UHGV-1433187 (vOTU-086848)

Viral Genome: UHGV-1433187

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1433187
vOTU ID	vOTU-086848
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0217877
Associated BioSample	SAMEA2467039
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	92.06 (High-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9803
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	42.47
Jumbo phage	No

Genome content
Genome length (bp)	31,178
GC content	45.96%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	92%
Average CDS length (bps)	562.06
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 92.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1433187_1	K06907	89.4	3.7e-26	N/A	N/A
PHROG	UHGV-1433187_1	phrog_23	109.2	1.6e-32	tail sheath	tail
UniRef90	UHGV-1433187_1	UniRef90_A0A1Y4B588	539.0	0	Phage tail sheath protein	N/A
eggNOG-mapper	UHGV-1433187_1	537007.BLAHAN_04241	736.0	0	COG3497 Phage tail sheath protein FI	N/A
COG	UHGV-1433187_1	COG3497	N/A	N/A	Phage tail sheath protein FI	N/A
PHROG	UHGV-1433187_2	phrog_2581	191.2	0	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1433187_2	537007.BLAHAN_04240	444.0	0	N/A	N/A
structural_annotation	UHGV-1433187_2	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_3	phrog_2551	116.5	1.2e-34	minor tail protein	tail
UniRef90	UHGV-1433187_3	UniRef90_A0A849CSI3	79.7	4.25e-17	Sugar ABC transporter ATP-binding protein	N/A
eggNOG-mapper	UHGV-1433187_3	537007.BLAHAN_04239	206.0	0	N/A	N/A
structural_annotation	UHGV-1433187_3	PF13856	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_4	phrog_3281	96.2	2e-28	endonuclease VII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433187_4	UniRef90_A0A7X3MHX3	94.0	8.06e-23	Response regulator receiver protein	N/A
eggNOG-mapper	UHGV-1433187_4	537007.BLAHAN_04238	183.0	0	N/A	N/A
PHROG	UHGV-1433187_5	phrog_3281	133.0	7.5e-40	endonuclease VII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433187_5	UniRef90_UPI001D073164	130.0	4.24e-37	Rho termination factor N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1433187_5	1519439.JPJG01000059_gene1925	61.6	0.000000000334	N/A	N/A
structural_annotation	UHGV-1433187_5	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_6	phrog_29	205.5	0	major head protein	head and packaging
UniRef90	UHGV-1433187_6	UniRef90_A0A3A9D854	581.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1433187_6	411483.FAEPRAA2165_01902	725.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1433187_6	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1433187_6	PF03864,MF_04133,TIGR04387,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1433187_7	K14059	142.2	6.09985e-42	int; integrase	N/A
PHROG	UHGV-1433187_7	phrog_1	162.3	0	integrase	integration and excision
UniRef90	UHGV-1433187_7	UniRef90_A0A7C9H3C8	696.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1433187_7	1235792.C808_01553	463.0	0	Phage integrase family	N/A
Pfam	UHGV-1433187_7	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1433187_7	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1433187_7	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1433187_7	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1433187_8	K23779	63.3	5.4e-18	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-1433187_8	phrog_8	50.9	0.000000000000038	transcriptional regulator	transcription regulation
UniRef90	UHGV-1433187_8	UniRef90_A0A7C9H3W9	119.0	2.55e-34	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1433187_8	742741.HMPREF9475_00399	69.7	0.00000000000000316	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-1433187_8	retron_type_VI_hth_cluster2_1	42.3	0.000000000021	N/A	Retron
Pfam	UHGV-1433187_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1433187_8	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1433187_9	K22300	56.6	6.1e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1433187_9	phrog_8	46.9	0.00000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-1433187_9	UniRef90_A0A350VVA1	158.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1433187_9	641107.CDLVIII_1309	141.0	7.56001e-42	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1433187_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1433187_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1433187_9	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_15	phrog_38056	67.0	1.6e-19	N/A	unknown function
UniRef90	UHGV-1433187_16	UniRef90_UPI000F05D0D4	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-1433187_16	411470.RUMGNA_02039	211.0	0	N/A	N/A
Pfam	UHGV-1433187_16	PF10979	N/A	N/A	N/A	DUF2786
PHROG	UHGV-1433187_21	phrog_6058	60.0	2.7e-17	N/A	unknown function
UniRef90	UHGV-1433187_21	UniRef90_A0A6B9SRW8	69.3	0.0000000000000501	Putative Xis protein	N/A
eggNOG-mapper	UHGV-1433187_21	411468.CLOSCI_01465	71.2	0.00000000000000142	N/A	N/A
structural_annotation	UHGV-1433187_21	PF12728,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_22	phrog_28939	54.7	0.0000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-1433187_22	411470.RUMGNA_02053	57.4	0.000000000584	N/A	N/A
PHROG	UHGV-1433187_23	phrog_20014	51.7	0.000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1433187_23	1235798.C817_02590	72.0	0.00000000000000311	N/A	N/A
PHROG	UHGV-1433187_24	phrog_26861	127.3	4.4e-38	N/A	unknown function
UniRef90	UHGV-1433187_24	UniRef90_A0A7C9LD13	385.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1433187_24	397290.C810_00400	130.0	5.06e-35	single-stranded DNA binding	N/A
Pfam	UHGV-1433187_24	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-1433187_24	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1433187_24	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_25	phrog_9958	49.6	0.000000000000033	N/A	unknown function
UniRef90	UHGV-1433187_25	UniRef90_A0A7C9HA55	370.0	0	N/A	N/A
Pfam	UHGV-1433187_25	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1433187_25	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_26	phrog_3584	208.3	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1433187_26	397290.C810_00404	377.0	0	N/A	N/A
structural_annotation	UHGV-1433187_26	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_27	phrog_824	146.3	8.26766e-44	N/A	unknown function
UniRef90	UHGV-1433187_27	UniRef90_A0A7C9H491	279.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1433187_27	397290.C810_00407	167.0	0	VRR_NUC	N/A
Pfam	UHGV-1433187_27	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1433187_27	PF08774	N/A	N/A	N/A	N/A
KOfam	UHGV-1433187_29	K03496	164.9	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1433187_29	phrog_164	145.2	4.49817e-43	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433187_29	UniRef90_A0A7C9H418	517.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1433187_29	397288.C806_00082	271.0	0	AAA domain	N/A
Pfam	UHGV-1433187_29	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1433187_29	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1433187_29	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-1433187_30	K03497	62.7	6.2e-19	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1433187_30	phrog_15982	233.3	0	N/A	unknown function
UniRef90	UHGV-1433187_30	UniRef90_A0A7C9HAH3	749.0	0	N/A	N/A
eggNOG-mapper	UHGV-1433187_30	411470.RUMGNA_02052	454.0	0	N/A	N/A
Pfam	UHGV-1433187_30	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1433187_30	PF12961	N/A	N/A	N/A	DUF3850
COG	UHGV-1433187_30	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1433187_30	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
UniRef90	UHGV-1433187_31	UniRef90_A0A396NNM4	56.2	0.0000000217	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1433187_31	411470.RUMGNA_02055	58.2	0.000000000641	N/A	N/A
KOfam	UHGV-1433187_33	K03111	96.1	6.1e-28	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1433187_33	phrog_44	112.5	4.1e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433187_33	UniRef90_A0A7C9H3C2	276.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1433187_33	411470.RUMGNA_02057	172.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1433187_33	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1433187_33	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1433187_33	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1433187_33	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_34	phrog_1558	156.4	0	N/A	unknown function
UniRef90	UHGV-1433187_34	UniRef90_UPI001EE9266C	157.0	0	sigma-70 region 4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1433187_34	411470.RUMGNA_02058	214.0	0	N/A	N/A
structural_annotation	UHGV-1433187_34	PF08281,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1433187_35	K07451	42.9	0.0000000000081	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1433187_35	phrog_119	74.5	1.4e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1433187_35	UniRef90_A0A7C9KZ74	187.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1433187_35	397290.C810_00416	145.0	2.10195e-44	HNH endonuclease	N/A
Pfam	UHGV-1433187_35	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1433187_35	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1433187_36	phrog_1066	106.4	1.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-1433187_36	411470.RUMGNA_02061	173.0	0	N/A	N/A
structural_annotation	UHGV-1433187_36	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_37	phrog_9	366.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-1433187_37	UniRef90_A0A7C9KZF1	1085.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-1433187_37	397290.C810_00418	946.0	0	Phage Terminase	N/A
Pfam	UHGV-1433187_37	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1433187_37	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1433187_37	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1433187_37	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_38	phrog_12	107.0	1.4e-31	portal protein	head and packaging
UniRef90	UHGV-1433187_38	UniRef90_A0A7C9LEF5	790.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1433187_38	411470.RUMGNA_02063	620.0	0	Phage portal protein	N/A
Pfam	UHGV-1433187_38	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1433187_38	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1433187_38	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1433187_39	K06904	114.5	1.2e-33	N/A	N/A
PHROG	UHGV-1433187_39	phrog_80	136.1	3.09999e-40	head maturation protease	head and packaging
UniRef90	UHGV-1433187_39	UniRef90_A0A7C9L2H1	363.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1433187_39	397290.C810_00420	275.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1433187_39	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1433187_39	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1433187_39	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1433187_39	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_40	phrog_10	157.9	0	major head protein	head and packaging
UniRef90	UHGV-1433187_40	UniRef90_C9LCN3	653.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-1433187_40	411470.RUMGNA_02065	653.0	0	N/A	N/A
Pfam	UHGV-1433187_40	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1433187_40	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1433187_40	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1433187_40	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1433187_41	UniRef90_A0A7C9LC86	174.0	0	SAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1433187_41	411470.RUMGNA_02066	50.8	0.0000076	membrane spanning protein TolA K03646	N/A
Pfam	UHGV-1433187_41	PF02037	N/A	N/A	SAP domain	SAP
COG	UHGV-1433187_41	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1433187_41	PF14000	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_42	phrog_5223	84.5	6.5e-25	neck protein	connector
UniRef90	UHGV-1433187_42	UniRef90_A0A7C9LAV1	186.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1433187_42	397290.C810_00423	92.0	6.41e-23	N/A	N/A
PHROG	UHGV-1433187_43	phrog_1951	72.4	4.9e-21	head-tail adaptor	connector
UniRef90	UHGV-1433187_43	UniRef90_UPI00189EBA11	70.9	0.0000000000000368	phage head closure protein	N/A
eggNOG-mapper	UHGV-1433187_43	491915.Aflv_0668	49.3	0.00000241	head-tail adaptor	N/A
COG	UHGV-1433187_43	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1433187_43	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1433187_44	UniRef90_A0A7C9LD40	222.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1433187_44	411468.CLOSCI_00545	109.0	3.93e-29	COG NOG18351 non supervised orthologous group	N/A
Pfam	UHGV-1433187_44	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1433187_44	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1433187_45	411468.CLOSCI_00544	92.8	7.12e-23	N/A	N/A
structural_annotation	UHGV-1433187_45	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_46	phrog_2175	83.2	3.4e-24	protein with Ig domain	other
eggNOG-mapper	UHGV-1433187_46	457421.CBFG_03714	219.0	0	N/A	N/A
structural_annotation	UHGV-1433187_46	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1433187_47	411468.CLOSCI_00542	95.5	4.25e-24	N/A	N/A
structural_annotation	UHGV-1433187_47	PF17388	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1433187_48	411468.CLOSCI_00541	68.6	0.00000000000000703	N/A	N/A
PHROG	UHGV-1433187_49	phrog_1272	460.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1433187_49	UniRef90_A0A0M6WZJ0	540.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1433187_49	180332.JTGN01000004_gene2272	317.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1433187_49	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1433187_49	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1433187_49	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1433187_49	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_50	phrog_33	83.0	5.6e-24	distal tail protein Dit	tail
UniRef90	UHGV-1433187_50	UniRef90_UPI00164BA811	153.0	3.38974e-42	phage tail family protein	N/A
eggNOG-mapper	UHGV-1433187_50	1160721.RBI_I01575	153.0	6.02558e-43	Phage tail protein	N/A
COG	UHGV-1433187_50	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1433187_50	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1433187_51	phrog_1067	310.3	0	minor head protein	head and packaging
UniRef90	UHGV-1433187_51	UniRef90_A0A0M6WYA7	387.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1433187_51	1160721.RBI_I01574	330.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1433187_51	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1433187_51	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1433187_51	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1433187_51	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A