UHGV-1447413 (vOTU-077628)

Viral Genome: UHGV-1447413

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1447413
vOTU ID	vOTU-077628
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0320658
Associated BioSample	SAMEA2738135
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	94.39 (High-quality)
Trimmed provirus	No
CheckV viral markers	25
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9823
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	31.35
Jumbo phage	No

Genome content
Genome length (bp)	54,492
GC content	39.50%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	66
CDS density	98%
Average CDS length (bps)	807.23
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 94.39)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1447413_2	phrog_998	206.3	0	endolysin	lysis
UniRef90	UHGV-1447413_2	UniRef90_A0A4D6AB26	300.0	0	Lysin	N/A
eggNOG-mapper	UHGV-1447413_2	873448.STRPO_0302	277.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1447413_2	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
COG	UHGV-1447413_2	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1447413_2	PF05382,PF18341,NF033742,COG0791,COG4991	N/A	N/A	N/A	N/A
KOfam	UHGV-1447413_5	K19721	54.1	5.5e-16	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-1447413_5	phrog_21909	197.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1447413_5	999425.HMPREF9186_02055	192.0	0	N/A	N/A
Pfam	UHGV-1447413_5	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-1447413_6	phrog_1554	135.4	1.7e-40	N/A	unknown function
UniRef90	UHGV-1447413_6	UniRef90_A0A7X2X378	125.0	1.12e-32	N/A	N/A
eggNOG-mapper	UHGV-1447413_6	1035189.HMPREF9954_1920	103.0	6.34e-25	N/A	N/A
Pfam	UHGV-1447413_6	PF07104	N/A	N/A	N/A	DUF1366
structural_annotation	UHGV-1447413_6	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_8	phrog_1330	280.6	0	tail protein	tail
eggNOG-mapper	UHGV-1447413_8	1329250.WOSG25_220020	221.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1447413_8	PF07902	N/A	N/A	gp58-like protein	Gp58
NCBIFam	UHGV-1447413_8	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1447413_8	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1447413_8	PF14594,PF00629,PF10528,TIGR01665,NF033675,NF038393,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-1447413_9	UniRef90_A0A828QPE5	84.7	6.23e-16	Putative phage tail component domain protein	N/A
eggNOG-mapper	UHGV-1447413_9	1201292.DR75_1502	82.8	5.34e-16	phage tail	N/A
COG	UHGV-1447413_9	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1447413_9	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_10	phrog_4372	545.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1447413_10	742733.HMPREF9469_05020	315.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1447413_10	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1447413_10	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1447413_10	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1447413_11	phrog_5	45.5	0.0000000000019	tail completion or Neck1 protein	connector
UniRef90	UHGV-1447413_11	UniRef90_UPI000659DD5E	96.7	2.07e-23	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1447413_11	478749.BRYFOR_08514	84.0	3.36e-19	N/A	N/A
structural_annotation	UHGV-1447413_11	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_12	phrog_4338	133.7	8.4e-40	N/A	unknown function
eggNOG-mapper	UHGV-1447413_12	1537917.JU82_06570	75.9	0.0000000000000124	N/A	N/A
PHROG	UHGV-1447413_13	phrog_4282	120.4	1.4e-35	N/A	unknown function
eggNOG-mapper	UHGV-1447413_13	742733.HMPREF9469_05024	68.6	0.000000000000683	N/A	N/A
PHROG	UHGV-1447413_14	phrog_2645	308.6	0	major tail protein	tail
UniRef90	UHGV-1447413_14	UniRef90_A0A7X7CG90	237.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1447413_14	742740.HMPREF9474_02267	227.0	0	N/A	N/A
structural_annotation	UHGV-1447413_14	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1447413_15	478749.BRYFOR_08519	63.9	0.00000000000888	N/A	N/A
structural_annotation	UHGV-1447413_15	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_16	phrog_4270	90.1	1.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-1447413_16	742740.HMPREF9474_02268	82.0	1.33e-18	N/A	N/A
KOfam	UHGV-1447413_17	K06904	80.3	1.6e-23	N/A	N/A
PHROG	UHGV-1447413_17	phrog_3270	550.0	0	head maturation protease	head and packaging
UniRef90	UHGV-1447413_17	UniRef90_A0A6G5Y7H0	395.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1447413_17	1476888.X4YUP1_9CAUD	365.0	0	peptidase activity	N/A
Pfam	UHGV-1447413_17	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
structural_annotation	UHGV-1447413_17	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_18	phrog_12	111.4	4.4e-33	portal protein	head and packaging
UniRef90	UHGV-1447413_18	UniRef90_UPI001C27D37B	338.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1447413_18	665956.HMPREF1032_00674	328.0	0	Phage portal protein	N/A
Pfam	UHGV-1447413_18	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-1447413_18	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_19	phrog_9	255.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1447413_19	UniRef90_A0A5C7M263	772.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1447413_19	691965.D4P7C5_9CAUD	764.0	0	Phage Terminase	N/A
Pfam	UHGV-1447413_19	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1447413_19	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1447413_19	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_20	phrog_19428	58.0	1.8e-16	N/A	unknown function
PHROG	UHGV-1447413_21	phrog_4247	60.9	1.5e-17	virion structural protein	head and packaging
PHROG	UHGV-1447413_22	phrog_4321	144.4	3.19496e-43	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1447413_22	UniRef90_X4YEE5	134.0	6.16e-38	Homing endonuclease	N/A
eggNOG-mapper	UHGV-1447413_22	665956.HMPREF1032_00668	98.2	2.55e-24	N/A	N/A
PHROG	UHGV-1447413_23	phrog_4259	59.7	4.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-1447413_23	742733.HMPREF9469_05037	58.9	0.000000000902	N/A	N/A
PHROG	UHGV-1447413_24	phrog_6918	46.3	0.00000000000066	holin	lysis
Pfam	UHGV-1447413_24	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1447413_24	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_26	phrog_4303	70.2	2.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1447413_26	475178.B2BTP0_9CAUD	58.2	0.00000000179	N/A	N/A
PHROG	UHGV-1447413_27	phrog_4291	1011.4	0	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1447413_27	UniRef90_A0A1C5MZZ8	658.0	0	Transposase and inactivated derivatives, IS30 family	N/A
eggNOG-mapper	UHGV-1447413_27	742740.HMPREF9474_02278	608.0	0	N/A	N/A
Pfam	UHGV-1447413_27	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
Pfam	UHGV-1447413_27	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
Pfam	UHGV-1447413_27	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-1447413_27	PF05183	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_28	phrog_3953	160.4	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1447413_28	UniRef90_A0A514CXS9	179.0	0	Cas4 family exonuclease	N/A
eggNOG-mapper	UHGV-1447413_28	1476888.X4YEL4_9CAUD	164.0	0	N/A	N/A
structural_annotation	UHGV-1447413_28	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
UniRef90	UHGV-1447413_29	UniRef90_A0A5J6D7X3	84.3	3.19e-19	Hydrolase	N/A
eggNOG-mapper	UHGV-1447413_29	742740.HMPREF9474_02280	93.6	1.21e-23	N/A	N/A
structural_annotation	UHGV-1447413_29	PF01870,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_30	phrog_62	139.4	5.79997e-42	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1447413_30	UniRef90_A0A7X4ZP73	389.0	0	Helicase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1447413_30	665950.HMPREF1025_01961	387.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-1447413_30	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1447413_30	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_31	phrog_4787	93.9	6.4e-28	single strand annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1447413_31	UniRef90_D4P7U6	65.5	0.00000000059	Gp078	N/A
eggNOG-mapper	UHGV-1447413_31	411460.RUMTOR_01384	59.7	0.00000000721	N/A	N/A
structural_annotation	UHGV-1447413_31	PF21265,MF_04153	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_32	phrog_4210	1462.6	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1447413_32	UniRef90_A0A6G5Y767	1176.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-1447413_32	475178.B2BTL9_9CAUD	1152.0	0	nucleic acid binding	N/A
Pfam	UHGV-1447413_32	PF19263	N/A	N/A	N/A	DUF5906
structural_annotation	UHGV-1447413_32	PF00136,PF09250,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_37	phrog_1485	90.0	3.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-1447413_37	1225805.J7KDH9_9CAUD	96.7	1.87e-22	N/A	N/A
Pfam	UHGV-1447413_37	PF07659	N/A	N/A	Nucleotide modification associated domain 1	DUF1599
PHROG	UHGV-1447413_45	phrog_2152	96.3	3e-28	N/A	unknown function
Pfam	UHGV-1447413_45	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-1447413_45	PF19880,NF010306	N/A	N/A	N/A	N/A
PHROG	UHGV-1447413_50	phrog_4079	135.6	5.4e-40	N/A	unknown function
eggNOG-mapper	UHGV-1447413_50	665956.HMPREF1032_00637	76.6	0.000000000000019	N/A	N/A
UniRef90	UHGV-1447413_55	UniRef90_UPI0019125F71	209.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1447413_55	278197.PEPE_0128	103.0	1.35e-21	Collagen binding domain	N/A
Pfam	UHGV-1447413_55	PF17961	N/A	N/A	Bacterial Ig domain	Big_8
Pfam	UHGV-1447413_55	PF05737	N/A	N/A	Collagen binding domain	Collagen_bind
COG	UHGV-1447413_55	COG4932	N/A	N/A	Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold	N/A
eggNOG-mapper	UHGV-1447413_66	1321779.HMPREF1984_00237	162.0	0	N/A	N/A
COG	UHGV-1447413_66	COG0568	N/A	N/A	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	N/A