UHGV-1444003 (vOTU-100143)

Viral Genome: UHGV-1444003

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1444003
vOTU ID	vOTU-100143
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0224864
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	56.71 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9822
Virus hallmark genes (geNomad)	14
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	48.17
Jumbo phage	No

Genome content
Genome length (bp)	32,374
GC content	41.12%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	43
CDS density	95%
Average CDS length (bps)	718.40
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.71)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1444003_2	phrog_13141	171.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1444003_2	665950.HMPREF1025_02519	215.0	0	N/A	N/A
PHROG	UHGV-1444003_3	phrog_18725	57.9	2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1444003_3	742740.HMPREF9474_03517	76.6	5.04e-16	N/A	N/A
PHROG	UHGV-1444003_4	phrog_13879	288.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1444003_4	742740.HMPREF9474_03516	563.0	0	N/A	N/A
structural_annotation	UHGV-1444003_4	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_5	phrog_1194	48.9	0.0000000000001	N/A	unknown function
eggNOG-mapper	UHGV-1444003_5	585501.HMPREF6123_0824	78.2	7.77e-17	N/A	N/A
structural_annotation	UHGV-1444003_5	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_6	phrog_167	365.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1444003_6	UniRef90_UPI001D081BB8	1484.0	0	transglycosylase SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1444003_6	397290.C810_01419	465.0	0	Transglycosylase SLT domain	N/A
Pfam	UHGV-1444003_6	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1444003_6	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-1444003_8	phrog_36112	100.3	1.5e-29	N/A	unknown function
UniRef90	UHGV-1444003_8	UniRef90_A0A8D9PG71	118.0	5.83e-31	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-1444003_8	1298920.KI911353_gene2651	128.0	1.79e-35	N/A	N/A
structural_annotation	UHGV-1444003_8	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1444003_9	476272.RUMHYD_01968	172.0	0	N/A	N/A
structural_annotation	UHGV-1444003_9	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1444003_10	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_11	phrog_5	56.9	4e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-1444003_11	UniRef90_UPI001BBD4500	147.0	3.62936e-42	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1444003_11	397290.C810_01411	201.0	0	N/A	N/A
Pfam	UHGV-1444003_11	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1444003_11	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_13	phrog_1233	76.6	3.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-1444003_13	33035.JPJF01000106_gene3130	86.7	1.42e-20	N/A	N/A
structural_annotation	UHGV-1444003_13	PF13058	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1444003_14	1298920.KI911353_gene2656	81.6	7.74e-18	N/A	N/A
KOfam	UHGV-1444003_15	K07273	199.4	0	acm; lysozyme	N/A
PHROG	UHGV-1444003_15	phrog_291	153.8	1.4013e-45	endolysin	lysis
UniRef90	UHGV-1444003_15	UniRef90_A0A173YXL7	594.0	0	N-acetylmuramoyl-L-alanine amidase sle1	N/A
eggNOG-mapper	UHGV-1444003_15	556261.HMPREF0240_01272	269.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1444003_15	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1444003_15	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-1444003_15	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1444003_15	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1444003_15	PF01183,PF11623,COG3757,COG2139	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_16	phrog_443	55.6	0.0000000000000015	holin	lysis
UniRef90	UHGV-1444003_16	UniRef90_UPI001C3AE2A9	115.0	4.66e-32	Holin	N/A
eggNOG-mapper	UHGV-1444003_16	476272.RUMHYD_01759	81.6	1.55e-19	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1444003_16	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1444003_16	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_17	phrog_1863	82.5	2.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-1444003_17	1232453.BAIF02000059_gene1610	107.0	8.28e-30	N/A	N/A
eggNOG-mapper	UHGV-1444003_18	411461.DORFOR_01184	59.7	0.000000000177	N/A	N/A
structural_annotation	UHGV-1444003_18	PF07703,NF038114,COG5501	N/A	N/A	N/A	N/A
KOfam	UHGV-1444003_20	K13276	82.7	2e-24	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-1444003_20	phrog_11157	227.6	0	N/A	unknown function
UniRef90	UHGV-1444003_20	UniRef90_UPI0006C53CD4	478.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1444003_20	742765.HMPREF9457_03368	195.0	0	N/A	N/A
Pfam	UHGV-1444003_20	PF17957	N/A	N/A	Bacterial Ig domain	Big_7
Pfam	UHGV-1444003_20	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-1444003_20	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-1444003_20	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_22	phrog_30034	199.8	0	N/A	unknown function
UniRef90	UHGV-1444003_22	UniRef90_A0A3D1XGA4	127.0	1.81e-33	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1444003_22	665950.HMPREF1025_02518	142.0	1.90001e-40	N/A	N/A
PHROG	UHGV-1444003_23	phrog_2712	43.9	0.0000000000031	tail fiber protein	tail
eggNOG-mapper	UHGV-1444003_23	553973.CLOHYLEM_05669	59.3	0.0000000132	to Mitochondrial intermediate peptidase K01410	N/A
COG	UHGV-1444003_23	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
PHROG	UHGV-1444003_24	phrog_13141	416.2	0	N/A	unknown function
UniRef90	UHGV-1444003_24	UniRef90_A0A6L8RVX5	163.0	1.4013e-45	H_lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-1444003_24	411460.RUMTOR_02097	343.0	0	N/A	N/A
structural_annotation	UHGV-1444003_24	PF20747,PF17900	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_25	phrog_538	216.4	0	minor tail protein	tail
UniRef90	UHGV-1444003_25	UniRef90_UPI001F3E20C1	304.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1444003_25	742765.HMPREF9457_03374	318.0	0	N/A	N/A
Pfam	UHGV-1444003_25	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1444003_25	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1444003_26	742723.HMPREF9477_00896	188.0	0	N/A	N/A
structural_annotation	UHGV-1444003_26	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_27	phrog_1533	615.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1444003_27	UniRef90_A0A828SZM0	1604.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1444003_27	411468.CLOSCI_00278	859.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1444003_27	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1444003_27	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1444003_27	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1444003_27	PF10145,TIGR01760	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1444003_28	PF16462	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_29	phrog_2175	101.7	7e-30	protein with Ig domain	other
eggNOG-mapper	UHGV-1444003_29	411468.CLOSCI_00281	267.0	0	N/A	N/A
structural_annotation	UHGV-1444003_29	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1444003_30	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_31	phrog_5	63.3	5.5e-18	tail completion or Neck1 protein	connector
UniRef90	UHGV-1444003_31	UniRef90_UPI001C3BB077	218.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1444003_31	411468.CLOSCI_00283	166.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1444003_31	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1444003_31	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-1444003_32	UniRef90_A0A828SZY0	114.0	5.98e-32	Phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-1444003_32	411468.CLOSCI_00284	55.5	0.00000000279	N/A	N/A
PHROG	UHGV-1444003_34	phrog_132	55.8	7.6e-16	head-tail adaptor	connector
UniRef90	UHGV-1444003_34	UniRef90_UPI000C75BAD8	139.0	1.06e-40	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1444003_34	1123405.AUMM01000039_gene148	48.9	0.00000479	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1444003_34	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1444003_34	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_35	phrog_267	164.8	0	major head protein	head and packaging
UniRef90	UHGV-1444003_35	UniRef90_A0A7V8IA85	363.0	0	Phage coat protein gp6	N/A
eggNOG-mapper	UHGV-1444003_35	1321778.HMPREF1982_03550	309.0	0	P22 coat protein-protein 5 domain protein	N/A
Pfam	UHGV-1444003_35	PF19821	N/A	N/A	Phage capsid protein	Phage_capsid_2
structural_annotation	UHGV-1444003_35	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_36	phrog_194	130.4	1.4e-38	head scaffolding protein	head and packaging
UniRef90	UHGV-1444003_36	UniRef90_UPI000C76E206	298.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1444003_36	1209989.TepiRe1_1150	120.0	1.17e-31	Phage minor structural protein GP20	N/A
Pfam	UHGV-1444003_36	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1444003_36	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_39	phrog_4728	336.3	0	head morphogenesis	head and packaging
UniRef90	UHGV-1444003_39	UniRef90_A0A828SR54	836.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1444003_39	411468.CLOSCI_00291	323.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-1444003_39	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1444003_39	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1444003_39	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1444003_39	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1444003_40	phrog_64	384.7	0	portal protein	head and packaging
UniRef90	UHGV-1444003_40	UniRef90_A0A828SVT3	950.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1444003_40	1209989.TepiRe1_1145	501.0	0	phage portal protein, SPP1	N/A
Pfam	UHGV-1444003_40	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1444003_40	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1444003_40	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1444003_41	K06909	339.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1444003_41	phrog_3717	124.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1444003_41	UniRef90_A0A828SUY2	773.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1444003_41	610130.Closa_1390	647.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-1444003_41	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1444003_41	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1444003_41	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1444003_41	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1444003_41	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1444003_42	K07474	150.7	1.4013e-44	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1444003_42	phrog_51	149.1	1.96182e-44	terminase small subunit	head and packaging
UniRef90	UHGV-1444003_42	UniRef90_A0A1Y4RLJ9	229.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1444003_42	476272.RUMHYD_02844	224.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-1444003_42	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1444003_42	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1444003_42	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1444003_43	K06223	227.2	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1444003_43	phrog_56	201.4	0	DNA methyltransferase	other
UniRef90	UHGV-1444003_43	UniRef90_A0A828SZY9	494.0	0	Site-specific DNA-methyltransferase (adenine-specific)	N/A
eggNOG-mapper	UHGV-1444003_43	1232452.BAIB02000007_gene1633	409.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1444003_43	MTase_II_00039	158.0	0	Type II methyltransferase	RM
Pfam	UHGV-1444003_43	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-1444003_43	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-1444003_43	PF02086,MF_01872,TIGR00571,COG0338	N/A	N/A	N/A	N/A