UHGV-1443200 (vOTU-109284)

Viral Genome: UHGV-1443200

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1443200
vOTU ID	vOTU-109284
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0126022
Associated BioSample	SAMEA2738077
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.59 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9807
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.59
Jumbo phage	No

Genome content
Genome length (bp)	17,800
GC content	40.21%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	21
CDS density	92%
Average CDS length (bps)	783.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.59)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1443200_1	phrog_1204	432.7	0	tail protein	tail
UniRef90	UHGV-1443200_1	UniRef90_F9PZ45	606.0	0	Tape measure domain protein	N/A
eggNOG-mapper	UHGV-1443200_1	1035189.HMPREF9954_0317	606.0	0	phage tail tape measure protein	N/A
COG	UHGV-1443200_1	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1443200_2	phrog_33	92.8	6e-27	distal tail protein Dit	tail
UniRef90	UHGV-1443200_2	UniRef90_UPI00094F352E	459.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1443200_2	173707.Q938K2_9CAUD	346.0	0	Phage tail protein	N/A
Pfam	UHGV-1443200_2	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1443200_2	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-1443200_2	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1443200_3	phrog_2270	403.7	0	N/A	unknown function
UniRef90	UHGV-1443200_3	UniRef90_UPI0012BD39E8	1002.0	0	carbohydrate binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1443200_3	1005705.HMPREF9967_1053	690.0	0	domain protein	N/A
NCBIFam	UHGV-1443200_3	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1443200_3	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1443200_3	PF14594,PF07902,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-1443200_4	UniRef90_F5W039	73.6	2.37e-16	Conserved domain protein	N/A
PHROG	UHGV-1443200_5	phrog_1554	215.1	0	N/A	unknown function
UniRef90	UHGV-1443200_5	UniRef90_A0A359YI08	168.0	0	N/A	N/A
eggNOG-mapper	UHGV-1443200_5	1005705.HMPREF9967_1055	332.0	0	N/A	N/A
structural_annotation	UHGV-1443200_5	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1443200_6	phrog_4257	164.3	0	N/A	unknown function
UniRef90	UHGV-1443200_6	UniRef90_F9PZ52	219.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1443200_6	997830.HMPREF1124_0612	222.0	0	N/A	N/A
PHROG	UHGV-1443200_7	phrog_33625	73.1	2.2e-21	holin	lysis
UniRef90	UHGV-1443200_7	UniRef90_UPI00094E4C5E	169.0	0	phage holin	N/A
eggNOG-mapper	UHGV-1443200_7	644007.C5J977_9CAUD	117.0	1.9e-33	Bacteriophage holin	N/A
Pfam	UHGV-1443200_7	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1443200_7	TIGR01598.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-1443200_7	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1443200_8	phrog_32123	387.7	0	N/A	unknown function
UniRef90	UHGV-1443200_8	UniRef90_UPI00094EEBC2	886.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1443200_8	997830.HMPREF1124_0614	546.0	0	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1443200_8	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
structural_annotation	UHGV-1443200_8	PF10651,NF032891	N/A	N/A	N/A	N/A
KOfam	UHGV-1443200_9	K01447	58.3	1.5e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1443200_9	phrog_1110	343.9	0	endolysin	lysis
UniRef90	UHGV-1443200_9	UniRef90_A0A0F3HHG8	504.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1443200_9	1566990.A0A0A0YV41_9CAUD	458.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1443200_9	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
structural_annotation	UHGV-1443200_9	PF19127,PF01510,TIGR04035,COG5263	N/A	N/A	N/A	N/A
KOfam	UHGV-1443200_10	K06400	388.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1443200_10	phrog_95	431.3	0	integrase	integration and excision
UniRef90	UHGV-1443200_10	UniRef90_UPI00094E315D	870.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1443200_10	1035189.HMPREF9954_0280	618.0	0	COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-1443200_10	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1443200_10	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1443200_10	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1443200_10	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1443200_11	phrog_4980	151.2	1.4013e-45	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1443200_11	UniRef90_A0A2C5WGT8	133.0	2.08e-37	Immunity protein	N/A
eggNOG-mapper	UHGV-1443200_11	1385385.U6E9C7_9CAUD	111.0	2.12e-29	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-1443200_11	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
KOfam	UHGV-1443200_12	K01356	86.1	5.5e-25	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1443200_12	phrog_4	164.0	0	transcriptional repressor	transcription regulation
UniRef90	UHGV-1443200_12	UniRef90_UPI0005BDB6D8	377.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1443200_12	1314.HKU360_01262	352.0	0	Peptidase S24-like	N/A
Pfam	UHGV-1443200_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1443200_12	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1443200_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1443200_12	PF00717,PF01381,MF_00015,NF007621,NF041951,COG2932	N/A	N/A	N/A	N/A
KOfam	UHGV-1443200_13	K22300	47.5	0.00000000000037	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1443200_13	phrog_8	64.6	2.4e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1443200_13	UniRef90_UPI0013DF0CDE	101.0	7.4e-27	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1443200_13	1314.HKU360_01261	97.1	6.59e-26	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1443200_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1443200_13	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1443200_13	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1443200_14	K07741	213.4	0	antB; anti-repressor protein	N/A
PHROG	UHGV-1443200_14	phrog_63	191.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1443200_14	UniRef90_F9PZ13	422.0	0	Phage antirepressor protein KilAC domain protein	N/A
eggNOG-mapper	UHGV-1443200_14	1035189.HMPREF9954_0285	422.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1443200_14	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1443200_14	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1443200_14	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1443200_14	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-1443200_15	phrog_3624	77.3	1.1e-22	N/A	unknown function
PHROG	UHGV-1443200_16	phrog_3819	91.3	5.2e-27	N/A	unknown function
PHROG	UHGV-1443200_17	phrog_8196	66.4	4e-19	N/A	unknown function
PHROG	UHGV-1443200_18	phrog_4614	88.5	3.7e-26	N/A	unknown function
PHROG	UHGV-1443200_19	phrog_2553	97.0	7.6e-29	N/A	unknown function
PHROG	UHGV-1443200_20	phrog_2760	357.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1443200_20	UniRef90_UPI00065F7633	431.0	0	phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-1443200_20	1035189.HMPREF9954_0290	402.0	0	RecT family	N/A
Pfam	UHGV-1443200_20	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1443200_20	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-1443200_20	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1443200_20	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1443200_21	1035189.HMPREF9954_0291	50.1	0.000000555	N/A	N/A