UHGV-1441727 (vOTU-035095)

Viral Genome: UHGV-1441727

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1441727
vOTU ID	vOTU-035095
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0223809
Associated BioSample	SAMN00715149
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	76.14 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9833
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.57
Jumbo phage	No

Genome content
Genome length (bp)	32,196
GC content	53.76%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	58
CDS density	95%
Average CDS length (bps)	529.81
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 76.14)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1441727_1	UniRef90_A0A8D9PDQ3	89.7	1.61e-21	ECF sigma factor	N/A
Pfam	UHGV-1441727_1	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
PHROG	UHGV-1441727_2	phrog_435	59.1	8e-17	endolysin	lysis
UniRef90	UHGV-1441727_2	UniRef90_A0A8D9PDS4	366.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-1441727_2	1226322.HMPREF1545_01953	78.6	0.0000000000000145	N-acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-1441727_2	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1441727_2	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_3	phrog_881	92.0	2.6e-27	holin	lysis
UniRef90	UHGV-1441727_3	UniRef90_A0A8D9PDR9	100.0	1.63e-26	Holin	N/A
eggNOG-mapper	UHGV-1441727_3	742740.HMPREF9474_02251	85.5	3.24e-21	Putative phage holin Dp-1	N/A
Pfam	UHGV-1441727_3	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1441727_3	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_4	phrog_4105	100.8	7.2e-30	N/A	unknown function
UniRef90	UHGV-1441727_4	UniRef90_A0A8D9UHA9	182.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-1441727_4	411460.RUMTOR_01326	142.0	1.16028e-42	N/A	N/A
UniRef90	UHGV-1441727_7	UniRef90_A0A8D9PDI7	774.0	0	mRNA splicing protein	N/A
Pfam	UHGV-1441727_7	PF13964	N/A	N/A	Kelch motif	Kelch_6
structural_annotation	UHGV-1441727_7	PF16472,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_9	phrog_18725	69.1	1.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-1441727_9	1235797.C816_02657	78.6	0.0000000000000369	N/A	N/A
COG	UHGV-1441727_9	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-1441727_9	PF13754,COG2372	N/A	N/A	N/A	N/A
KOfam	UHGV-1441727_10	K01361	61.2	6.1e-18	E3.4.21.96; lactocepin [EC:3.4.21.96]	N/A
PHROG	UHGV-1441727_10	phrog_11157	232.1	0	N/A	unknown function
UniRef90	UHGV-1441727_10	UniRef90_UPI001C10C6DC	392.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1441727_10	1256908.HMPREF0373_00674	294.0	0	N/A	N/A
Pfam	UHGV-1441727_10	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-1441727_10	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-1441727_10	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-1441727_10	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_12	phrog_13879	246.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1441727_12	1226322.HMPREF1545_00061	498.0	0	N/A	N/A
structural_annotation	UHGV-1441727_12	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_13	phrog_1194	60.3	2.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-1441727_13	1226322.HMPREF1545_00060	238.0	0	N/A	N/A
structural_annotation	UHGV-1441727_13	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-1441727_14	K03529	42.8	0.0000000000021	smc; chromosome segregation protein	N/A
PHROG	UHGV-1441727_14	phrog_1535	124.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1441727_14	UniRef90_A0A810PX76	302.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1441727_14	1235797.C816_04182	239.0	0	SLT domain	N/A
COG	UHGV-1441727_14	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1441727_14	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_15	phrog_806	87.9	1.1e-25	N/A	unknown function
UniRef90	UHGV-1441727_15	UniRef90_A0A212ITM5	214.0	0	Telomeric repeat-binding factor 2	N/A
eggNOG-mapper	UHGV-1441727_15	476272.RUMHYD_01730	161.0	0	N/A	N/A
Pfam	UHGV-1441727_15	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-1441727_15	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_16	phrog_706	114.8	6.2e-34	N/A	unknown function
UniRef90	UHGV-1441727_16	UniRef90_UPI000682A80B	221.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1441727_16	693746.OBV_18170	211.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1441727_16	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1441727_16	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_17	phrog_11299	70.8	2e-20	N/A	unknown function
eggNOG-mapper	UHGV-1441727_17	693746.OBV_18160	144.0	2.18042e-42	N/A	N/A
structural_annotation	UHGV-1441727_17	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_18	phrog_3099	88.4	8.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-1441727_18	1226322.HMPREF1545_00056	247.0	0	N/A	N/A
structural_annotation	UHGV-1441727_18	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_19	phrog_3266	61.4	1.2e-17	tail completion	connector
UniRef90	UHGV-1441727_19	UniRef90_A0A2Z4QA01	119.0	4.07e-32	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1441727_19	1232443.BAIA02000078_gene24	181.0	0	N/A	N/A
structural_annotation	UHGV-1441727_19	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_20	phrog_556	77.4	1.4e-22	minor head protein	head and packaging
UniRef90	UHGV-1441727_20	UniRef90_UPI00195E1497	185.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1441727_20	1226322.HMPREF1545_00054	155.0	0	Minor capsid protein	N/A
Pfam	UHGV-1441727_20	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1441727_20	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_21	phrog_3366	92.1	4.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-1441727_21	1226322.HMPREF1545_00053	153.0	0	N/A	N/A
structural_annotation	UHGV-1441727_21	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_22	phrog_541	106.7	1.2e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-1441727_22	642492.Clole_0822	68.9	0.000000000000508	N/A	N/A
PHROG	UHGV-1441727_23	phrog_10	174.4	0	major head protein	head and packaging
UniRef90	UHGV-1441727_23	UniRef90_A0A2U1BEF2	511.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1441727_23	1226322.HMPREF1545_00050	473.0	0	Phage capsid family	N/A
Pfam	UHGV-1441727_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1441727_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1441727_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1441727_23	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_24	phrog_2303	57.5	1.8e-16	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1441727_24	1226322.HMPREF1545_00049	154.0	2.8026e-45	N/A	N/A
PHROG	UHGV-1441727_26	phrog_581	279.7	0	minor head protein	head and packaging
UniRef90	UHGV-1441727_26	UniRef90_UPI001D080D49	540.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1441727_26	1226322.HMPREF1545_00046	360.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1441727_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1441727_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1441727_26	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_28	phrog_533	384.2	0	portal protein	head and packaging
UniRef90	UHGV-1441727_28	UniRef90_A0A1C5N775	717.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1441727_28	1226322.HMPREF1545_00044	687.0	0	N/A	N/A
Pfam	UHGV-1441727_28	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1441727_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1441727_29	K06909	387.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1441727_29	phrog_3717	164.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1441727_29	UniRef90_A0A2U1BEH4	750.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1441727_29	33035.JPJF01000106_gene3136	462.0	0	Terminase small subunit	N/A
Pfam	UHGV-1441727_29	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1441727_29	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1441727_29	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1441727_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1441727_29	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1441727_31	K07319	120.2	1.8e-35	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1441727_31	phrog_498	425.6	0	DNA methyltransferase	other
UniRef90	UHGV-1441727_31	UniRef90_A0A810Q3Z7	447.0	0	N6_N4_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-1441727_31	1423758.BN55_01455	419.0	0	DNA methylase	N/A
PADLOC	UHGV-1441727_31	MTase_II_00015	225.9	0	Type II methyltransferase	RM
Pfam	UHGV-1441727_31	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1441727_31	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1441727_31	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1441727_31	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
Pfam	UHGV-1441727_32	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-1441727_33	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_36	phrog_22543	42.8	0.0000000000083	N/A	unknown function
UniRef90	UHGV-1441727_36	UniRef90_A0A8D9PDK2	124.0	4.28e-35	Zinc-ribbon containing domain	N/A
PHROG	UHGV-1441727_38	phrog_38832	70.5	1.9e-21	N/A	unknown function
eggNOG-mapper	UHGV-1441727_38	445972.ANACOL_00165	75.1	0.0000000000000242	N/A	N/A
KOfam	UHGV-1441727_42	K00558	47.5	0.00000000000013	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1441727_42	phrog_757	121.3	4.8e-36	DNA methyltransferase	other
UniRef90	UHGV-1441727_42	UniRef90_A0A8D9PDD1	389.0	0	DNA (Cytosine 5) methyltransferase	N/A
eggNOG-mapper	UHGV-1441727_42	622312.ROSEINA2194_01264	348.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-1441727_42	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1441727_42	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1441727_42	PF00145,MF_00341,TIGR00675,COG0270	N/A	N/A	N/A	N/A
UniRef90	UHGV-1441727_45	UniRef90_A0A098GES5	96.7	1.23e-23	Putative phage associated protein	N/A
structural_annotation	UHGV-1441727_45	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_46	phrog_190	105.4	4.4e-31	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1441727_46	UniRef90_A0A8D9PDD6	267.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-1441727_46	1226322.HMPREF1545_00295	119.0	2.42e-32	N/A	N/A
Pfam	UHGV-1441727_46	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1441727_46	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_48	phrog_15768	102.8	8e-33	N/A	unknown function
UniRef90	UHGV-1441727_48	UniRef90_A0A8D9PDU3	295.0	0	N/A	N/A
eggNOG-mapper	UHGV-1441727_48	203119.Cthe_2466	85.1	9.27e-17	N/A	N/A
Pfam	UHGV-1441727_48	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1441727_48	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1441727_50	K03111	145.2	5.99756e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1441727_50	phrog_44	143.7	9.09443e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1441727_50	UniRef90_UPI001958E09C	202.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1441727_50	693746.OBV_19910	197.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1441727_50	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1441727_50	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1441727_50	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1441727_50	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1441727_50	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1441727_51	PF12844,MF_00535,NF041951,COG5499	N/A	N/A	N/A	N/A
PHROG	UHGV-1441727_52	phrog_7566	102.0	2.6e-30	N/A	unknown function
UniRef90	UHGV-1441727_52	UniRef90_A0A8D9UHC0	146.0	6.44597e-44	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-1441727_52	693746.OBV_24070	116.0	1.55e-32	N/A	N/A
PHROG	UHGV-1441727_54	phrog_72	52.9	0.0000000000000021	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1441727_54	UniRef90_A0A8D9PDS2	353.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1441727_54	445972.ANACOL_01825	128.0	4.58e-35	N/A	N/A
structural_annotation	UHGV-1441727_54	PF05772	N/A	N/A	N/A	N/A
UniRef90	UHGV-1441727_55	UniRef90_B0PAM4	157.0	1.4013e-45	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-1441727_55	PF12684,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
UniRef90	UHGV-1441727_56	UniRef90_A0A845QLQ8	192.0	0	N/A	N/A
eggNOG-mapper	UHGV-1441727_56	33035.JPJF01000135_gene5082	117.0	5.15e-30	N/A	N/A
Pfam	UHGV-1441727_56	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-1441727_56	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
UniRef90	UHGV-1441727_58	UniRef90_A0A8D9UH91	308.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1441727_58	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-1441727_58	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A