UHGV-1445411 (vOTU-074282)

Viral Genome: UHGV-1445411

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1445411
vOTU ID	vOTU-074282
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0291721
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	96.82 (High-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9781
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	28.25
Jumbo phage	No

Genome content
Genome length (bp)	44,675
GC content	45.88%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	79
CDS density	88%
Average CDS length (bps)	498.27
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.82)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1445411_2	phrog_21718	45.0	0.0000000000015	N/A	unknown function
eggNOG-mapper	UHGV-1445411_2	1235790.C805_00058	71.2	0.000000000000357	N/A	N/A
structural_annotation	UHGV-1445411_3	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-1445411_7	UniRef90_A0A316NUT2	53.5	0.000000187	Enolase	N/A
eggNOG-mapper	UHGV-1445411_7	1226322.HMPREF1545_00069	51.6	0.000000199	Phage holin family Hol44, in holin superfamily V	N/A
structural_annotation	UHGV-1445411_7	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_11	phrog_24267	71.4	1.4e-20	N/A	unknown function
UniRef90	UHGV-1445411_11	UniRef90_A0A431UL56	59.7	0.0000000179	Phage tail protein	N/A
eggNOG-mapper	UHGV-1445411_11	1035184.HMPREF1042_1210	77.4	0.0000000000000106	N/A	N/A
COG	UHGV-1445411_11	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1445411_11	COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_12	phrog_134	46.7	0.00000000000039	N/A	unknown function
UniRef90	UHGV-1445411_12	UniRef90_UPI0003A81066	47.0	0.00000765	XkdX family protein	N/A
Pfam	UHGV-1445411_12	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-1445411_12	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-1445411_12	PF09693,TIGR01669	N/A	N/A	N/A	N/A
KOfam	UHGV-1445411_15	K19304	54.8	0.0000000000000018	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-1445411_15	phrog_7767	45.5	0.00000000000068	metallo-endopeptidase	other
UniRef90	UHGV-1445411_15	UniRef90_A0A2V2FTH8	274.0	0	Peptidase M23	N/A
eggNOG-mapper	UHGV-1445411_15	665956.HMPREF1032_01628	240.0	0	N/A	N/A
Pfam	UHGV-1445411_15	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
structural_annotation	UHGV-1445411_15	PF01551,NF040883	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_17	phrog_18190	116.8	8.1e-35	N/A	unknown function
UniRef90	UHGV-1445411_17	UniRef90_UPI001D0767E1	110.0	9.76e-22	gp58-like family protein	N/A
eggNOG-mapper	UHGV-1445411_17	411471.SUBVAR_06932	278.0	0	N/A	N/A
structural_annotation	UHGV-1445411_17	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_18	phrog_1194	44.5	0.0000000000023	N/A	unknown function
eggNOG-mapper	UHGV-1445411_18	445972.ANACOL_01864	83.6	6.38e-19	N/A	N/A
structural_annotation	UHGV-1445411_18	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_19	phrog_1535	87.3	6.8e-40	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1445411_19	1294142.CINTURNW_1038	66.2	0.000000036	phage tail tape measure protein	N/A
COG	UHGV-1445411_19	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445411_19	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_22	phrog_158	63.2	5.6e-18	major tail protein	tail
UniRef90	UHGV-1445411_22	UniRef90_UPI001D06C8CA	99.8	3.36e-24	phage tail protein	N/A
eggNOG-mapper	UHGV-1445411_22	1140002.I570_01436	65.5	0.0000000000145	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-1445411_22	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445411_23	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445411_25	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445411_26	1280689.AUJC01000003_gene968	48.5	0.00000963	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1445411_26	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1445411_26	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_27	phrog_247	249.4	0	major head protein	head and packaging
UniRef90	UHGV-1445411_27	UniRef90_UPI001BA5448B	235.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1445411_27	33035.JPJF01000106_gene3132	272.0	0	N/A	N/A
Pfam	UHGV-1445411_27	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-1445411_27	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_29	phrog_64	181.0	0	portal protein	head and packaging
UniRef90	UHGV-1445411_29	UniRef90_UPI001D06C00B	377.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1445411_29	1121866.AUGK01000003_gene1429	327.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1445411_29	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1445411_29	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_31	phrog_38	174.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1445411_31	UniRef90_UPI00164E3A67	441.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1445411_31	1123263.AUKY01000015_gene1608	286.0	0	chromosome segregation	N/A
COG	UHGV-1445411_31	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445411_31	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1445411_32	445973.CLOBAR_02331	60.1	0.000000394	N/A	N/A
structural_annotation	UHGV-1445411_32	PF13463,MF_01909,NF040642,COG1846	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445411_33	PF19607	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445411_34	PF17613,COG2139	N/A	N/A	N/A	N/A
KOfam	UHGV-1445411_36	K01520	126.3	2.6e-37	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1445411_36	phrog_135	116.0	2.5e-34	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1445411_36	UniRef90_A0A6A2VG41	167.0	0	Deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
eggNOG-mapper	UHGV-1445411_36	1282887.AUJG01000016_gene1113	143.0	4.11996e-41	N/A	N/A
Pfam	UHGV-1445411_36	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1445411_36	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1445411_36	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1445411_36	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_37	phrog_236	53.1	0.0000000000000086	nucleotide kinase	other
UniRef90	UHGV-1445411_37	UniRef90_UPI001121EA63	54.7	0.00000228	N/A	N/A
eggNOG-mapper	UHGV-1445411_37	753084.F4YCQ0_9CAUD	63.2	0.000000000282	N/A	N/A
KOfam	UHGV-1445411_38	K03465	186.8	0	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-1445411_38	phrog_85	129.7	1.4e-38	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1445411_38	UniRef90_A0A2A7ALC5	231.0	0	Flavin-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1445411_38	657322.FPR_23400	214.0	0	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	N/A
Pfam	UHGV-1445411_38	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
NCBIFam	UHGV-1445411_38	TIGR02170.1	N/A	N/A	FAD-dependent thymidylate synthase	N/A
COG	UHGV-1445411_38	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
HAMAP	UHGV-1445411_38	MF_01408	N/A	N/A	Flavin-dependent thymidylate synthase [thyX]	N/A
structural_annotation	UHGV-1445411_38	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445411_46	PF21662,MF_00683,NF010673	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_48	phrog_1909	125.4	3.3e-37	N/A	unknown function
eggNOG-mapper	UHGV-1445411_48	211114.JOEF01000005_gene2052	56.6	0.00000198	N/A	N/A
structural_annotation	UHGV-1445411_48	TIGR01651,COG4547	N/A	N/A	N/A	N/A
KOfam	UHGV-1445411_49	K09882	119.7	2.5e-35	cobS; cobaltochelatase CobS [EC:6.6.1.2]	N/A
PHROG	UHGV-1445411_49	phrog_249	170.4	0	porphyrin biosynthesis	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1445411_49	UniRef90_UPI001373859D	271.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1445411_49	402612.FP2177	191.0	0	AAA domain (dynein-related subfamily)	N/A
Pfam	UHGV-1445411_49	PF07728	N/A	N/A	AAA domain (dynein-related subfamily)	AAA_5
COG	UHGV-1445411_49	COG0714	N/A	N/A	MoxR-like ATPase	N/A
structural_annotation	UHGV-1445411_49	PF07728,MF_03121,TIGR02640,COG0714	N/A	N/A	N/A	N/A
Pfam	UHGV-1445411_52	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
PHROG	UHGV-1445411_54	phrog_244	73.4	3.3e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1445411_54	UniRef90_A0A841R0Q1	101.0	2.46e-25	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1445411_54	1410650.JHWL01000003_gene2849	101.0	3.45e-26	N/A	N/A
KOfam	UHGV-1445411_56	K02314	191.2	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1445411_56	phrog_19	212.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1445411_56	UniRef90_A0A316NVS3	224.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1445411_56	1007096.BAGW01000033_gene1616	138.0	1.82e-33	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-1445411_56	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1445411_56	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1445411_56	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1445411_56	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445411_57	PF21076,MF_00707,NF001220,COG3830	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_60	phrog_16304	47.4	0.00000000000039	N/A	unknown function
eggNOG-mapper	UHGV-1445411_60	768706.Desor_0679	67.4	0.0000000000151	N/A	N/A
structural_annotation	UHGV-1445411_61	PF00436,MF_00984,NF005242,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_62	phrog_10048	59.9	1.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-1445411_62	1094508.Tsac_2442	128.0	1.83e-33	N/A	N/A
structural_annotation	UHGV-1445411_62	PF06420,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_63	phrog_3377	82.0	7.6e-24	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1445411_63	156889.Mmc1_2654	67.8	0.00000000000285	N/A	N/A
PHROG	UHGV-1445411_65	phrog_298	69.1	1.7e-20	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1445411_65	UniRef90_UPI001ABE80F6	94.0	3.01e-20	PD-(D/E)XK nuclease family protein	N/A
eggNOG-mapper	UHGV-1445411_65	1218075.BAYA01000003_gene606	77.0	0.0000000000000149	N/A	N/A
structural_annotation	UHGV-1445411_65	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_67	phrog_11947	50.2	0.000000000000036	N/A	unknown function
eggNOG-mapper	UHGV-1445411_67	272134.KB731324_gene2120	62.0	0.000000000299	N/A	N/A
PHROG	UHGV-1445411_69	phrog_24490	50.1	0.000000000000035	N/A	unknown function
eggNOG-mapper	UHGV-1445411_69	1392502.JNIO01000008_gene1300	72.0	0.00000000000000593	N/A	N/A
COG	UHGV-1445411_72	COG4226	N/A	N/A	Predicted nuclease of the RNAse H fold, HicB family	N/A
structural_annotation	UHGV-1445411_72	PF16225,TIGR04550,COG4226	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445411_76	PF04606,NF007241	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445411_77	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1445411_78	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1445411_79	phrog_16490	41.3	0.000000000025	N/A	unknown function