional repressor	transcription regulation
UniRef90	UHGV-1427906_46	UniRef90_A0A3D5LEN7	111.0	2.91e-29	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1427906_46	1235797.C816_03553	109.0	1.56e-28	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1427906_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1427906_46	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1427906_46	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1427906_47	748224.HMPREF9436_01806	60.1	0.0000000488	Metallo-beta-lactamase domain protein	N/A
Pfam	UHGV-1427906_47	PF02805	N/A	N/A	Metal binding domain of Ada	Ada_Zn_binding
COG	UHGV-1427906_47	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
structural_annotation	UHGV-1427906_49	PF13560,MF_00535,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1427906_51	K14059	235.8	0	int; integrase	N/A
PHROG	UHGV-1427906_51	phrog_1	210.3	0	integrase	integration and excision
UniRef90	UHGV-1427906_51	UniRef90_UPI0019585560	407.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1427906_51	1321814.HMPREF9089_00905	202.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-1427906_51	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1427906_51	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1427906_51	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1427906_51	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1427906_55	phrog_21376	52.8	3.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-1427906_55	1226322.HMPREF1545_00787	647.0	0	N/A	N/A
Pfam	UHGV-1427906_55	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-1427906_55	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal