UHGV-1434887 (vOTU-028339)

Viral Genome: UHGV-1434887

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1434887
vOTU ID	vOTU-028339
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0223666
Associated BioSample	SAMN06328475
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	87.92 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	24
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9806
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	55.99
Jumbo phage	No

Genome content
Genome length (bp)	32,170
GC content	37.91%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	50
CDS density	92%
Average CDS length (bps)	594.96
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 87.92)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1434887_1	K22306	54.6	0.0000000000000027	gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]	N/A
PHROG	UHGV-1434887_1	phrog_12933	41.2	0.000000000034	N/A	unknown function
UniRef90	UHGV-1434887_1	UniRef90_UPI000668CA52	63.5	0.00000000000244	phosphoglycerate mutase family protein	N/A
eggNOG-mapper	UHGV-1434887_1	1504823.CCMM01000013_gene2804	71.6	0.00000000000000463	alpha-ribazole phosphatase activity	N/A
Pfam	UHGV-1434887_1	PF00300	N/A	N/A	Histidine phosphatase superfamily (branch 1)	His_Phos_1
COG	UHGV-1434887_1	COG0406	N/A	N/A	Broad specificity phosphatase PhoE	N/A
KOfam	UHGV-1434887_2	K14059	97.2	3e-28	int; integrase	N/A
PHROG	UHGV-1434887_2	phrog_1	122.4	5.3e-36	integrase	integration and excision
UniRef90	UHGV-1434887_2	UniRef90_E2NR65	711.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-1434887_2	1504823.CCMM01000008_gene1083	392.0	0	DNA integration	N/A
Pfam	UHGV-1434887_2	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-1434887_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1434887_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1434887_2	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_3	phrog_13160	44.4	0.000000000000089	N/A	unknown function
UniRef90	UHGV-1434887_3	UniRef90_UPI001C381EC6	486.0	0	Ig-like domain-containing protein	N/A
Pfam	UHGV-1434887_3	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-1434887_3	COG0584	N/A	N/A	Glycerophosphoryl diester phosphodiesterase	N/A
structural_annotation	UHGV-1434887_3	PF13028	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_4	phrog_8	41.2	0.000000000038	transcriptional regulator	transcription regulation
UniRef90	UHGV-1434887_4	UniRef90_UPI001C38C99F	156.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1434887_4	1078085.HMPREF1210_01183	48.5	0.00000572	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1434887_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1434887_4	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1434887_4	PF13560,NF041677,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1434887_5	UniRef90_UPI001C386214	125.0	1.31e-36	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1434887_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1434887_5	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1434887_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1434887_6	K07741	171.0	0	antB; anti-repressor protein	N/A
PHROG	UHGV-1434887_6	phrog_63	156.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1434887_6	UniRef90_UPI00067F3EAD	337.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1434887_6	1499683.CCFF01000017_gene2614	288.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-1434887_6	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1434887_6	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1434887_6	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1434887_6	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-1434887_7	UniRef90_A0A415XFB8	94.7	1.03e-23	DNA-binding protein	N/A
structural_annotation	UHGV-1434887_7	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_11	phrog_434	163.6	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1434887_11	UniRef90_A0A6N9L4Y3	443.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-1434887_11	888055.HMPREF9015_01894	125.0	7.6e-33	YqaJ viral recombinase family	N/A
Pfam	UHGV-1434887_11	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1434887_11	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1434887_11	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1434887_11	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-1434887_12	UniRef90_A0A412KEL9	55.1	0.0000000144	XRE family transcriptional regulator	N/A
PHROG	UHGV-1434887_13	phrog_674	83.3	2.1e-24	N/A	unknown function
UniRef90	UHGV-1434887_13	UniRef90_UPI001C383633	720.0	0	N/A	N/A
eggNOG-mapper	UHGV-1434887_13	1234679.BN424_3317	69.7	0.000000000295	N/A	N/A
Pfam	UHGV-1434887_13	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1434887_13	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-1434887_14	K07455	210.3	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1434887_14	phrog_148	226.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1434887_14	UniRef90_A0A6N9L4X4	559.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-1434887_14	1095750.HMPREF9970_1675	365.0	0	RecT family	N/A
Pfam	UHGV-1434887_14	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1434887_14	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1434887_14	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1434887_14	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_15	phrog_186	59.2	2.5e-17	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1434887_15	UniRef90_UPI001C395B09	249.0	0	winged helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1434887_15	1147044.H9A0L9_9CAUD	63.2	0.00000000944	calcium ion binding	N/A
structural_annotation	UHGV-1434887_15	PF09681,NF033788,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_19	phrog_2245	63.7	3.1e-18	nucleoside triphosphate pyrophosphohydrolase	other
Pfam	UHGV-1434887_19	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
structural_annotation	UHGV-1434887_19	NF001613,COG1694	N/A	N/A	N/A	N/A
KOfam	UHGV-1434887_22	K03111	142.2	5.59959e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1434887_22	phrog_44	149.1	2.38221e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1434887_22	UniRef90_UPI0006C3F2C5	278.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1434887_22	428126.CLOSPI_02450	155.0	0	COG COG0629 Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1434887_22	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1434887_22	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1434887_22	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1434887_22	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1434887_22	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_23	phrog_190	134.6	6e-40	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1434887_23	UniRef90_UPI0006C03F37	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-1434887_23	862517.HMPREF9225_1657	100.0	4e-26	N/A	N/A
Pfam	UHGV-1434887_23	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1434887_23	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_26	phrog_36	50.6	0.00000000000004	transcriptional regulator	transcription regulation
COG	UHGV-1434887_26	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1434887_26	PF08281,MF_00674,NF007227,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-1434887_27	K03497	59.9	5.6e-17	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1434887_27	phrog_940	322.3	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1434887_27	UniRef90_UPI001C389DC7	667.0	0	N/A	N/A
eggNOG-mapper	UHGV-1434887_27	1232449.BAHV02000018_gene1534	265.0	0	N/A	N/A
PADLOC	UHGV-1434887_27	MTase_II_00015	90.1	3.3e-26	Type II methyltransferase	RM
Pfam	UHGV-1434887_27	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1434887_27	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1434887_27	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1434887_27	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1434887_28	PF15887,COG4307	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_30	phrog_2412	85.0	8e-25	N/A	unknown function
UniRef90	UHGV-1434887_30	UniRef90_UPI001C38E948	225.0	0	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-1434887_30	1125712.HMPREF1316_1524	64.3	0.0000000000178	N/A	N/A
Pfam	UHGV-1434887_30	PF10685	N/A	N/A	Stress-induced bacterial acidophilic repeat motif	KGG
structural_annotation	UHGV-1434887_30	PF18932	N/A	N/A	N/A	N/A
KOfam	UHGV-1434887_31	K06909	363.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1434887_31	phrog_3717	168.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1434887_31	UniRef90_A0A6N9L4W9	796.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1434887_31	445974.CLORAM_02936	736.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1434887_31	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1434887_31	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1434887_31	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1434887_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1434887_31	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_32	phrog_64	393.0	0	portal protein	head and packaging
UniRef90	UHGV-1434887_32	UniRef90_A0A6N9L3D6	899.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1434887_32	445974.CLORAM_02935	480.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1434887_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1434887_32	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1434887_32	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_33	phrog_115	337.5	0	minor head protein	head and packaging
UniRef90	UHGV-1434887_33	UniRef90_A0A6N9L4X5	987.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1434887_33	1211844.CBLM010000016_gene1495	401.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1434887_33	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1434887_33	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1434887_33	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1434887_33	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_35	phrog_3675	114.3	4.6e-34	N/A	unknown function
UniRef90	UHGV-1434887_35	UniRef90_A0A0E4H649	119.0	1.79e-32	YjcQ protein	N/A
eggNOG-mapper	UHGV-1434887_35	1120978.KB894082_gene1061	139.0	1.76998e-41	YjcQ protein	N/A
Pfam	UHGV-1434887_35	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1434887_35	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_36	phrog_30609	66.3	5.1e-19	N/A	unknown function
structural_annotation	UHGV-1434887_36	PF21485	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_37	phrog_172	157.5	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1434887_37	UniRef90_A0A6N9L4V5	273.0	0	N/A	N/A
eggNOG-mapper	UHGV-1434887_37	445974.CLORAM_02931	129.0	4.9e-35	N/A	N/A
Pfam	UHGV-1434887_37	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1434887_37	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_38	phrog_422	298.9	0	major head protein	head and packaging
UniRef90	UHGV-1434887_38	UniRef90_A0A2H4JCM6	302.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-1434887_38	1211844.CBLM010000016_gene1491	307.0	0	N/A	N/A
structural_annotation	UHGV-1434887_38	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_39	phrog_2724	54.8	0.0000000000000019	N/A	unknown function
UniRef90	UHGV-1434887_39	UniRef90_A0A6N9L4P9	155.0	0	Rho_N domain-containing protein	N/A
Pfam	UHGV-1434887_39	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-1434887_39	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-1434887_39	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_40	phrog_132	45.4	0.0000000000012	head-tail adaptor	connector
UniRef90	UHGV-1434887_40	UniRef90_A0A1G5CLS7	53.5	0.000000635	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-1434887_40	1235800.C819_00483	57.8	0.00000000289	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1434887_40	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1434887_40	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_41	phrog_2168	93.6	1.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-1434887_41	1280689.AUJC01000003_gene969	79.0	1.25e-17	N/A	N/A
structural_annotation	UHGV-1434887_41	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_42	phrog_5	60.5	4.1e-17	tail completion or Neck1 protein	connector
UniRef90	UHGV-1434887_42	UniRef90_A0A6N9L3B6	314.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1434887_42	562981.HMPREF0428_01816	106.0	7.5e-27	N/A	N/A
NCBIFam	UHGV-1434887_42	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1434887_42	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_43	phrog_78	56.2	6.8e-16	tail terminator	connector
eggNOG-mapper	UHGV-1434887_43	1504823.CCMM01000008_gene1036	141.0	4.31039e-42	N/A	N/A
structural_annotation	UHGV-1434887_43	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_44	phrog_158	69.7	5.9e-20	major tail protein	tail
UniRef90	UHGV-1434887_44	UniRef90_A0A6N9L2K6	266.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1434887_44	742733.HMPREF9469_01817	175.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1434887_44	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1434887_44	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_45	phrog_183	59.2	7.4e-17	tail chaperone protein	tail
UniRef90	UHGV-1434887_45	UniRef90_UPI0011C9B36A	223.0	0	N/A	N/A
eggNOG-mapper	UHGV-1434887_45	445974.CLORAM_02923	119.0	4.04e-33	N/A	N/A
Pfam	UHGV-1434887_45	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1434887_45	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_46	phrog_35723	241.2	0	N/A	unknown function
UniRef90	UHGV-1434887_46	UniRef90_A0A6N9L4U2	1509.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1434887_46	650150.ERH_0621	340.0	0	tape measure	N/A
Pfam	UHGV-1434887_46	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1434887_46	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1434887_46	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1434887_47	phrog_1194	86.2	3.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1434887_47	1504823.CCMM01000008_gene1031	188.0	0	N/A	N/A
Pfam	UHGV-1434887_47	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1434887_47	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_48	phrog_15074	60.0	1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1434887_48	445974.CLORAM_02919	490.0	0	cellulase activity	N/A
COG	UHGV-1434887_48	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1434887_48	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1434887_49	phrog_30133	115.9	3.4e-34	virion structural protein	head and packaging
UniRef90	UHGV-1434887_49	UniRef90_I7ARM6	298.0	0	N/A	N/A
eggNOG-mapper	UHGV-1434887_49	1504823.CCMM01000008_gene1029	319.0	0	N/A	N/A
structural_annotation	UHGV-1434887_49	PF14874,NF038186	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1434887_50	445975.COLSTE_02153	54.3	0.000000167	Prophage endopeptidase tail	N/A
COG	UHGV-1434887_50	COG4926	N/A	N/A	Phage-related protein	N/A