UHGV-1442471 (vOTU-100461)

Viral Genome: UHGV-1442471

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1442471
vOTU ID	vOTU-100461
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0206736
Associated BioSample	SAMEA2338690
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	68.15 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9811
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	33.87
Jumbo phage	No

Genome content
Genome length (bp)	29,182
GC content	50.73%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	94%
Average CDS length (bps)	570.19
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 68.15)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1442471_2	1408437.JNJN01000043_gene802	184.0	0	N/A	N/A
PHROG	UHGV-1442471_3	phrog_16490	265.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1442471_3	1408437.JNJN01000043_gene803	296.0	0	N/A	N/A
eggNOG-mapper	UHGV-1442471_5	445972.ANACOL_01878	62.8	0.00000000045	N/A	N/A
PHROG	UHGV-1442471_7	phrog_8887	57.2	1.6e-16	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1442471_7	UniRef90_A0A847W8Z4	102.0	1.57e-26	Type II toxin-antitoxin system HicA family toxin	N/A
eggNOG-mapper	UHGV-1442471_7	913865.DOT_3277	82.4	1.51e-19	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-1442471_7	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
structural_annotation	UHGV-1442471_7	COG1724	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_8	phrog_9151	140.0	7.49975e-42	HicB-like antitoxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1442471_8	UniRef90_A0A1H3Z8X0	140.0	4.37001e-40	Predicted nuclease of the RNAse H fold, HicB family	N/A
eggNOG-mapper	UHGV-1442471_8	689781.AUJX01000002_gene3113	139.0	1.43e-40	HicB family	N/A
Pfam	UHGV-1442471_8	PF05534	N/A	N/A	HicB family	HicB
COG	UHGV-1442471_8	COG4226	N/A	N/A	Predicted nuclease of the RNAse H fold, HicB family	N/A
UniRef90	UHGV-1442471_10	UniRef90_A0A1C6JAI6	84.7	8.5e-20	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-1442471_10	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1442471_11	K01447	65.6	9.2e-19	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1442471_11	phrog_15001	174.2	0	endolysin	lysis
UniRef90	UHGV-1442471_11	UniRef90_A0A1C6D3S9	529.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1442471_11	1378168.N510_01539	323.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1442471_11	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1442471_11	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1442471_11	PF01510,MF_04111,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_14	phrog_1129	68.9	4.7e-20	holin	lysis
UniRef90	UHGV-1442471_14	UniRef90_A0A416QZD1	126.0	3.54e-36	Enolase	N/A
eggNOG-mapper	UHGV-1442471_14	1007096.BAGW01000036_gene2663	125.0	2.09e-36	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1442471_14	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1442471_14	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_15	phrog_937	54.6	0.0000000000000016	hemolysin	other
eggNOG-mapper	UHGV-1442471_15	428125.CLOLEP_00170	61.2	0.000000000164	N/A	N/A
PHROG	UHGV-1442471_20	phrog_13589	72.8	2.10195e-43	N/A	unknown function
eggNOG-mapper	UHGV-1442471_20	411471.SUBVAR_06929	328.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1442471_20	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
eggNOG-mapper	UHGV-1442471_21	1297617.JPJD01000099_gene2171	108.0	1.13e-24	Collagen triple helix repeat protein	N/A
COG	UHGV-1442471_21	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
structural_annotation	UHGV-1442471_21	PF10651,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_23	phrog_32744	657.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1442471_23	1120998.AUFC01000030_gene2247	243.0	0	N/A	N/A
structural_annotation	UHGV-1442471_23	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1442471_24	1120998.AUFC01000030_gene2246	105.0	4.36e-26	N/A	N/A
structural_annotation	UHGV-1442471_24	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_25	phrog_23464	271.7	0	N/A	unknown function
UniRef90	UHGV-1442471_25	UniRef90_A0A1C6B4Q1	774.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1442471_25	665950.HMPREF1025_02660	337.0	0	phage tail tape measure protein	N/A
COG	UHGV-1442471_25	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1442471_25	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_26	phrog_706	134.2	7.1e-40	N/A	unknown function
UniRef90	UHGV-1442471_26	UniRef90_A0A1C6B556	422.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1442471_26	1540257.JQMW01000013_gene734	103.0	8e-25	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1442471_26	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1442471_26	PF06854	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1442471_27	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_28	phrog_820	85.4	5e-25	major tail protein	tail
UniRef90	UHGV-1442471_28	UniRef90_A0A174M1L1	207.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1442471_28	411461.DORFOR_01172	200.0	0	N/A	N/A
structural_annotation	UHGV-1442471_28	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_29	phrog_3266	60.4	2.6e-17	tail completion	connector
structural_annotation	UHGV-1442471_29	PF12691	N/A	N/A	N/A	N/A
UniRef90	UHGV-1442471_30	UniRef90_UPI001C3B04D8	90.9	7.19e-21	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1442471_30	411461.DORFOR_01170	55.1	0.0000000924	Minor capsid protein	N/A
Pfam	UHGV-1442471_30	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1442471_30	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_31	phrog_3366	60.1	3.5e-17	N/A	unknown function
Pfam	UHGV-1442471_31	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1442471_31	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_32	phrog_541	47.6	0.00000000000025	head-tail adaptor	connector
UniRef90	UHGV-1442471_32	UniRef90_A0A345MKD1	61.2	0.000000000786	Putative head-tail connector protein	N/A
PHROG	UHGV-1442471_33	phrog_544	135.7	2.5e-40	major head protein	head and packaging
UniRef90	UHGV-1442471_33	UniRef90_A0A1C6B5R0	753.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1442471_33	1232453.BAIF02000011_gene3359	380.0	0	N/A	N/A
Pfam	UHGV-1442471_33	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1442471_33	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1442471_34	UniRef90_A0A1C6B5I1	371.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1442471_34	1125725.HMPREF1325_1331	56.2	0.000000334	Phage minor structural protein GP20	N/A
Pfam	UHGV-1442471_34	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1442471_34	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_37	phrog_581	179.7	0	minor head protein	head and packaging
UniRef90	UHGV-1442471_37	UniRef90_A0A1C6B625	732.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1442471_37	411471.SUBVAR_06995	165.0	5.53513e-43	N/A	N/A
Pfam	UHGV-1442471_37	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1442471_37	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1442471_37	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_38	phrog_533	164.8	0	portal protein	head and packaging
UniRef90	UHGV-1442471_38	UniRef90_A0A0X8VBF2	190.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-1442471_38	1235799.C818_04218	142.0	9.84e-35	N/A	N/A
structural_annotation	UHGV-1442471_38	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1442471_39	K06909	59.2	4.9e-17	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1442471_39	phrog_29775	245.2	0	N/A	unknown function
UniRef90	UHGV-1442471_39	UniRef90_A0A1C6B5W6	881.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1442471_39	428125.CLOLEP_01804	562.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1442471_39	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1442471_39	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1442471_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1442471_39	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1442471_40	UniRef90_UPI0018AC41F1	183.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1442471_40	1226322.HMPREF1545_00042	159.0	0	N/A	N/A
structural_annotation	UHGV-1442471_40	PF13542	N/A	N/A	N/A	N/A
UniRef90	UHGV-1442471_41	UniRef90_A0A8J6J3G6	138.0	1.46996e-41	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1442471_41	1226322.HMPREF1545_00039	96.3	1.77e-25	sequence-specific DNA binding	N/A
Pfam	UHGV-1442471_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1442471_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1442471_41	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_44	phrog_801	94.8	9.8e-28	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-1442471_44	UniRef90_A0A1C6B6A0	209.0	0	N/A	N/A
eggNOG-mapper	UHGV-1442471_44	1244856.K4PY83_9CAUD	74.7	0.0000000000000104	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-1442471_44	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1442471_44	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_46	phrog_1934	127.0	7.2e-38	N/A	unknown function
UniRef90	UHGV-1442471_46	UniRef90_UPI0018AC0226	283.0	0	zinc-finger-containing protein	N/A
eggNOG-mapper	UHGV-1442471_46	397290.C810_01488	160.0	0	zinc-finger-containing domain	N/A
Pfam	UHGV-1442471_46	PF11672	N/A	N/A	zinc-finger-containing domain	DUF3268
structural_annotation	UHGV-1442471_46	PF11672	N/A	N/A	N/A	N/A
PHROG	UHGV-1442471_47	phrog_59	123.8	2.6e-37	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1442471_47	UniRef90_A0A0R1HBG4	160.0	1.4013e-45	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1442471_47	1206110.L0P6F5_9CAUD	157.0	9.80909e-45	sequence-specific DNA binding transcription factor activity	N/A
PADLOC	UHGV-1442471_47	HEase_00016	82.8	6e-29	homing endonuclease	RM
Pfam	UHGV-1442471_47	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-1442471_47	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-1442471_47	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
PHROG	UHGV-1442471_48	phrog_22543	41.0	0.00000000003	N/A	unknown function