UHGV-1436810 (vOTU-063369)

Viral Genome: UHGV-1436810

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1436810
vOTU ID	vOTU-063369
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0260412
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.11 (High-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9775
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.51
Jumbo phage	No

Genome content
Genome length (bp)	38,522
GC content	51.39%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	93%
Average CDS length (bps)	651.71
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.11)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1436810_1	phrog_27197	117.8	6e-36	N/A	unknown function
COG	UHGV-1436810_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1436810_1	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_3	phrog_659	203.8	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436810_3	UniRef90_UPI001E5A6693	335.0	0	N/A	N/A
eggNOG-mapper	UHGV-1436810_3	1507.HMPREF0262_00431	220.0	0	N/A	N/A
Pfam	UHGV-1436810_3	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1436810_3	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_4	phrog_72	54.7	0.0000000000000011	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436810_4	UniRef90_A0A8D9PDS2	169.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1436810_4	445972.ANACOL_01825	139.0	2.64e-39	N/A	N/A
structural_annotation	UHGV-1436810_4	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_5	phrog_7566	54.8	0.0000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1436810_5	693746.OBV_24070	70.5	0.0000000000000341	N/A	N/A
KOfam	UHGV-1436810_6	K03111	130.0	2.7e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1436810_6	phrog_44	135.3	4.00001e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436810_6	UniRef90_UPI001E2A5A6F	227.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1436810_6	445972.ANACOL_01827	126.0	1.07e-35	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1436810_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1436810_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1436810_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1436810_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1436810_6	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_8	phrog_9474	94.1	1.7e-27	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436810_8	UniRef90_A0A417QFV0	124.0	6.05e-31	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1436810_8	203119.Cthe_2466	127.0	4.58e-32	N/A	N/A
structural_annotation	UHGV-1436810_8	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_9	phrog_9804	175.7	0	N/A	unknown function
UniRef90	UHGV-1436810_9	UniRef90_UPI001E312ACC	302.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-1436810_9	1121344.JHZO01000003_gene981	182.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1436810_9	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1436810_9	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-1436810_10	K01160	69.2	1e-19	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1436810_10	phrog_34	72.3	7.7e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436810_10	UniRef90_UPI00131A3D1F	148.0	5.88545e-44	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1436810_10	477974.Daud_0813	52.0	0.00000188	N/A	N/A
Pfam	UHGV-1436810_10	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-1436810_10	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_11	phrog_1271	40.8	0.000000000038	HNH endonuclease	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1436810_11	TIGR04381	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_15	phrog_3777	81.1	8.1e-24	N/A	unknown function
UniRef90	UHGV-1436810_15	UniRef90_A0A417F883	142.0	4.74003e-41	N/A	N/A
eggNOG-mapper	UHGV-1436810_15	411462.DORLON_00813	68.9	0.000000000000274	N/A	N/A
Pfam	UHGV-1436810_15	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-1436810_15	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_20	phrog_36	43.9	0.0000000000037	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1436810_20	428125.CLOLEP_01806	75.9	0.00000000000000226	N/A	N/A
Pfam	UHGV-1436810_20	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1436810_20	PF07374,TIGR01636	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436810_21	NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_24	phrog_7339	102.6	3.2e-30	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1436810_24	UniRef90_A0A2V2GLL9	438.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1436810_24	1150474.JQJI01000006_gene784	91.3	5.07e-19	metallophosphoesterase	N/A
Pfam	UHGV-1436810_24	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1436810_24	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-1436810_24	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436810_25	UniRef90_A0A8D9UHF6	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-1436810_25	272630.MexAM1_META1p3985	57.4	0.00000000231	N/A	N/A
KOfam	UHGV-1436810_26	K06909	137.7	9.99995e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1436810_26	phrog_979	160.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1436810_26	UniRef90_A0A8D9UH35	919.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-1436810_26	1232449.BAHV02000016_gene1824	478.0	0	N/A	N/A
Pfam	UHGV-1436810_26	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1436810_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1436810_26	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_28	phrog_156	172.5	0	portal protein	head and packaging
UniRef90	UHGV-1436810_28	UniRef90_A0A8D9UHD1	1112.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1436810_28	1121091.AUMP01000003_gene2583	363.0	0	N/A	N/A
structural_annotation	UHGV-1436810_28	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436810_29	UniRef90_A0A8D9UHD6	128.0	5.95e-38	Ogr/Delta-like zinc finger	N/A
structural_annotation	UHGV-1436810_29	PF20020	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436810_30	UniRef90_A0A8D9UHB9	406.0	0	Non-structural protein 5	N/A
PHROG	UHGV-1436810_31	phrog_1357	241.3	0	major head protein	head and packaging
UniRef90	UHGV-1436810_31	UniRef90_A0A8D9UHB3	597.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1436810_31	696281.Desru_1092	289.0	0	N/A	N/A
NCBIFam	UHGV-1436810_31	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1436810_31	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_32	phrog_15239	41.9	0.000000000013	N/A	unknown function
PHROG	UHGV-1436810_34	phrog_3287	127.4	6.9e-38	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1436810_34	665956.HMPREF1032_03917	476.0	0	N/A	N/A
structural_annotation	UHGV-1436810_34	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
KOfam	UHGV-1436810_35	K19719	92.9	4.1e-28	COL2A; collagen type II alpha	N/A
PHROG	UHGV-1436810_35	phrog_819	184.5	0	tail protein	tail
UniRef90	UHGV-1436810_35	UniRef90_A0A8D9PE13	589.0	0	Virion structural protein	N/A
eggNOG-mapper	UHGV-1436810_35	33035.JPJF01000033_gene2261	57.8	0.0000084	tail collar domain protein	N/A
Pfam	UHGV-1436810_35	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1436810_35	COG4675	N/A	N/A	Phage tail collar domain	N/A
UniRef90	UHGV-1436810_36	UniRef90_A0A8D9PE18	133.0	1.41e-36	mRNA splicing protein	N/A
Pfam	UHGV-1436810_36	PF07646	N/A	N/A	Kelch motif	Kelch_2
Pfam	UHGV-1436810_37	PF13964	N/A	N/A	Kelch motif	Kelch_6
structural_annotation	UHGV-1436810_37	PF16472,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_39	phrog_2310	56.2	3.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-1436810_39	1415774.U728_3409	53.1	0.00000000664	N/A	N/A
PHROG	UHGV-1436810_40	phrog_1863	64.9	7.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-1436810_40	718252.FP2_04900	78.2	5.88e-18	N/A	N/A
KOfam	UHGV-1436810_42	K01447	82.8	5.7e-24	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1436810_42	phrog_15001	205.8	0	endolysin	lysis
UniRef90	UHGV-1436810_42	UniRef90_A0A8D9UHF0	501.0	0	PGRP protein	N/A
eggNOG-mapper	UHGV-1436810_42	411483.FAEPRAA2165_03397	204.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1436810_42	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1436810_42	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1436810_42	PF01510,NF008758,COG5632	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436810_43	MF_01304	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_44	phrog_14770	107.3	2.8e-32	N/A	unknown function
UniRef90	UHGV-1436810_44	UniRef90_A0A8D9UHE1	1855.0	0	PolyVal ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-1436810_44	445971.ANASTE_00728	286.0	0	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair	N/A
Pfam	UHGV-1436810_44	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-1436810_44	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-1436810_44	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
KOfam	UHGV-1436810_45	K14059	204.7	0	int; integrase	N/A
PHROG	UHGV-1436810_45	phrog_1	180.1	0	integrase	integration and excision
UniRef90	UHGV-1436810_45	UniRef90_A0A8D9PE11	344.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1436810_45	693746.OBV_01970	153.0	3.45e-40	Phage integrase family	N/A
Pfam	UHGV-1436810_45	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1436810_45	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1436810_45	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_47	phrog_26910	66.7	2.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-1436810_47	476272.RUMHYD_01979	60.1	0.0000000383	N/A	N/A
UniRef90	UHGV-1436810_48	UniRef90_UPI001E2EC555	201.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1436810_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1436810_48	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-1436810_48	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1436810_49	UniRef90_UPI001E54DE4F	127.0	8.29e-37	helix-turn-helix domain-containing protein	N/A
UniRef90	UHGV-1436810_50	UniRef90_UPI0018995761	87.8	1.41e-21	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-1436810_50	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1436810_52	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1436810_55	phrog_4433	184.5	0	N/A	unknown function
UniRef90	UHGV-1436810_55	UniRef90_A0A3S4IYA1	106.0	1.48e-25	Gp53	N/A
eggNOG-mapper	UHGV-1436810_55	767434.Fraau_1460	119.0	9.21e-31	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1436810_55	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1436810_55	PF12120,NF000066	N/A	N/A	N/A	N/A