UHGV-1436557 (vOTU-018984)

Viral Genome: UHGV-1436557

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1436557
vOTU ID	vOTU-018984
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0254838
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	87.3 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9747
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	37.47
Jumbo phage	No

Genome content
Genome length (bp)	37,560
GC content	38.63%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	92%
Average CDS length (bps)	628.86
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 87.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1436557_1	phrog_6616	127.9	3.6e-38	tail protein	tail
eggNOG-mapper	UHGV-1436557_1	1121333.JMLH01000047_gene1007	386.0	0	N/A	N/A
PHROG	UHGV-1436557_2	phrog_1194	91.3	6.2e-27	N/A	unknown function
UniRef90	UHGV-1436557_2	UniRef90_G0IA27	82.0	8.68e-18	N/A	N/A
eggNOG-mapper	UHGV-1436557_2	1294142.CINTURNW_1701	103.0	6.93e-27	N/A	N/A
Pfam	UHGV-1436557_2	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1436557_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_3	phrog_1535	243.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1436557_3	UniRef90_A8RD17	233.0	0	Cation diffusion facilitator family transporter	N/A
eggNOG-mapper	UHGV-1436557_3	428127.EUBDOL_01563	233.0	0	homoserine transmembrane transporter activity	N/A
COG	UHGV-1436557_3	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
eggNOG-mapper	UHGV-1436557_4	1121333.JMLH01000047_gene1011	100.0	1.31e-25	N/A	N/A
Pfam	UHGV-1436557_5	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1436557_5	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_6	phrog_158	40.3	0.000000000037	major tail protein	tail
eggNOG-mapper	UHGV-1436557_6	469596.HMPREF9488_01310	226.0	0	N/A	N/A
structural_annotation	UHGV-1436557_6	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1436557_7	1121333.JMLH01000047_gene1014	66.2	0.00000000000558	N/A	N/A
structural_annotation	UHGV-1436557_7	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436557_8	UniRef90_UPI001BBD4500	118.0	6.75e-31	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1436557_8	397290.C810_01411	71.2	0.000000000000329	N/A	N/A
structural_annotation	UHGV-1436557_8	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1436557_9	1232453.BAIF02000058_gene1630	62.0	0.000000000117	N/A	N/A
UniRef90	UHGV-1436557_10	UniRef90_A0A7C7ERG0	107.0	4.47e-28	DNA-packaging protein	N/A
structural_annotation	UHGV-1436557_10	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1436557_12	428127.EUBDOL_01555	275.0	0	N/A	N/A
structural_annotation	UHGV-1436557_12	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_14	phrog_64	192.9	0	portal protein	head and packaging
UniRef90	UHGV-1436557_14	UniRef90_A0A3E3AE79	427.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1436557_14	1232453.BAIF02000058_gene1625	248.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1436557_14	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1436557_14	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436557_15	COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_16	phrog_38	212.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1436557_16	UniRef90_A0A318EQM2	460.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-1436557_16	1123263.AUKY01000015_gene1608	502.0	0	chromosome segregation	N/A
NCBIFam	UHGV-1436557_16	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1436557_16	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436557_16	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
KOfam	UHGV-1436557_17	K14060	119.2	3.5e-35	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1436557_17	phrog_125	149.0	2.10195e-44	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436557_17	UniRef90_A0A3E3AEZ4	209.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1436557_17	641107.CDLVIII_2031	160.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1436557_17	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1436557_17	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1436557_17	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436557_18	UniRef90_UPI0018AB0909	50.1	0.00000424	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-1436557_18	PF12844,TIGR02612,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_19	phrog_16683	115.0	4.4e-34	N/A	unknown function
UniRef90	UHGV-1436557_19	UniRef90_A0A1C5VLT5	126.0	7.63e-29	Putative amidoligase enzyme	N/A
eggNOG-mapper	UHGV-1436557_19	1203606.HMPREF1526_01758	116.0	7.11e-26	Putative amidoligase enzyme	N/A
Pfam	UHGV-1436557_19	PF12224	N/A	N/A	Putative amidoligase enzyme	Amidoligase_2
structural_annotation	UHGV-1436557_19	PF12224,MF_02111,NF010044,COG2170	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436557_20	UniRef90_A0A1C6GC44	156.0	2.19023e-42	Glutamine amidotransferases class-II	N/A
eggNOG-mapper	UHGV-1436557_20	1401067.HMPREF0872_03875	117.0	1.52e-28	N/A	N/A
structural_annotation	UHGV-1436557_20	MF_01931,TIGR01134,COG0034	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_21	phrog_606	42.0	0.00000000001	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-1436557_21	931276.Cspa_c57180	51.2	0.00000571	DNA-packaging protein gp3	N/A
Pfam	UHGV-1436557_21	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-1436557_22	K02316	85.1	7.2e-25	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1436557_22	phrog_864	209.9	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436557_22	UniRef90_UPI001C2539AF	518.0	0	N/A	N/A
eggNOG-mapper	UHGV-1436557_22	1219626.HMPREF1639_07360	108.0	1.22e-21	D5 N terminal like	N/A
Pfam	UHGV-1436557_22	PF13155	N/A	N/A	Toprim-like	Toprim_2
Pfam	UHGV-1436557_22	PF19263	N/A	N/A	N/A	DUF5906
NCBIFam	UHGV-1436557_22	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1436557_22	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1436557_22	PF04735,MF_00974,MF_04000,NF005477,COG3378,COG0358	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436557_24	PF15959	N/A	N/A	N/A	N/A
KOfam	UHGV-1436557_29	K00558	53.3	0.0000000000000023	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1436557_29	phrog_16427	122.0	3.1e-36	DNA methyltransferase	other
UniRef90	UHGV-1436557_29	UniRef90_A0A373VYY6	150.0	1.37327e-43	DNA (cytosine-5-)-methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-1436557_29	482234.SCAZ3_10455	151.0	1.43997e-41	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1436557_29	oMTase_00023	73.0	1.1e-23	orphan methyltransferase	RM
Pfam	UHGV-1436557_29	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1436557_29	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
eggNOG-mapper	UHGV-1436557_31	1151292.QEW_4451	61.2	0.00000000426	N/A	N/A
COG	UHGV-1436557_31	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-1436557_32	K00558	138.8	2.4e-41	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1436557_32	phrog_116	142.9	1.10002e-42	DNA methyltransferase	other
UniRef90	UHGV-1436557_32	UniRef90_UPI000408AAB9	206.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1436557_32	1122173.AXVL01000060_gene390	206.0	0	PFAM C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1436557_32	MTase_II_00058	146.2	3.89561e-43	Type II methyltransferase	RM
Pfam	UHGV-1436557_32	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1436557_32	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1436557_32	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1436557_32	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1436557_33	K07171	83.2	3.8e-24	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-1436557_33	phrog_1936	124.1	7.3e-37	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1436557_33	UniRef90_A0A1C5MWG4	140.0	1.5e-39	mRNA interferase MazF4	N/A
eggNOG-mapper	UHGV-1436557_33	411461.DORFOR_01157	112.0	1.42e-28	N/A	N/A
Pfam	UHGV-1436557_33	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-1436557_33	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-1436557_33	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_37	phrog_22292	83.3	1.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-1436557_37	1232446.BAIE02000002_gene811	63.2	0.000000000224	N/A	N/A
PHROG	UHGV-1436557_38	phrog_22292	40.1	0.00000000004	N/A	unknown function
eggNOG-mapper	UHGV-1436557_38	1232446.BAIE02000002_gene811	49.7	0.00000525	N/A	N/A
structural_annotation	UHGV-1436557_39	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_40	phrog_3878	55.5	8.4e-16	N/A	unknown function
PHROG	UHGV-1436557_41	phrog_4019	114.5	3.3e-34	N/A	unknown function
UniRef90	UHGV-1436557_41	UniRef90_F9PY75	90.9	2.26e-21	Conserved domain protein	N/A
PHROG	UHGV-1436557_42	phrog_4856	70.2	2.6e-20	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1436557_42	UniRef90_E2NR83	169.0	0	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-1436557_42	1680.BADO_1259	50.8	0.00000107	N/A	N/A
Pfam	UHGV-1436557_42	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
structural_annotation	UHGV-1436557_42	MF_01019,NF002747,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_43	phrog_6721	278.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1436557_43	428125.CLOLEP_01387	253.0	0	N/A	N/A
structural_annotation	UHGV-1436557_43	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_45	phrog_236	97.9	1.4e-28	nucleotide kinase	other
UniRef90	UHGV-1436557_45	UniRef90_A0A8D9PGN7	129.0	4.02e-37	Nucelotide kinase	N/A
eggNOG-mapper	UHGV-1436557_45	1123263.AUKY01000015_gene1590	89.7	1.2e-22	N/A	N/A
Pfam	UHGV-1436557_45	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1436557_45	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_46	phrog_93	44.6	0.0000000000013	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436557_46	UniRef90_A0A3E3AEG4	92.8	3.2e-22	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1436557_46	1385385.U6E9B1_9CAUD	55.8	0.0000000154	hydrolase activity, acting on ester bonds	N/A
Pfam	UHGV-1436557_46	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
KOfam	UHGV-1436557_47	K19789	255.6	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-1436557_47	phrog_16	219.8	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436557_47	UniRef90_A0A374HMN2	327.0	0	ATP-dependent helicase	N/A
eggNOG-mapper	UHGV-1436557_47	1410670.JHXF01000015_gene2270	300.0	0	helicase	N/A
PADLOC	UHGV-1436557_47	mREase_IV_00005	101.5	7.5e-30	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1436557_47	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1436557_47	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1436557_47	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1436557_47	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1436557_48	1539298.JO41_12690	58.2	0.0000000317	N/A	N/A
Pfam	UHGV-1436557_48	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-1436557_48	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_49	phrog_124	138.0	4.99997e-41	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436557_49	UniRef90_A0A7X2IW81	200.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1436557_49	1227360.C176_12573	195.0	0	AAA domain	N/A
Pfam	UHGV-1436557_49	PF13479	N/A	N/A	AAA domain	AAA_24
NCBIFam	UHGV-1436557_49	TIGR01618.1	N/A	N/A	phage nucleotide-binding protein	N/A
structural_annotation	UHGV-1436557_49	PF13479,MF_00350,TIGR01618,COG1066	N/A	N/A	N/A	N/A
PHROG	UHGV-1436557_50	phrog_69	50.8	0.000000000000024	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436557_50	UniRef90_A0A645E2H1	178.0	0	PDDEXK_1 domain-containing protein	N/A
Pfam	UHGV-1436557_50	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
COG	UHGV-1436557_50	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-1436557_50	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436557_51	UniRef90_A0A417IKZ6	90.9	3.17e-22	DNA-binding protein	N/A
structural_annotation	UHGV-1436557_51	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436557_53	UniRef90_A0A3C1N2P3	66.2	0.00000000000259	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1436557_53	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
KOfam	UHGV-1436557_54	K14059	105.0	9.5e-31	int; integrase	N/A
PHROG	UHGV-1436557_54	phrog_1	131.3	7.2e-39	integrase	integration and excision
UniRef90	UHGV-1436557_54	UniRef90_A0A1H6WU47	529.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1436557_54	1504823.CCMM01000008_gene1083	433.0	0	DNA integration	N/A
Pfam	UHGV-1436557_54	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-1436557_54	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1436557_54	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1436557_54	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A