UHGV-1445260 (vOTU-120434)

Viral Genome: UHGV-1445260

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1445260
vOTU ID	vOTU-120434
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0252160
Associated BioSample	SAMEA3951686
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	60.71 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.98
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	22.13
Jumbo phage	No

Genome content
Genome length (bp)	37,100
GC content	38.58%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	65
CDS density	89%
Average CDS length (bps)	505.34
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 60.71)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1445260_1	phrog_9700	76.3	3.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-1445260_1	476272.RUMHYD_01979	88.2	1.57e-17	N/A	N/A
eggNOG-mapper	UHGV-1445260_2	1304866.K413DRAFT_0769	57.8	0.0000000243	N/A	N/A
structural_annotation	UHGV-1445260_2	NF012201	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_3	phrog_18725	62.0	1.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1445260_3	1235800.C819_00473	86.3	1.12e-18	N/A	N/A
PHROG	UHGV-1445260_4	phrog_13879	56.5	1.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-1445260_4	1235800.C819_00474	179.0	0	N/A	N/A
structural_annotation	UHGV-1445260_4	PF21038,PF09096,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445260_5	PF07233,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_7	phrog_13879	286.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1445260_7	742740.HMPREF9474_03516	295.0	0	N/A	N/A
structural_annotation	UHGV-1445260_7	PF09097,PF06588,TIGR01665,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_8	phrog_1194	61.8	9.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-1445260_8	1298920.KI911353_gene4840	97.4	2.3e-24	N/A	N/A
structural_annotation	UHGV-1445260_8	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_9	phrog_1535	186.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1445260_9	UniRef90_A0A6N2TTW3	489.0	0	Transglycosylase SLT domain protein	N/A
eggNOG-mapper	UHGV-1445260_9	1211844.CBLM010000016_gene1482	218.0	0	tape measure	N/A
COG	UHGV-1445260_9	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
eggNOG-mapper	UHGV-1445260_12	476272.RUMHYD_01968	153.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1445260_12	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445260_13	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_14	phrog_5	42.7	0.000000000013	tail completion or Neck1 protein	connector
UniRef90	UHGV-1445260_14	UniRef90_UPI001BBD4500	134.0	7.11e-37	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1445260_14	397290.C810_01411	177.0	0	N/A	N/A
structural_annotation	UHGV-1445260_14	PF17395,TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445260_15	1298920.KI911353_gene2656	57.8	0.0000000118	N/A	N/A
structural_annotation	UHGV-1445260_15	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_16	phrog_18218	131.8	2.1e-39	N/A	unknown function
UniRef90	UHGV-1445260_16	UniRef90_A0A8D9PGR5	168.0	0	Holin	N/A
eggNOG-mapper	UHGV-1445260_16	411902.CLOBOL_03424	80.1	4.9e-18	N/A	N/A
structural_annotation	UHGV-1445260_16	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_17	phrog_1863	50.8	0.000000000000015	N/A	unknown function
eggNOG-mapper	UHGV-1445260_17	742741.HMPREF9475_00442	51.6	0.00000051	N/A	N/A
eggNOG-mapper	UHGV-1445260_18	397290.C810_01402	64.3	0.0000000000097	N/A	N/A
UniRef90	UHGV-1445260_19	UniRef90_A0A416G2T8	50.1	0.00000374	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-1445260_19	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_20	phrog_29	163.6	0	major head protein	head and packaging
UniRef90	UHGV-1445260_20	UniRef90_UPI001D02C54B	614.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1445260_20	1298920.KI911353_gene2660	335.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1445260_20	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1445260_20	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_21	phrog_909	54.9	0.0000000000000014	major head protein	head and packaging
eggNOG-mapper	UHGV-1445260_21	1298920.KI911353_gene2661	130.0	5.54e-38	N/A	N/A
UniRef90	UHGV-1445260_22	UniRef90_R6C0B6	209.0	0	Phage capsid scaffolding protein	N/A
Pfam	UHGV-1445260_23	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-1445260_23	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_25	phrog_17147	248.0	0	N/A	unknown function
UniRef90	UHGV-1445260_25	UniRef90_A0A374JQW7	426.0	0	N/A	N/A
eggNOG-mapper	UHGV-1445260_25	33035.JPJF01000043_gene1001	198.0	0	N/A	N/A
PHROG	UHGV-1445260_27	phrog_64	173.0	0	portal protein	head and packaging
UniRef90	UHGV-1445260_27	UniRef90_A0A416G2F2	704.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1445260_27	1298920.KI911353_gene2663	470.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1445260_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1445260_27	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1445260_28	K07273	159.1	0	acm; lysozyme	N/A
PHROG	UHGV-1445260_28	phrog_291	178.6	0	endolysin	lysis
UniRef90	UHGV-1445260_28	UniRef90_A0A1Q6MG54	548.0	0	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
eggNOG-mapper	UHGV-1445260_28	411474.COPEUT_02639	348.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1445260_28	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1445260_28	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1445260_28	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1445260_28	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_29	phrog_36	73.5	3.5e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-1445260_29	UniRef90_A0A352SH29	97.1	1.16e-23	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-1445260_29	97138.C820_00221	98.6	1.9e-24	sigma factor activity	N/A
COG	UHGV-1445260_29	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1445260_29	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_30	phrog_38	154.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1445260_30	UniRef90_A0A8D9PG33	681.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1445260_30	1232453.BAIF02000058_gene1623	431.0	0	TIGRFAM Phage	N/A
COG	UHGV-1445260_30	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445260_30	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-1445260_34	UniRef90_A0A8D9PGN8	63.5	0.0000000000159	Acetyl-coA carboxylase zinc finger domain protein	N/A
Pfam	UHGV-1445260_34	PF09706	N/A	N/A	CRISPR-associated protein (Cas_CXXC_CXXC)	Cas_CXXC_CXXC
PHROG	UHGV-1445260_36	phrog_25639	61.0	1.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-1445260_36	397290.C810_01381	52.8	0.000000029	N/A	N/A
UniRef90	UHGV-1445260_38	UniRef90_A0A3R6JTP4	91.7	2.01e-22	N/A	N/A
Pfam	UHGV-1445260_38	PF20037	N/A	N/A	N/A	DUF6440
structural_annotation	UHGV-1445260_38	PF20037	N/A	N/A	N/A	N/A
Pfam	UHGV-1445260_39	PF05225	N/A	N/A	helix-turn-helix, Psq domain	HTH_psq
structural_annotation	UHGV-1445260_39	PF05225,COG2886	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445260_40	411473.RUMCAL_02525	95.1	5.45e-24	N/A	N/A
PHROG	UHGV-1445260_43	phrog_229	105.4	5.6e-31	MazG-like pyrophosphatase	other
UniRef90	UHGV-1445260_43	UniRef90_R7BGE2	175.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-1445260_43	326427.Cagg_2585	94.0	2.77e-23	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1445260_43	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1445260_43	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1445260_43	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
UniRef90	UHGV-1445260_44	UniRef90_H1LV10	102.0	8.43e-27	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1445260_44	861454.HMPREF9099_01297	102.0	1.41e-27	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1445260_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1445260_44	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1445260_44	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445260_45	658655.HMPREF0988_00895	85.1	4.22e-18	N/A	N/A
UniRef90	UHGV-1445260_48	UniRef90_A0A3E4LX24	50.8	0.00000614	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1445260_49	1304866.K413DRAFT_4686	79.0	8.95e-19	N/A	N/A
KOfam	UHGV-1445260_50	K07727	54.3	0.0000000000000036	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-1445260_50	UniRef90_A0A3D5LSI5	136.0	1.20999e-40	Cro/Cl family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1445260_50	411470.RUMGNA_00075	95.9	3e-25	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1445260_50	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1445260_50	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_57	phrog_1233	57.3	2.9e-16	N/A	unknown function
UniRef90	UHGV-1445260_57	UniRef90_A0A345BPX6	82.0	4.26e-18	Metal-dependent hydrolase	N/A
eggNOG-mapper	UHGV-1445260_57	397290.C810_01336	117.0	7.92e-33	N/A	N/A
structural_annotation	UHGV-1445260_57	PF20352,COG2856	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445260_58	658655.HMPREF0988_00915	94.7	4.81e-21	N/A	N/A
PHROG	UHGV-1445260_59	phrog_20016	225.8	0	N/A	unknown function
UniRef90	UHGV-1445260_59	UniRef90_A0A285PT46	159.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1445260_59	397290.C810_05214	234.0	0	N/A	N/A
structural_annotation	UHGV-1445260_59	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1445260_60	phrog_16490	177.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1445260_60	397290.C810_01328	176.0	0	N/A	N/A
PHROG	UHGV-1445260_61	phrog_59	139.0	1.3999e-42	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1445260_61	UniRef90_UPI000705333A	150.0	1.07003e-41	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1445260_61	357276.EL88_11520	149.0	1.24015e-42	HNH endonuclease domain protein	N/A
PADLOC	UHGV-1445260_61	HEase_00016	86.2	1.4e-29	homing endonuclease	RM
Pfam	UHGV-1445260_61	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-1445260_61	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-1445260_61	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
structural_annotation	UHGV-1445260_61	PF07463,PF07453	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445260_62	658655.HMPREF0988_00918	88.6	2.85e-22	N/A	N/A
PHROG	UHGV-1445260_63	phrog_21718	47.2	0.0000000000003	N/A	unknown function
eggNOG-mapper	UHGV-1445260_63	658655.HMPREF0988_00919	96.3	9.12e-23	N/A	N/A
structural_annotation	UHGV-1445260_63	NF033819	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445260_65	1235790.C805_00057	68.9	0.00000000000000854	N/A	N/A
structural_annotation	UHGV-1445260_65	PF13404,TIGR01636	N/A	N/A	N/A	N/A