UHGV-1438470 (vOTU-124915)

Viral Genome: UHGV-1438470

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1438470
vOTU ID	vOTU-124915
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0147191
Associated BioSample	SAMEA3646732
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	50.85 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	6
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9703
Virus hallmark genes (geNomad)	2
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	2.72
Jumbo phage	No

Genome content
Genome length (bp)	20,130
GC content	27.95%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	28
CDS density	89%
Average CDS length (bps)	639.96
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1438470_1	phrog_247	103.3	2.8e-30	major head protein	head and packaging
UniRef90	UHGV-1438470_1	UniRef90_A0A2M9Q7H4	149.0	7.56701e-44	Phage coat protein (Fragment)	N/A
eggNOG-mapper	UHGV-1438470_1	742740.HMPREF9474_02353	179.0	0	N/A	N/A
COG	UHGV-1438470_1	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
eggNOG-mapper	UHGV-1438470_2	445972.ANACOL_01847	48.9	0.00000515	N/A	N/A
structural_annotation	UHGV-1438470_2	PF05135,TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1438470_3	445972.ANACOL_01848	55.1	0.0000000422	N/A	N/A
structural_annotation	UHGV-1438470_3	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1438470_4	665956.HMPREF1032_03623	52.8	0.00000394	N/A	N/A
structural_annotation	UHGV-1438470_4	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1438470_5	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1438470_6	445972.ANACOL_01851	85.9	3.13e-19	N/A	N/A
structural_annotation	UHGV-1438470_6	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1438470_7	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-1438470_8	phrog_26308	75.8	5.6e-22	N/A	unknown function
UniRef90	UHGV-1438470_8	UniRef90_A0A1Q6JN93	111.0	9.36e-27	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1438470_8	1042156.CXIVA_15870	99.4	4.64e-22	sh3 domain protein	N/A
COG	UHGV-1438470_8	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1438470_8	PF11355,PF13828,MF_00791,TIGR02588,COG5633	N/A	N/A	N/A	N/A
UniRef90	UHGV-1438470_9	UniRef90_A0A8J8ME07	61.6	0.0000000000303	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1438470_9	1105031.HMPREF1141_3283	54.3	0.00000000389	N/A	N/A
structural_annotation	UHGV-1438470_9	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
PHROG	UHGV-1438470_12	phrog_7940	139.7	1.70006e-41	N/A	unknown function
UniRef90	UHGV-1438470_12	UniRef90_A0A7G6E7X2	211.0	0	Phage repressor protein	N/A
eggNOG-mapper	UHGV-1438470_12	1449126.JQKL01000006_gene832	211.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1438470_12	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-1438470_12	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1438470_12	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1438470_13	phrog_1535	125.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1438470_13	1232449.BAHV02000010_gene2723	87.0	0.0000000000000238	domain protein	N/A
COG	UHGV-1438470_13	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1438470_13	PF09486,NF038178,COG1382	N/A	N/A	N/A	N/A
PHROG	UHGV-1438470_14	phrog_1194	67.7	1.5e-19	N/A	unknown function
structural_annotation	UHGV-1438470_14	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1438470_15	phrog_13879	83.2	3e-26	N/A	unknown function
eggNOG-mapper	UHGV-1438470_15	1122919.KB905559_gene1344	73.6	0.0000000000745	N/A	N/A
structural_annotation	UHGV-1438470_15	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
UniRef90	UHGV-1438470_17	UniRef90_A0A3G1KS68	73.9	0.00000000000793	INTEIN_C_TER domain-containing protein	N/A
eggNOG-mapper	UHGV-1438470_17	509191.AEDB02000102_gene3725	75.9	0.00000000000137	RHS repeat-associated core domain	N/A
Pfam	UHGV-1438470_17	PF07591	N/A	N/A	Pretoxin HINT domain	PT-HINT
NCBIFam	UHGV-1438470_17	TIGR01445.1	N/A	N/A	intein N-terminal splicing region	N/A
COG	UHGV-1438470_17	COG1372	N/A	N/A	Intein/homing endonuclease	N/A
eggNOG-mapper	UHGV-1438470_18	1120998.AUFC01000030_gene2248	70.9	0.000000000845	N/A	N/A
PHROG	UHGV-1438470_19	phrog_2310	47.8	0.00000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1438470_19	1415774.U728_3409	48.9	0.000000586	N/A	N/A
structural_annotation	UHGV-1438470_21	PF16938	N/A	N/A	N/A	N/A
KOfam	UHGV-1438470_22	K08640	69.0	9.6e-21	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1438470_22	phrog_2649	73.4	1.9e-23	endolysin	lysis
UniRef90	UHGV-1438470_22	UniRef90_B1C9L9	146.0	1.63e-40	Putative peptidoglycan binding domain protein	N/A
eggNOG-mapper	UHGV-1438470_22	445971.ANASTE_02319	146.0	2.73001e-41	Peptidase M15	N/A
Pfam	UHGV-1438470_22	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-1438470_22	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1438470_22	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1438470_22	PF05951,PF01471,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-1438470_23	phrog_2329	63.2	3.4e-18	N/A	unknown function
PHROG	UHGV-1438470_24	phrog_1281	89.2	2.9e-26	N/A	unknown function
UniRef90	UHGV-1438470_24	UniRef90_UPI001D14EC7B	116.0	5.4e-30	N/A	N/A
eggNOG-mapper	UHGV-1438470_24	1423748.BALB01000008_gene923	88.6	9.86e-20	N/A	N/A
Pfam	UHGV-1438470_24	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-1438470_24	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1438470_24	PF13274,COG3600	N/A	N/A	N/A	N/A
Pfam	UHGV-1438470_26	PF09388	N/A	N/A	Spo0E like sporulation regulatory protein	SpoOE-like
structural_annotation	UHGV-1438470_26	PF02583,COG1937	N/A	N/A	N/A	N/A
KOfam	UHGV-1438470_27	K19449	63.8	2.9e-18	sinR; XRE family transcriptional regulator, master regulator for biofilm formation	N/A
PHROG	UHGV-1438470_27	phrog_8	50.5	0.000000000000044	transcriptional regulator	transcription regulation
UniRef90	UHGV-1438470_27	UniRef90_R5YVI1	139.0	7.37994e-41	HTH-type transcriptional regulator SinR	N/A
eggNOG-mapper	UHGV-1438470_27	1034347.CAHJ01000062_gene1015	61.6	0.000000000118	Cro/C1-type HTH DNA-binding domain	N/A
PADLOC	UHGV-1438470_27	retron_type_VI_hth_cluster2_1	50.6	0.000000000000049	N/A	Retron
Pfam	UHGV-1438470_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1438470_27	PF09388	N/A	N/A	Spo0E like sporulation regulatory protein	SpoOE-like
COG	UHGV-1438470_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1438470_27	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A