UHGV-1447531 (vOTU-098534)

Viral Genome: UHGV-1447531

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1447531
vOTU ID	vOTU-098534
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0201185
Associated BioSample	SAMEA2582145
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	71.55 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9817
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.16
Jumbo phage	No

Genome content
Genome length (bp)	28,180
GC content	42.36%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	35
CDS density	97%
Average CDS length (bps)	779.06
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 71.55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1447531_2	K01520	91.8	9.2e-27	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1447531_2	phrog_135	106.0	3.1e-31	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1447531_2	UniRef90_S4U059	155.0	1.4013e-45	dUTP diphosphatase-like protein	N/A
eggNOG-mapper	UHGV-1447531_2	246194.CHY_0300	133.0	6.45e-38	dUTP diphosphatase	N/A
Pfam	UHGV-1447531_2	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-1447531_2	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1447531_2	PF00692,MF_00116,NF010561,COG0756	N/A	N/A	N/A	N/A
KOfam	UHGV-1447531_3	K22300	41.4	0.000000000029	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1447531_3	phrog_1689	72.5	6.2e-21	nucleotide kinase	other
UniRef90	UHGV-1447531_3	UniRef90_UPI001106A61E	58.9	0.0000000958	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1447531_3	883112.HMPREF9707_01487	56.2	0.000000146	Helix-turn-helix	N/A
Pfam	UHGV-1447531_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1447531_3	PF11753	N/A	N/A	N/A	DUF3310
COG	UHGV-1447531_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-1447531_8	K19779	41.2	0.000000000028	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	N/A
PHROG	UHGV-1447531_8	phrog_599	55.1	0.0000000000000019	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-1447531_8	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1447531_8	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-1447531_8	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-1447531_8	NF007260	N/A	N/A	N/A	N/A
Pfam	UHGV-1447531_9	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
KOfam	UHGV-1447531_11	K03111	145.2	6.7963e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1447531_11	phrog_44	124.1	1.1e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1447531_11	UniRef90_A0A239Z9X8	191.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1447531_11	879309.HMPREF9199_0149	179.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1447531_11	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1447531_11	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1447531_11	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1447531_11	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1447531_11	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1447531_12	K01160	50.1	0.000000000000072	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1447531_12	phrog_140	107.5	1.2e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1447531_12	UniRef90_A0A1C6K6Q7	106.0	7.85e-27	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1447531_12	1211814.CAPG01000074_gene3465	94.4	6.15e-23	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1447531_12	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1447531_12	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1447531_12	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1447531_13	phrog_36	59.2	8.7e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1447531_13	UniRef90_A0A6N2ZMD2	70.5	0.000000000000994	Sigma-70, region 4	N/A
eggNOG-mapper	UHGV-1447531_13	706434.HMPREF9429_00383	68.2	0.0000000000013	N/A	N/A
structural_annotation	UHGV-1447531_13	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1447531_15	phrog_4102	60.0	5.1e-17	terminase small subunit	head and packaging
KOfam	UHGV-1447531_16	K06909	98.1	1.1e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1447531_16	phrog_2	163.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1447531_16	UniRef90_UPI001D00EC11	550.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-1447531_16	1401067.HMPREF0872_06820	841.0	0	Terminase-like family	N/A
Pfam	UHGV-1447531_16	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1447531_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1447531_16	PF03237,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-1447531_18	phrog_332	472.3	0	head-tail adaptor	connector
UniRef90	UHGV-1447531_18	UniRef90_A0A239Z979	606.0	0	Bacteriophage head to tail connecting protein	N/A
eggNOG-mapper	UHGV-1447531_18	1401067.HMPREF0872_06810	966.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-1447531_18	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-1447531_18	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1447531_19	phrog_528	78.8	3.3e-23	N/A	unknown function
UniRef90	UHGV-1447531_19	UniRef90_A0A8E8TUT9	59.3	0.00000000502	Endopeptidase	N/A
eggNOG-mapper	UHGV-1447531_19	1401067.HMPREF0872_06805	182.0	0	N/A	N/A
PHROG	UHGV-1447531_20	phrog_458	118.2	9e-35	protease	other
UniRef90	UHGV-1447531_20	UniRef90_UPI0019E883D9	85.9	4.28e-17	peptidase	N/A
eggNOG-mapper	UHGV-1447531_20	1401067.HMPREF0872_06800	272.0	0	N/A	N/A
PHROG	UHGV-1447531_21	phrog_212	181.8	0	major head protein	head and packaging
UniRef90	UHGV-1447531_21	UniRef90_A0A0B2JTD7	397.0	0	N/A	N/A
eggNOG-mapper	UHGV-1447531_21	1401067.HMPREF0872_06795	632.0	0	N/A	N/A
Pfam	UHGV-1447531_21	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-1447531_21	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1447531_22	PF21190	N/A	N/A	N/A	N/A
PHROG	UHGV-1447531_24	phrog_394	165.7	0	tail protein	tail
eggNOG-mapper	UHGV-1447531_24	1401067.HMPREF0872_06780	343.0	0	N/A	N/A
structural_annotation	UHGV-1447531_24	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-1447531_25	phrog_376	614.9	0	tail protein	tail
eggNOG-mapper	UHGV-1447531_25	1401067.HMPREF0872_06775	1217.0	0	N/A	N/A
structural_annotation	UHGV-1447531_25	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-1447531_26	phrog_308	82.9	4.2e-24	internal virion protein	head and packaging
structural_annotation	UHGV-1447531_26	PF11039,MF_02210,NF000165,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-1447531_27	phrog_418	52.9	0.0000000000000067	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1447531_27	1401067.HMPREF0872_06765	268.0	0	N/A	N/A
structural_annotation	UHGV-1447531_27	PF05384,TIGR01010,COG3524	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1447531_28	1401067.HMPREF0872_06760	76.3	0.00000000002	N/A	N/A
Pfam	UHGV-1447531_28	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
structural_annotation	UHGV-1447531_28	PF01464,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1447531_29	phrog_9880	308.6	0	N/A	unknown function
UniRef90	UHGV-1447531_29	UniRef90_A0A239Z8B8	1492.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1447531_29	699218.HMPREF0889_0277	485.0	0	N/A	N/A
Pfam	UHGV-1447531_29	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
eggNOG-mapper	UHGV-1447531_30	1401067.HMPREF0872_07835	167.0	3.46121e-43	N/A	N/A
structural_annotation	UHGV-1447531_30	PF03906,NF012201,COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-1447531_34	phrog_27828	147.4	3.36312e-44	N/A	unknown function
UniRef90	UHGV-1447531_34	UniRef90_F5KZP5	115.0	7.14e-31	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1447531_34	546273.VEIDISOL_00738	128.0	9.43e-37	N/A	N/A
KOfam	UHGV-1447531_35	K07273	86.1	5.5e-25	acm; lysozyme	N/A
PHROG	UHGV-1447531_35	phrog_291	64.5	2.1e-18	endolysin	lysis
UniRef90	UHGV-1447531_35	UniRef90_UPI001D073E26	242.0	0	glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-1447531_35	1273103.NM10_03031	72.8	0.000000000000106	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1447531_35	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1447531_35	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A