UHGV-1442499 (vOTU-157029)

Viral Genome: UHGV-1442499

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1442499
vOTU ID	vOTU-157029
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0144798
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	52.03 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	19
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9817
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	41.19
Jumbo phage	No

Genome content
Genome length (bp)	19,845
GC content	36.58%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	22
CDS density	93%
Average CDS length (bps)	835.09
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 52.03)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1442499_1	phrog_7298	83.4	1.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-1442499_1	1158602.I590_02582	80.1	3.41e-18	N/A	N/A
PHROG	UHGV-1442499_2	phrog_1665	372.3	0	N/A	unknown function
UniRef90	UHGV-1442499_2	UniRef90_U6S2X0	503.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1442499_2	1231377.C426_0890	215.0	0	N/A	N/A
Pfam	UHGV-1442499_2	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-1442499_2	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_3	phrog_1067	448.9	0	minor head protein	head and packaging
UniRef90	UHGV-1442499_3	UniRef90_UPI0010F85B65	1161.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1442499_3	1158601.I585_01146	999.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1442499_3	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1442499_3	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1442499_3	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1442499_3	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1442499_4	phrog_33	78.0	1.8e-22	distal tail protein Dit	tail
UniRef90	UHGV-1442499_4	UniRef90_V7ZMX6	513.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1442499_4	1158601.I585_01147	340.0	0	phage tail	N/A
NCBIFam	UHGV-1442499_4	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1442499_4	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1442499_4	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_5	phrog_5493	262.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1442499_5	UniRef90_R2PIF0	628.0	0	Rhodanese domain-containing protein	N/A
eggNOG-mapper	UHGV-1442499_5	1234679.BN424_2614	370.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-1442499_5	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1442499_5	PF20155,TIGR01760,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_6	phrog_706	166.6	0	N/A	unknown function
UniRef90	UHGV-1442499_6	UniRef90_A0A828QPX0	257.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1442499_6	1158601.I585_01149	236.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1442499_6	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1442499_6	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_7	phrog_1061	104.9	5e-31	N/A	unknown function
eggNOG-mapper	UHGV-1442499_7	1158601.I585_01150	126.0	1.61e-35	N/A	N/A
structural_annotation	UHGV-1442499_7	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_8	phrog_341	123.4	1.4e-36	major tail protein	tail
UniRef90	UHGV-1442499_8	UniRef90_UPI000A191C1D	192.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1442499_8	1486428.A0A097BY60_9CAUD	181.0	0	peptidase activity	N/A
structural_annotation	UHGV-1442499_8	PF02368,MF_04116,TIGR04225,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_9	phrog_820	180.6	0	major tail protein	tail
UniRef90	UHGV-1442499_9	UniRef90_A0A8I1FBJ6	258.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1442499_9	1158601.I585_01151	244.0	0	N/A	N/A
structural_annotation	UHGV-1442499_9	PF08813,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_10	phrog_913	151.1	2.8026e-45	minor head protein	head and packaging
UniRef90	UHGV-1442499_10	UniRef90_V7ZRB1	251.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1442499_10	1158601.I585_01152	201.0	0	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-1442499_10	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1442499_10	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_11	phrog_556	93.2	1.8e-27	minor head protein	head and packaging
UniRef90	UHGV-1442499_11	UniRef90_V7ZQV6	213.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1442499_11	1158601.I585_01153	178.0	0	Minor capsid protein	N/A
Pfam	UHGV-1442499_11	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1442499_11	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_12	phrog_793	117.6	5e-35	head-tail adaptor	connector
UniRef90	UHGV-1442499_12	UniRef90_A0A4S2CEY0	183.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1442499_12	768486.EHR_02605	185.0	0	Minor capsid protein	N/A
Pfam	UHGV-1442499_12	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-1442499_12	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_13	phrog_541	128.1	3.2e-38	head-tail adaptor	connector
UniRef90	UHGV-1442499_13	UniRef90_I6SVS1	173.0	0	Protein gp8	N/A
eggNOG-mapper	UHGV-1442499_13	1234679.BN424_2621	196.0	0	N/A	N/A
PHROG	UHGV-1442499_14	phrog_840	430.4	0	major head protein	head and packaging
UniRef90	UHGV-1442499_14	UniRef90_A0A8A6I2C9	556.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1442499_14	1229517.AMFD01000018_gene184	459.0	0	N/A	N/A
structural_annotation	UHGV-1442499_14	PF03864,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_15	phrog_194	138.1	5.70006e-41	head scaffolding protein	head and packaging
UniRef90	UHGV-1442499_15	UniRef90_UPI001AD6F0F1	217.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1442499_15	1158601.I585_01157	214.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1442499_15	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1442499_15	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_16	phrog_8550	138.5	9.30042e-42	N/A	unknown function
PHROG	UHGV-1442499_17	phrog_581	365.6	0	minor head protein	head and packaging
UniRef90	UHGV-1442499_17	UniRef90_A0A7Z8WPA9	719.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1442499_17	1158601.I585_01158	675.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1442499_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1442499_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1442499_17	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_18	phrog_533	598.2	0	portal protein	head and packaging
UniRef90	UHGV-1442499_18	UniRef90_A0A2N8PYJ9	810.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1442499_18	1158601.I585_01160	791.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1442499_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1442499_18	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1442499_18	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_19	phrog_29775	252.3	0	N/A	unknown function
UniRef90	UHGV-1442499_19	UniRef90_U6S3B8	813.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1442499_19	1229517.AMFD01000018_gene188	591.0	0	Phage terminase, large subunit, PBSX family	N/A
NCBIFam	UHGV-1442499_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1442499_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1442499_19	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_20	phrog_509	282.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-1442499_20	UniRef90_UPI001A964EE7	465.0	0	phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1442499_20	1158601.I585_00702	242.0	0	DNA packaging	N/A
Pfam	UHGV-1442499_20	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-1442499_20	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-1442499_20	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1442499_20	PF10668,PF01920,NF040601,COG5484	N/A	N/A	N/A	N/A
PHROG	UHGV-1442499_22	phrog_248	133.8	9.2e-40	transcriptional activator	transcription regulation
UniRef90	UHGV-1442499_22	UniRef90_D2IYV6	257.0	0	Transcriptional regulator ArpU family	N/A
eggNOG-mapper	UHGV-1442499_22	1201292.DR75_1521	262.0	0	ArpU family	N/A
NCBIFam	UHGV-1442499_22	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-1442499_22	PF05263,MF_00674,TIGR01637,COG1191	N/A	N/A	N/A	N/A