UHGV-1436142 (vOTU-035007)

Viral Genome: UHGV-1436142

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1436142
vOTU ID	vOTU-035007
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0319157
Associated BioSample	SAMEA2581919
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	88.92 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	27
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9746
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.51
Jumbo phage	No

Genome content
Genome length (bp)	53,760
GC content	47.91%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	88
CDS density	92%
Average CDS length (bps)	559.02
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 88.92)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1436142_1	phrog_4210	1376.6	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436142_1	UniRef90_A0A3C2CH81	1125.0	0	N/A	N/A
eggNOG-mapper	UHGV-1436142_1	428125.CLOLEP_01375	1021.0	0	DNA polymerase type-B family	N/A
Pfam	UHGV-1436142_1	PF19263	N/A	N/A	N/A	DUF5906
structural_annotation	UHGV-1436142_1	PF00519,PF09250,MF_00016,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_5	phrog_4678	144.0	5.395e-43	N/A	unknown function
UniRef90	UHGV-1436142_5	UniRef90_D4P7T9	112.0	2.81e-28	Gp071	N/A
eggNOG-mapper	UHGV-1436142_5	742740.HMPREF9474_02306	105.0	3.31e-26	N/A	N/A
PHROG	UHGV-1436142_7	phrog_2152	289.1	0	N/A	unknown function
UniRef90	UHGV-1436142_7	UniRef90_UPI00156DA7B3	245.0	0	N/A	N/A
eggNOG-mapper	UHGV-1436142_7	478749.BRYFOR_08565	243.0	0	N/A	N/A
Pfam	UHGV-1436142_7	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-1436142_7	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_11	phrog_4079	169.4	0	N/A	unknown function
UniRef90	UHGV-1436142_11	UniRef90_D4P7H8	104.0	4.04e-24	Gp067	N/A
eggNOG-mapper	UHGV-1436142_11	691965.D4P7H8_9CAUD	104.0	6.77e-25	N/A	N/A
PHROG	UHGV-1436142_28	phrog_2152	236.4	0	N/A	unknown function
UniRef90	UHGV-1436142_28	UniRef90_UPI0011CA98EE	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-1436142_28	742740.HMPREF9474_02314	212.0	0	N/A	N/A
Pfam	UHGV-1436142_28	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-1436142_28	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_31	phrog_6721	241.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1436142_31	411473.RUMCAL_00916	228.0	0	N/A	N/A
structural_annotation	UHGV-1436142_31	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
Pfam	UHGV-1436142_47	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-1436142_47	PF10743,TIGR01764,COG3311	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1436142_48	311424.DhcVS_252	94.4	7.71e-24	N/A	N/A
KOfam	UHGV-1436142_51	K14059	185.3	0	int; integrase	N/A
PHROG	UHGV-1436142_51	phrog_1	180.3	0	integrase	integration and excision
UniRef90	UHGV-1436142_51	UniRef90_A0A1Y3SS19	149.0	2.4e-38	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1436142_51	1121335.Clst_0367	135.0	7.35e-34	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1436142_51	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-1436142_51	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1436142_51	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1436142_51	PF00589,PF02920,MF_01808,TIGR02224,COG4974,COG3422	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1436142_52	397290.C810_01336	63.2	0.0000000000301	N/A	N/A
PHROG	UHGV-1436142_54	phrog_20016	52.6	0.0000000000000063	N/A	unknown function
structural_annotation	UHGV-1436142_54	PF00386,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_55	phrog_16490	84.9	3e-26	N/A	unknown function
eggNOG-mapper	UHGV-1436142_55	397290.C810_01328	107.0	5.64e-25	N/A	N/A
eggNOG-mapper	UHGV-1436142_57	658655.HMPREF0988_00919	52.8	0.00000174	N/A	N/A
PHROG	UHGV-1436142_59	phrog_4105	104.7	5e-31	N/A	unknown function
UniRef90	UHGV-1436142_59	UniRef90_A0A8D9UHA9	129.0	3.96e-37	Holin protein	N/A
eggNOG-mapper	UHGV-1436142_59	411460.RUMTOR_01326	155.0	0	N/A	N/A
PHROG	UHGV-1436142_60	phrog_2649	67.1	2.7e-19	endolysin	lysis
UniRef90	UHGV-1436142_60	UniRef90_A0A1V5Q5W6	331.0	0	Putative peptidoglycan binding domain protein	N/A
eggNOG-mapper	UHGV-1436142_60	476272.RUMHYD_01851	75.5	0.00000000000183	Putative peptidoglycan binding domain	N/A
Pfam	UHGV-1436142_60	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-1436142_60	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1436142_60	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1436142_60	PF18342,PF01471,PF00877,NF038080,COG4991,COG3409,COG0791	N/A	N/A	N/A	N/A
Pfam	UHGV-1436142_61	PF09458	N/A	N/A	H-type lectin domain	H_lectin
structural_annotation	UHGV-1436142_61	PF09458,NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_62	phrog_28526	109.7	9.6e-33	N/A	unknown function
UniRef90	UHGV-1436142_62	UniRef90_A0A415D4T1	82.4	8.52e-20	N/A	N/A
eggNOG-mapper	UHGV-1436142_62	411462.DORLON_00769	84.0	3.5e-21	N/A	N/A
Pfam	UHGV-1436142_62	PF04255	N/A	N/A	N/A	DUF433
eggNOG-mapper	UHGV-1436142_65	877414.ATWA01000062_gene1616	74.7	0.00000000000683	N/A	N/A
structural_annotation	UHGV-1436142_65	PF10651,NF033814	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_66	phrog_13289	171.6	0	tail protein	tail
eggNOG-mapper	UHGV-1436142_66	195103.CPF_1574	145.0	3.31e-32	Prophage endopeptidase tail	N/A
Pfam	UHGV-1436142_66	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1436142_66	PF02018	N/A	N/A	Carbohydrate binding domain	CBM_4_9
NCBIFam	UHGV-1436142_66	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1436142_66	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1436142_66	PF14594,PF03422,PF00629,PF13157,PF03211,TIGR01665,NF040827,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_67	phrog_33	68.1	2.1e-19	distal tail protein Dit	tail
UniRef90	UHGV-1436142_67	UniRef90_A0A1W1Z4I2	219.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1436142_67	1262449.CP6013_2095	136.0	1.64e-36	tail component	N/A
COG	UHGV-1436142_67	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1436142_67	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_68	phrog_750	58.5	1e-16	N/A	unknown function
structural_annotation	UHGV-1436142_68	PF13835,NF040858	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436142_71	PF06865,MF_01537,COG3123	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_72	phrog_4372	413.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1436142_72	UniRef90_UPI0018A04E48	294.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-1436142_72	665956.HMPREF1032_00686	286.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1436142_72	PF20155	N/A	N/A	Tape measure protein	TMP_3
Pfam	UHGV-1436142_72	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
NCBIFam	UHGV-1436142_72	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1436142_72	COG5412	N/A	N/A	Phage-related protein	N/A
UniRef90	UHGV-1436142_73	UniRef90_A0A7X5IVV8	154.0	1.4013e-45	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1436142_73	478749.BRYFOR_08514	142.0	6.76967e-42	N/A	N/A
Pfam	UHGV-1436142_73	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1436142_73	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_74	phrog_4338	253.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1436142_74	742733.HMPREF9469_05023	197.0	0	N/A	N/A
PHROG	UHGV-1436142_75	phrog_4282	142.1	2.7003e-42	N/A	unknown function
eggNOG-mapper	UHGV-1436142_75	742733.HMPREF9469_05024	93.2	1.91e-22	N/A	N/A
PHROG	UHGV-1436142_76	phrog_2645	323.1	0	major tail protein	tail
UniRef90	UHGV-1436142_76	UniRef90_A0A2U8UI58	260.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-1436142_76	742740.HMPREF9474_02267	231.0	0	N/A	N/A
Pfam	UHGV-1436142_76	PF06488	N/A	N/A	Phage tail tube protein	L_lac_phage_MSP
structural_annotation	UHGV-1436142_76	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436142_77	UniRef90_A0A5J6D7U9	112.0	4.72e-30	Tail terminator	N/A
eggNOG-mapper	UHGV-1436142_77	691965.D4P7D8_9CAUD	98.6	1.44e-25	N/A	N/A
structural_annotation	UHGV-1436142_77	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_78	phrog_4270	154.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1436142_78	665956.HMPREF1032_00677	142.0	1.47977e-42	N/A	N/A
structural_annotation	UHGV-1436142_78	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
KOfam	UHGV-1436142_80	K06904	64.5	1e-18	N/A	N/A
PHROG	UHGV-1436142_80	phrog_3270	764.8	0	head maturation protease	head and packaging
UniRef90	UHGV-1436142_80	UniRef90_A0A1Y4MXD5	726.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1436142_80	691965.D4P7D6_9CAUD	513.0	0	peptidase activity	N/A
Pfam	UHGV-1436142_80	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
Pfam	UHGV-1436142_80	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-1436142_80	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_81	phrog_12	116.2	2.2e-34	portal protein	head and packaging
UniRef90	UHGV-1436142_81	UniRef90_A0A1Y4MMD6	508.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1436142_81	411460.RUMTOR_01348	493.0	0	Phage portal protein	N/A
Pfam	UHGV-1436142_81	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-1436142_81	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_83	phrog_19468	81.7	9.3e-24	N/A	unknown function
UniRef90	UHGV-1436142_83	UniRef90_UPI001379BA63	119.0	2.14e-31	polymorphic toxin type 50 domain-containing protein	N/A
eggNOG-mapper	UHGV-1436142_83	1298920.KI911353_gene4854	77.8	0.0000000000000117	Phage minor capsid protein 2	N/A
Pfam	UHGV-1436142_83	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-1436142_83	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436142_83	PF15542	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_84	phrog_9	251.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1436142_84	UniRef90_A0A7X5ECI8	889.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1436142_84	428125.CLOLEP_01409	895.0	0	Phage Terminase	N/A
Pfam	UHGV-1436142_84	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1436142_84	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1436142_84	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1436142_84	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1436142_85	phrog_32444	64.1	5e-21	N/A	unknown function
eggNOG-mapper	UHGV-1436142_85	428125.CLOLEP_01408	75.5	0.0000000000000115	N/A	N/A
PHROG	UHGV-1436142_86	phrog_4247	125.8	1.4e-37	virion structural protein	head and packaging
UniRef90	UHGV-1436142_86	UniRef90_D4P7N2	97.1	7.99e-24	Gp014	N/A
eggNOG-mapper	UHGV-1436142_86	478749.BRYFOR_08528	100.0	8.2e-26	N/A	N/A
PHROG	UHGV-1436142_87	phrog_4321	193.4	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436142_87	UniRef90_A0A6M3SV30	168.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1436142_87	478749.BRYFOR_08530	174.0	0	N/A	N/A
PHROG	UHGV-1436142_88	phrog_4259	126.0	9.5e-38	N/A	unknown function
UniRef90	UHGV-1436142_88	UniRef90_D4P7B9	96.3	5.2e-23	Gp008	N/A
eggNOG-mapper	UHGV-1436142_88	691965.D4P7B9_9CAUD	96.3	8.72e-24	N/A	N/A