UHGV-1430840 (vOTU-073476)

Viral Genome: UHGV-1430840

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1430840
vOTU ID	vOTU-073476
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0268760
Associated BioSample	SAMN00791908
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	97.18 (High-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9819
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	46.37
Jumbo phage	No

Genome content
Genome length (bp)	40,041
GC content	53.70%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	72
CDS density	95%
Average CDS length (bps)	525.96
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.18)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1430840_1	phrog_27197	65.0	1.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1430840_1	573061.Clocel_3578	51.6	0.00000123	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1430840_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-1430840_2	phrog_124	115.5	4.4e-34	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430840_2	UniRef90_A0A2Z4QBI4	395.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-1430840_2	718252.FP2_01060	218.0	0	AAA domain	N/A
Pfam	UHGV-1430840_2	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-1430840_2	COG1100	N/A	N/A	GTPase SAR1 family domain	N/A
structural_annotation	UHGV-1430840_2	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
UniRef90	UHGV-1430840_3	UniRef90_A0A2Z4QA33	238.0	0	PD-(D/E)XK nuclease	N/A
eggNOG-mapper	UHGV-1430840_3	718252.FP2_01050	129.0	1.3e-34	N/A	N/A
structural_annotation	UHGV-1430840_3	PF10926,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_4	phrog_378	97.8	1.2e-28	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430840_4	UniRef90_UPI001E43F9BA	68.2	0.0000000000167	N/A	N/A
eggNOG-mapper	UHGV-1430840_4	1423732.BALS01000134_gene393	66.6	0.000000000016	N/A	N/A
structural_annotation	UHGV-1430840_4	PF05037,NF004948	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_5	phrog_16304	58.2	1.6e-16	N/A	unknown function
UniRef90	UHGV-1430840_5	UniRef90_A0A3D3Y5P0	220.0	0	N/A	N/A
Pfam	UHGV-1430840_5	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1430840_5	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1430840_5	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_6	phrog_111	166.6	0	DNA methyltransferase	other
UniRef90	UHGV-1430840_6	UniRef90_A0A1Y4EVK6	227.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-1430840_6	1121121.KB894312_gene3179	206.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-1430840_6	oMTase_00015	194.5	0	orphan methyltransferase	RM
Pfam	UHGV-1430840_6	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-1430840_6	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
KOfam	UHGV-1430840_8	K00390	46.1	3.9e-27	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1430840_8	phrog_424	98.6	4.8e-29	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1430840_8	UniRef90_A0A098AU96	574.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes	N/A
eggNOG-mapper	UHGV-1430840_8	1235800.C819_02256	517.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1430840_8	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1430840_8	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1430840_8	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-1430840_9	UniRef90_UPI001D064D4E	117.0	1.31e-30	N/A	N/A
Pfam	UHGV-1430840_9	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1430840_9	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_10	phrog_3136	137.5	2.89999e-41	N/A	unknown function
UniRef90	UHGV-1430840_10	UniRef90_A0A329TS47	176.0	0	ASCH domain-containing protein	N/A
COG	UHGV-1430840_10	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1430840_10	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_11	phrog_38832	59.9	1.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-1430840_11	665956.HMPREF1032_00143	66.6	0.0000000000281	N/A	N/A
structural_annotation	UHGV-1430840_12	PF12092	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_13	phrog_2118	101.7	8.7e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1430840_13	UniRef90_A0A417HX51	212.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1430840_13	742740.HMPREF9474_03129	129.0	3.91e-37	HNH endonuclease	N/A
Pfam	UHGV-1430840_13	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1430840_13	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1430840_13	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_14	phrog_31029	64.9	9.5e-19	N/A	unknown function
PHROG	UHGV-1430840_15	phrog_599	43.4	0.0000000000071	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1430840_15	UniRef90_A0A412AWF1	56.6	0.00000000367	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-1430840_15	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1430840_15	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-1430840_15	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-1430840_15	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_19	phrog_1770	53.8	0.0000000000000037	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1430840_19	536233.CLO_1822	154.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1430840_19	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430840_24	742738.HMPREF9460_02503	72.8	7.41e-16	N/A	N/A
structural_annotation	UHGV-1430840_24	PF02001,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1430840_25	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-1430840_26	K07474	103.7	3.3e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1430840_26	phrog_51	113.4	1.6e-33	terminase small subunit	head and packaging
UniRef90	UHGV-1430840_26	UniRef90_A0A396NMY4	131.0	9.86e-37	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1430840_26	476272.RUMHYD_01754	126.0	1.51e-35	Terminase small subunit	N/A
Pfam	UHGV-1430840_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1430840_26	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1430840_26	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1430840_27	K06909	135.7	4.1e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1430840_27	phrog_10250	161.3	0	N/A	unknown function
UniRef90	UHGV-1430840_27	UniRef90_UPI0018A99FCF	611.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1430840_27	476272.RUMHYD_01756	454.0	0	N/A	N/A
Pfam	UHGV-1430840_27	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1430840_27	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1430840_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1430840_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1430840_27	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_28	phrog_64	151.0	2.8026e-45	portal protein	head and packaging
UniRef90	UHGV-1430840_28	UniRef90_UPI001AA0B7FF	497.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1430840_28	673376.F2VHW1_9CAUD	223.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1430840_28	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1430840_28	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1430840_29	PF10651,NF038186	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430840_31	411471.SUBVAR_06929	311.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1430840_31	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-1430840_32	phrog_37900	319.2	0	N/A	unknown function
UniRef90	UHGV-1430840_32	UniRef90_UPI001C3EA4DF	345.0	0	N/A	N/A
eggNOG-mapper	UHGV-1430840_32	552398.HMPREF0866_03098	251.0	0	N/A	N/A
Pfam	UHGV-1430840_32	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1430840_32	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1430840_32	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_33	phrog_29409	44.1	0.0000000000025	N/A	unknown function
structural_annotation	UHGV-1430840_35	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_36	phrog_595	124.0	1.7e-36	head maturation protease	head and packaging
UniRef90	UHGV-1430840_36	UniRef90_A0A810PSD3	441.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1430840_36	1504822.CCNO01000013_gene286	218.0	0	cell adhesion	N/A
Pfam	UHGV-1430840_36	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1430840_36	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1430840_36	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1430840_36	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_37	phrog_5	76.2	6.2e-22	tail completion or Neck1 protein	connector
UniRef90	UHGV-1430840_37	UniRef90_UPI0018AA0B5A	184.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1430840_37	1280685.AUKC01000004_gene1630	98.2	1.73e-24	N/A	N/A
Pfam	UHGV-1430840_37	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1430840_37	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1430840_37	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_38	phrog_194	44.3	0.0000000000031	head scaffolding protein	head and packaging
UniRef90	UHGV-1430840_38	UniRef90_A0A6B9SU02	148.0	1.59005e-41	Fibronectin autolysin	N/A
eggNOG-mapper	UHGV-1430840_38	476272.RUMHYD_01775	58.5	0.0000000659	COG NOG36366 non supervised orthologous group	N/A
structural_annotation	UHGV-1430840_38	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_39	phrog_544	132.4	2.6e-39	major head protein	head and packaging
UniRef90	UHGV-1430840_39	UniRef90_A0A1C6B5R0	593.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1430840_39	1232453.BAIF02000011_gene3359	369.0	0	N/A	N/A
Pfam	UHGV-1430840_39	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1430840_39	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_41	phrog_17977	80.4	1.5e-23	N/A	unknown function
UniRef90	UHGV-1430840_41	UniRef90_UPI00141211AB	115.0	7.02e-31	head-tail adaptor protein	N/A
structural_annotation	UHGV-1430840_41	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1430840_42	UniRef90_A0A415JI88	124.0	3.48e-34	N/A	N/A
structural_annotation	UHGV-1430840_42	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_43	phrog_885	78.5	7.2e-23	major tail protein	tail
UniRef90	UHGV-1430840_43	UniRef90_A0A843J9F0	217.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1430840_43	1504822.CCNO01000012_gene492	247.0	0	N/A	N/A
structural_annotation	UHGV-1430840_43	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_44	phrog_18646	62.4	7.9e-18	N/A	unknown function
UniRef90	UHGV-1430840_44	UniRef90_B6CXF0	72.0	0.0000000000000746	Peptidase-colicin	N/A
PHROG	UHGV-1430840_46	phrog_6900	267.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1430840_46	1123312.KB904569_gene357	308.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-1430840_46	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1430840_46	MF_04138,COG5281	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1430840_47	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_48	phrog_13879	166.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1430840_48	1122919.KB905559_gene1344	160.0	1.48e-40	N/A	N/A
structural_annotation	UHGV-1430840_48	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_49	phrog_18725	98.5	5.9e-29	N/A	unknown function
eggNOG-mapper	UHGV-1430840_49	693746.OBV_18220	127.0	4.09e-35	N/A	N/A
Pfam	UHGV-1430840_50	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1430840_50	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
Pfam	UHGV-1430840_51	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1430840_51	PF07484	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_54	phrog_13256	67.2	1.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1430840_54	1226322.HMPREF1545_00132	73.6	2.37e-16	N/A	N/A
PHROG	UHGV-1430840_55	phrog_14030	146.2	1.90577e-43	N/A	unknown function
UniRef90	UHGV-1430840_55	UniRef90_R6LL81	245.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1430840_55	1121866.AUGK01000003_gene1444	89.4	1.13e-17	amidase activity	N/A
COG	UHGV-1430840_55	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1430840_56	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430840_59	760568.Desku_0885	58.5	0.0000000499	N/A	N/A
structural_annotation	UHGV-1430840_59	PF14528,PF05204,MF_01420,TIGR00647,COG3780	N/A	N/A	N/A	N/A
UniRef90	UHGV-1430840_60	UniRef90_UPI00164AED9E	87.8	3.12e-20	helix-turn-helix domain-containing protein	N/A
COG	UHGV-1430840_60	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1430840_60	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_61	phrog_3754	91.8	7.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-1430840_61	476272.RUMHYD_01764	162.0	0	N/A	N/A
PHROG	UHGV-1430840_62	phrog_21718	103.1	2.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-1430840_62	397290.C810_05210	59.3	0.00000000819	N/A	N/A
PHROG	UHGV-1430840_63	phrog_22984	76.1	1.1e-22	N/A	unknown function
PHROG	UHGV-1430840_64	phrog_16490	126.2	4.8e-38	N/A	unknown function
eggNOG-mapper	UHGV-1430840_64	1408437.JNJN01000043_gene803	132.0	3.75e-35	N/A	N/A
PHROG	UHGV-1430840_65	phrog_20016	195.2	0	N/A	unknown function
UniRef90	UHGV-1430840_65	UniRef90_A0A285PT46	189.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1430840_65	1226322.HMPREF1545_00077	171.0	0	N/A	N/A
structural_annotation	UHGV-1430840_65	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1430840_66	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1430840_67	1226322.HMPREF1545_00079	107.0	7.99e-29	N/A	N/A
KOfam	UHGV-1430840_68	K14059	128.9	6.5e-38	int; integrase	N/A
PHROG	UHGV-1430840_68	phrog_1	140.9	1.10002e-41	integrase	integration and excision
UniRef90	UHGV-1430840_68	UniRef90_UPI00195CC1EE	377.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1430840_68	1235835.C814_03141	194.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1430840_68	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1430840_68	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1430840_68	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
Pfam	UHGV-1430840_69	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1430840_69	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1430840_69	PF12844	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1430840_71	PF03965,MF_01819,NF012168,COG3682	N/A	N/A	N/A	N/A
PHROG	UHGV-1430840_72	phrog_8	47.3	0.0000000000005	transcriptional regulator	transcription regulation
UniRef90	UHGV-1430840_72	UniRef90_UPI001E54DE4F	80.9	1.28e-17	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1430840_72	1378168.N510_01712	66.6	0.0000000000113	N/A	N/A
Pfam	UHGV-1430840_72	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1430840_72	PF12844,NF007257,COG3655	N/A	N/A	N/A	N/A