UHGV-1443221 (vOTU-070923)

Viral Genome: UHGV-1443221

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1443221
vOTU ID	vOTU-070923
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0206832
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	94.16 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9778
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	50.12
Jumbo phage	No

Genome content
Genome length (bp)	29,194
GC content	40.59%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	53
CDS density	92%
Average CDS length (bps)	506.60
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 94.16)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1443221_1	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-1443221_2	K07729	56.7	4.7e-16	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1443221_2	phrog_8	84.3	2e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1443221_2	UniRef90_UPI001D05EDBA	143.0	5.29971e-42	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1443221_2	1111454.HMPREF1250_1028	101.0	3.4e-26	carbohydrate binding	N/A
PADLOC	UHGV-1443221_2	retron_type_VI_hth_cluster2_1	43.9	0.0000000000054	N/A	Retron
Pfam	UHGV-1443221_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1443221_2	COG2390	N/A	N/A	DNA-binding transcriptional regulator LsrR, DeoR family	N/A
structural_annotation	UHGV-1443221_2	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1443221_3	K07729	61.2	2.3e-17	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1443221_3	phrog_8	56.7	5.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1443221_3	UniRef90_UPI001BE45F5C	61.6	0.000000000071	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1443221_3	1158602.I590_02948	60.5	0.0000000000853	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1443221_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1443221_3	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1443221_3	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1443221_4	NF040990	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_10	phrog_7566	80.0	1.9e-23	N/A	unknown function
eggNOG-mapper	UHGV-1443221_10	1410650.JHWL01000003_gene2846	48.9	0.00000876	N/A	N/A
PHROG	UHGV-1443221_15	phrog_2245	60.0	3.6e-17	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1443221_15	UniRef90_A0A2S0L5I7	104.0	2.15e-27	MazG domain-containing protein	N/A
Pfam	UHGV-1443221_15	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
PHROG	UHGV-1443221_16	phrog_236	102.7	6.4e-30	nucleotide kinase	other
UniRef90	UHGV-1443221_16	UniRef90_UPI000B7E2B74	96.7	1.43e-23	N/A	N/A
eggNOG-mapper	UHGV-1443221_16	936375.HMPREF1152_1061	88.2	2.11e-20	N/A	N/A
Pfam	UHGV-1443221_16	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1443221_16	PF11753	N/A	N/A	N/A	N/A
KOfam	UHGV-1443221_17	K00558	221.2	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1443221_17	phrog_116	240.9	0	DNA methyltransferase	other
UniRef90	UHGV-1443221_17	UniRef90_UPI00046534C2	486.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1443221_17	759913.SDSE_1517	359.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1443221_17	MTase_II_00058	224.6	0	Type II methyltransferase	RM
Pfam	UHGV-1443221_17	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1443221_17	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1443221_17	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1443221_17	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_18	phrog_918	126.8	5e-38	N/A	unknown function
UniRef90	UHGV-1443221_18	UniRef90_UPI0010308CF9	130.0	6.22e-38	N/A	N/A
eggNOG-mapper	UHGV-1443221_18	1321782.HMPREF1986_00359	129.0	4.25e-38	N/A	N/A
Pfam	UHGV-1443221_18	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1443221_18	PF19791	N/A	N/A	N/A	N/A
UniRef90	UHGV-1443221_19	UniRef90_UPI000403EAB4	51.2	0.00000145	N/A	N/A
Pfam	UHGV-1443221_19	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1443221_20	phrog_98	88.5	6.4e-26	N/A	unknown function
UniRef90	UHGV-1443221_20	UniRef90_E5BEY7	104.0	3.4e-26	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1443221_20	469604.HMPREF0946_01119	82.4	2.5e-18	YopX protein	N/A
Pfam	UHGV-1443221_20	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1443221_20	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1443221_20	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-1443221_22	K03111	144.3	1.3004e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1443221_22	phrog_44	142.1	3.20057e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1443221_22	UniRef90_A0A2S0L5J3	260.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1443221_22	936375.HMPREF1152_1764	211.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1443221_22	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1443221_22	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1443221_22	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1443221_22	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1443221_22	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_23	phrog_33451	48.9	0.000000000000048	N/A	unknown function
PHROG	UHGV-1443221_26	phrog_3584	168.6	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1443221_26	UniRef90_A0A1I5LZL1	132.0	8.98e-34	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-1443221_26	936375.HMPREF1152_0670	349.0	0	N/A	N/A
structural_annotation	UHGV-1443221_26	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_27	phrog_36	81.7	1.1e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1443221_27	UniRef90_J5WFY5	146.0	1.3004e-42	PF07374 family protein	N/A
eggNOG-mapper	UHGV-1443221_27	658655.HMPREF0988_02569	58.9	0.00000000499	sigma factor activity	N/A
Pfam	UHGV-1443221_27	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1443221_27	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1443221_27	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_28	phrog_21498	277.7	0	N/A	unknown function
UniRef90	UHGV-1443221_28	UniRef90_C7MM70	310.0	0	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-1443221_28	469378.Ccur_02830	310.0	0	DNA binding	N/A
PADLOC	UHGV-1443221_28	MTase_II_00015	72.5	6.8e-21	Type II methyltransferase	RM
Pfam	UHGV-1443221_28	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1443221_28	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1443221_28	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG5119	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_29	phrog_309	134.0	6.10001e-40	terminase small subunit	head and packaging
UniRef90	UHGV-1443221_29	UniRef90_UPI00138A20ED	121.0	3.03e-32	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1443221_29	1408437.JNJN01000045_gene597	110.0	1.48e-28	HNH endonuclease	N/A
COG	UHGV-1443221_29	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1443221_29	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_30	phrog_4581	106.2	3e-31	terminase small subunit	head and packaging
UniRef90	UHGV-1443221_30	UniRef90_A0A0U1L0W9	196.0	0	Prophage LambdaBa04, Gp54	N/A
eggNOG-mapper	UHGV-1443221_30	1123288.SOV_2c03680	196.0	0	adenylate kinase activity	N/A
Pfam	UHGV-1443221_30	PF01844	N/A	N/A	HNH endonuclease	HNH
Pfam	UHGV-1443221_30	PF13671	N/A	N/A	AAA domain	AAA_33
COG	UHGV-1443221_30	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1443221_30	PF13671,MF_03171,NF005251,NF008448,COG4639	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1443221_31	1123288.SOV_2c03670	52.0	0.00000054	N/A	N/A
structural_annotation	UHGV-1443221_31	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_32	phrog_9	310.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1443221_32	UniRef90_A0A1M6DQA4	557.0	0	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
eggNOG-mapper	UHGV-1443221_32	1123288.SOV_2c03650	478.0	0	Phage Terminase	N/A
Pfam	UHGV-1443221_32	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1443221_32	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1443221_32	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1443221_32	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_33	phrog_12	128.4	5.1e-38	portal protein	head and packaging
UniRef90	UHGV-1443221_33	UniRef90_A0A1M6DQ94	392.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1443221_33	1123288.SOV_2c03640	375.0	0	Phage portal protein	N/A
Pfam	UHGV-1443221_33	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1443221_33	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1443221_33	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1443221_34	K06904	132.6	3.8e-39	N/A	N/A
PHROG	UHGV-1443221_34	phrog_80	133.5	2.3e-39	head maturation protease	head and packaging
UniRef90	UHGV-1443221_34	UniRef90_A0A1C6JHE9	217.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1443221_34	457396.CSBG_01048	217.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1443221_34	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1443221_34	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1443221_34	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1443221_34	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_35	phrog_10	89.9	3.6e-26	major head protein	head and packaging
UniRef90	UHGV-1443221_35	UniRef90_A0A7G9W8B7	188.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1443221_35	293826.Amet_2414	177.0	0	Phage capsid family	N/A
Pfam	UHGV-1443221_35	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1443221_35	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1443221_35	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_37	phrog_32328	87.9	9.2e-26	N/A	unknown function
structural_annotation	UHGV-1443221_37	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
Pfam	UHGV-1443221_39	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1443221_39	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_40	phrog_88	108.6	5.2e-32	major tail protein	tail
UniRef90	UHGV-1443221_40	UniRef90_A0A373ZCY5	114.0	2.66e-28	Phage tail protein	N/A
eggNOG-mapper	UHGV-1443221_40	626523.GCWU000342_01020	76.3	0.0000000000000136	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1443221_40	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1443221_40	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_41	phrog_709	71.8	8.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-1443221_41	1122146.AUHP01000010_gene1064	63.2	0.0000000000559	N/A	N/A
structural_annotation	UHGV-1443221_41	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_42	phrog_58	154.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1443221_42	1123263.AUKY01000046_gene477	163.0	1.32e-39	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1443221_42	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1443221_42	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_43	phrog_33	53.1	0.0000000000000041	distal tail protein Dit	tail
UniRef90	UHGV-1443221_43	UniRef90_UPI0009854788	217.0	0	phage tail family protein	N/A
structural_annotation	UHGV-1443221_43	PF16774,PF21766,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_44	phrog_538	47.0	0.000000000000017	minor tail protein	tail
UniRef90	UHGV-1443221_44	UniRef90_A0A1I1Y2T7	231.0	0	Virus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-1443221_44	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1443221_44	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_45	phrog_1220	130.2	2.59997e-41	head protein	head and packaging
UniRef90	UHGV-1443221_45	UniRef90_R5M2M1	67.4	0.00000000103	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1443221_45	936375.HMPREF1152_0017	242.0	0	N/A	N/A
structural_annotation	UHGV-1443221_45	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-1443221_47	phrog_1009	44.0	0.0000000000029	N/A	unknown function
PHROG	UHGV-1443221_48	phrog_1129	77.7	7.7e-23	holin	lysis
UniRef90	UHGV-1443221_48	UniRef90_A0A2S0L5I2	127.0	1.14e-35	Holin	N/A
eggNOG-mapper	UHGV-1443221_48	1123075.AUDP01000020_gene1532	67.0	0.00000000000086	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1443221_48	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1443221_48	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1443221_49	K00689	67.9	4.3e-20	E2.4.1.5; dextransucrase [EC:2.4.1.5]	N/A
PHROG	UHGV-1443221_49	phrog_7854	110.5	7.39886e-43	endolysin	lysis
UniRef90	UHGV-1443221_49	UniRef90_A0A6L9HGM4	139.0	9.8e-36	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1443221_49	665950.HMPREF1025_01328	147.0	3.76e-39	CHAP domain	N/A
Pfam	UHGV-1443221_49	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1443221_49	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1443221_49	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1443221_49	PF19127,PF05382,TIGR04035,NF008096,COG5263,COG3942	N/A	N/A	N/A	N/A
KOfam	UHGV-1443221_51	K07726	43.9	0.0000000000043	K07726; putative transcriptional regulator	N/A
UniRef90	UHGV-1443221_51	UniRef90_A0A223ATJ2	94.4	2.82e-24	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1443221_51	888727.HMPREF9092_0491	75.5	1.42e-17	Helix-turn-helix	N/A
Pfam	UHGV-1443221_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1443221_51	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1443221_51	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1443221_52	PF03869,NF010256,COG4877	N/A	N/A	N/A	N/A