UHGV-1440952 (vOTU-154575)

Viral Genome: UHGV-1440952

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1440952
vOTU ID	vOTU-154575
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0145315
Associated BioSample	SAMEA2738125
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	58.01 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	21
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9812
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	39.17
Jumbo phage	No

Genome content
Genome length (bp)	19,905
GC content	41.01%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	26
CDS density	96%
Average CDS length (bps)	733.85
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 58.01)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1440952_1	phrog_11309	88.9	2.7e-26	N/A	unknown function
KOfam	UHGV-1440952_2	K02315	162.1	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1440952_2	phrog_50	157.8	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1440952_2	UniRef90_UPI000769982F	436.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1440952_2	1054460.SPPN_09070	433.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-1440952_2	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1440952_2	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1440952_2	PF01695,MF_00377,NF005931,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-1440952_3	K02086	77.1	1.9e-22	dnaD; DNA replication protein	N/A
PHROG	UHGV-1440952_3	phrog_186	156.2	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1440952_3	UniRef90_A0A2A2TWP2	407.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-1440952_3	1054460.SPPN_09075	262.0	0	N/A	N/A
Pfam	UHGV-1440952_3	PF06970	N/A	N/A	Replication initiator protein A (RepA) N-terminus	RepA_N
Pfam	UHGV-1440952_3	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-1440952_3	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-1440952_3	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1440952_3	PF06970,NF033789,COG3935	N/A	N/A	N/A	N/A
UniRef90	UHGV-1440952_4	UniRef90_UPI001897FFDE	100.0	1.13e-26	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1440952_4	1051631.F8HGP8_9CAUD	103.0	1.61e-28	N/A	N/A
structural_annotation	UHGV-1440952_4	PF05339,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1440952_5	UniRef90_UPI0018A99F5F	72.0	0.000000000000491	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1440952_5	413066.A1EAB9_9CAUD	76.6	0.00000000000000698	sequence-specific DNA binding	N/A
PHROG	UHGV-1440952_6	phrog_10680	60.6	8.9e-18	N/A	unknown function
UniRef90	UHGV-1440952_6	UniRef90_A0A2A2TVS9	262.0	0	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1440952_6	936580.HMPREF1516_0751	243.0	0	TM2 domain	N/A
Pfam	UHGV-1440952_6	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1440952_6	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1440952_7	K06400	383.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1440952_7	phrog_95	420.9	0	integrase	integration and excision
UniRef90	UHGV-1440952_7	UniRef90_UPI00094E315D	778.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1440952_7	1123309.AQYB01000022_gene10	597.0	0	COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-1440952_7	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1440952_7	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1440952_7	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1440952_7	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1440952_7	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_8	phrog_12172	167.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1440952_8	997830.HMPREF1124_0617	144.0	2.24208e-44	N/A	N/A
KOfam	UHGV-1440952_9	K01447	58.2	1.5e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1440952_9	phrog_1110	332.0	0	endolysin	lysis
UniRef90	UHGV-1440952_9	UniRef90_X8KD37	483.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1440952_9	936580.HMPREF1516_0702	483.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1440952_9	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1440952_9	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
Pfam	UHGV-1440952_9	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
COG	UHGV-1440952_9	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1440952_9	PF19127,PF01510,TIGR04035,COG5263	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_10	phrog_608	146.9	4.2039e-44	holin	lysis
UniRef90	UHGV-1440952_10	UniRef90_UPI001CBF2642	187.0	0	phage holin	N/A
eggNOG-mapper	UHGV-1440952_10	1000588.HMPREF9965_1685	189.0	0	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1440952_10	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1440952_10	TIGR01673.1	N/A	N/A	phage holin	N/A
PHROG	UHGV-1440952_11	phrog_4257	145.3	2.10195e-43	N/A	unknown function
UniRef90	UHGV-1440952_11	UniRef90_A0A139QI86	152.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-1440952_11	1095737.HMPREF1110_1750	217.0	0	N/A	N/A
PHROG	UHGV-1440952_12	phrog_1554	242.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1440952_12	1095737.HMPREF1110_1749	373.0	0	N/A	N/A
structural_annotation	UHGV-1440952_12	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_13	phrog_12683	112.2	1.9e-33	N/A	unknown function
UniRef90	UHGV-1440952_13	UniRef90_A0A081R6K4	59.3	0.000000000369	ATP synthase F0 sector subunit C	N/A
eggNOG-mapper	UHGV-1440952_13	1095737.HMPREF1110_1748	59.7	0.0000000000436	N/A	N/A
PHROG	UHGV-1440952_14	phrog_2270	845.8	0	N/A	unknown function
UniRef90	UHGV-1440952_14	UniRef90_A0A1X1L0Z3	1989.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1440952_14	768726.HMPREF9178_1052	1199.0	0	N/A	N/A
Pfam	UHGV-1440952_14	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1440952_14	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1440952_14	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1440952_14	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1440952_14	PF14594,PF21582,TIGR01665,NF033675,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_15	phrog_33	71.4	1.8e-20	distal tail protein Dit	tail
UniRef90	UHGV-1440952_15	UniRef90_V8IJG6	421.0	0	Adenylosuccinate synthetase	N/A
eggNOG-mapper	UHGV-1440952_15	1054460.SPPN_00450	421.0	0	N/A	N/A
COG	UHGV-1440952_15	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1440952_15	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_16	phrog_58	400.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1440952_16	UniRef90_A0A0T8EK87	967.0	0	PblA	N/A
eggNOG-mapper	UHGV-1440952_16	585203.SMSK564_1276	628.0	0	phage tail tape measure protein	N/A
COG	UHGV-1440952_16	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1440952_16	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_17	phrog_1633	187.8	0	N/A	unknown function
UniRef90	UHGV-1440952_17	UniRef90_UPI00156526D2	228.0	0	N/A	N/A
eggNOG-mapper	UHGV-1440952_17	585203.SMSK564_1277	244.0	0	N/A	N/A
Pfam	UHGV-1440952_17	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1440952_17	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_18	phrog_1526	114.3	4.2e-34	N/A	unknown function
UniRef90	UHGV-1440952_18	UniRef90_A0A359YJY2	89.0	2.72e-21	N/A	N/A
eggNOG-mapper	UHGV-1440952_18	1121864.OMO_02159	85.9	6.92e-21	N/A	N/A
PHROG	UHGV-1440952_19	phrog_117	185.4	0	major tail protein	tail
UniRef90	UHGV-1440952_19	UniRef90_A0A1X1K6H7	286.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1440952_19	585203.SMSK564_1279	291.0	0	domain, Protein	N/A
COG	UHGV-1440952_19	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1440952_19	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_20	phrog_123	69.9	3.7e-20	tail terminator	connector
UniRef90	UHGV-1440952_20	UniRef90_A0A0E8ZUI3	219.0	0	Gp45	N/A
eggNOG-mapper	UHGV-1440952_20	585203.SMSK564_1280	169.0	0	N/A	N/A
structural_annotation	UHGV-1440952_20	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_21	phrog_387	90.5	1e-26	neck protein	connector
UniRef90	UHGV-1440952_21	UniRef90_A0A0E9GXC0	137.0	1.05001e-40	N/A	N/A
eggNOG-mapper	UHGV-1440952_21	12390.Q77MU9_9CAUD	54.7	0.00000000688	N/A	N/A
PHROG	UHGV-1440952_22	phrog_501	103.7	1.1e-30	head closure Hc1	connector
UniRef90	UHGV-1440952_22	UniRef90_A0A139NBR3	177.0	0	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1440952_22	157924.Q7Y4I1_9CAUD	176.0	0	N/A	N/A
structural_annotation	UHGV-1440952_22	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_23	phrog_137	144.0	3.29305e-43	head-tail adaptor Ad1	connector
UniRef90	UHGV-1440952_23	UniRef90_A0A0T8PI38	285.0	0	Gp42	N/A
eggNOG-mapper	UHGV-1440952_23	585203.SMSK564_1282	198.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1440952_23	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1440952_23	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_24	phrog_1539	85.3	4.5e-25	Arc-like repressor	transcription regulation
UniRef90	UHGV-1440952_24	UniRef90_S7YZE5	125.0	1.6e-36	HeH domain-containing protein	N/A
Pfam	UHGV-1440952_24	PF12949	N/A	N/A	HeH/LEM domain	HeH
COG	UHGV-1440952_24	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1440952_24	PF12949	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_25	phrog_32396	161.2	0	N/A	unknown function
UniRef90	UHGV-1440952_25	UniRef90_A0A1X1K5N0	582.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1440952_25	1121864.OMO_02152	467.0	0	Phage capsid family	N/A
Pfam	UHGV-1440952_25	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1440952_25	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1440952_25	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1440952_26	phrog_36217	234.6	0	N/A	unknown function
UniRef90	UHGV-1440952_26	UniRef90_A0A1X1K686	266.0	0	Phage scaffold protein	N/A
eggNOG-mapper	UHGV-1440952_26	768726.HMPREF9178_1064	164.0	0	N/A	N/A
Pfam	UHGV-1440952_26	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1440952_26	PF14265	N/A	N/A	N/A	N/A