UHGV-1448031 (vOTU-029466)

Viral Genome: UHGV-1448031

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1448031
vOTU ID	vOTU-029466
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0200895
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	68.45 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9821
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	22.69
Jumbo phage	No

Genome content
Genome length (bp)	28,123
GC content	48.07%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	46
CDS density	96%
Average CDS length (bps)	587.22
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 68.45)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1448031_3	phrog_25554	43.5	0.0000000000052	N/A	unknown function
UniRef90	UHGV-1448031_4	UniRef90_A0A374PBQ3	99.0	2.65e-26	Trigger factor	N/A
eggNOG-mapper	UHGV-1448031_4	1298920.KI911353_gene4872	50.1	0.0000000977	N/A	N/A
UniRef90	UHGV-1448031_5	UniRef90_A0A374P9F4	133.0	8.7e-40	Phosphatase	N/A
structural_annotation	UHGV-1448031_5	PF11302,MF_00085,NF003076,COG0231	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_6	phrog_155	149.9	1.4013e-44	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1448031_6	UniRef90_UPI0011064CD2	311.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1448031_6	1298920.KI911353_gene4870	280.0	0	ERF superfamily	N/A
Pfam	UHGV-1448031_6	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1448031_6	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-1448031_7	K03111	134.0	1.7e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1448031_7	phrog_44	142.2	2.90069e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1448031_7	UniRef90_A0A0F0CNJ0	244.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1448031_7	1298920.KI911353_gene4869	196.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1448031_7	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1448031_7	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1448031_7	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1448031_7	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1448031_7	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_8	phrog_3490	147.1	8.54792e-44	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1448031_8	UniRef90_A0A2K2TWC1	313.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1448031_8	1298920.KI911353_gene4868	272.0	0	N/A	N/A
Pfam	UHGV-1448031_8	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-1448031_8	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-1448031_9	K02316	60.0	3.7e-17	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1448031_9	phrog_11992	158.6	0	N/A	unknown function
UniRef90	UHGV-1448031_9	UniRef90_D3ASX6	296.0	0	CHC2 zinc finger domain protein	N/A
eggNOG-mapper	UHGV-1448031_9	1304866.K413DRAFT_0824	229.0	0	CHC2 zinc finger	N/A
PADLOC	UHGV-1448031_9	drt-cluster192	45.5	0.0000000000016	DRT	DRT
Pfam	UHGV-1448031_9	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1448031_9	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1448031_9	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_10	phrog_8841	583.5	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1448031_10	UniRef90_A0A3E2U7B1	1062.0	0	N/A	N/A
eggNOG-mapper	UHGV-1448031_10	1298920.KI911353_gene4866	1066.0	0	N/A	N/A
Pfam	UHGV-1448031_10	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-1448031_10	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-1448031_10	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1448031_10	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1448031_12	MF_00773,NF041909,COG2075	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_13	phrog_15077	294.8	0	N/A	unknown function
UniRef90	UHGV-1448031_13	UniRef90_A0A1M6RQ18	176.0	9.80909e-45	RNA polymerase, alpha chain C terminal domain	N/A
eggNOG-mapper	UHGV-1448031_13	1298920.KI911353_gene4863	229.0	0	N/A	N/A
Pfam	UHGV-1448031_13	PF03118	N/A	N/A	Bacterial RNA polymerase, alpha chain C terminal domain	RNA_pol_A_CTD
structural_annotation	UHGV-1448031_13	NF038070	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1448031_17	1163671.JAGI01000002_gene1310	152.0	0	N/A	N/A
structural_annotation	UHGV-1448031_21	PF11331,TIGR02098	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1448031_22	PF21627	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1448031_24	PF07374,MF_00674,NF001074	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_28	phrog_606	63.7	3.1e-18	terminase small subunit	head and packaging
UniRef90	UHGV-1448031_28	UniRef90_UPI001D088AD3	210.0	0	DNA-packaging protein	N/A
Pfam	UHGV-1448031_28	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1448031_28	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1448031_29	K06909	78.3	1.2e-22	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1448031_29	phrog_10250	51.2	0.000000000000011	N/A	unknown function
UniRef90	UHGV-1448031_29	UniRef90_A0A174NEI6	879.0	0	Phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1448031_29	1298920.KI911353_gene4856	635.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-1448031_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1448031_29	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_30	phrog_533	279.1	0	portal protein	head and packaging
UniRef90	UHGV-1448031_30	UniRef90_A0A174NM20	971.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1448031_30	1117108.PAALTS15_13582	557.0	0	N/A	N/A
structural_annotation	UHGV-1448031_30	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_31	phrog_581	280.6	0	minor head protein	head and packaging
UniRef90	UHGV-1448031_31	UniRef90_A0A174NEA4	802.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1448031_31	1298920.KI911353_gene4854	486.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1448031_31	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1448031_31	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1448031_31	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_32	phrog_194	176.2	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1448031_32	UniRef90_A0A174NLQ6	413.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1448031_32	1151292.QEW_2434	140.0	4.49e-39	Phage minor structural protein GP20	N/A
Pfam	UHGV-1448031_32	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1448031_32	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_33	phrog_212	293.2	0	major head protein	head and packaging
UniRef90	UHGV-1448031_33	UniRef90_UPI001D004754	565.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1448031_33	1151292.QEW_2433	529.0	0	N/A	N/A
structural_annotation	UHGV-1448031_33	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_34	phrog_15682	70.2	2.5e-20	N/A	unknown function
UniRef90	UHGV-1448031_34	UniRef90_A0A841L8S8	77.0	8.47e-17	Rho_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1448031_34	1408823.AXUS01000024_gene2717	73.2	2.72e-16	N/A	N/A
PHROG	UHGV-1448031_35	phrog_541	70.5	2.4e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-1448031_35	483218.BACPEC_01153	157.0	0	N/A	N/A
PHROG	UHGV-1448031_36	phrog_8710	145.3	1.4013e-43	N/A	unknown function
eggNOG-mapper	UHGV-1448031_36	1304866.K413DRAFT_0782	188.0	0	N/A	N/A
structural_annotation	UHGV-1448031_36	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_37	phrog_556	69.4	4.7e-20	minor head protein	head and packaging
UniRef90	UHGV-1448031_37	UniRef90_UPI0003798593	144.0	3.38974e-42	minor capsid protein	N/A
eggNOG-mapper	UHGV-1448031_37	1298920.KI911353_gene4846	171.0	0	N/A	N/A
Pfam	UHGV-1448031_37	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
PHROG	UHGV-1448031_38	phrog_2595	98.1	6.8e-29	head-tail connector protein	connector
UniRef90	UHGV-1448031_38	UniRef90_UPI00045E84DA	213.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1448031_38	1298920.KI911353_gene4845	213.0	0	N/A	N/A
Pfam	UHGV-1448031_38	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1448031_38	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_39	phrog_820	119.6	1.8e-35	major tail protein	tail
eggNOG-mapper	UHGV-1448031_39	1298920.KI911353_gene4844	256.0	0	N/A	N/A
structural_annotation	UHGV-1448031_39	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_40	phrog_8300	106.3	1.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-1448031_40	1298920.KI911353_gene4843	109.0	1.87e-29	N/A	N/A
structural_annotation	UHGV-1448031_40	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_41	phrog_8355	113.2	6.4e-34	N/A	unknown function
UniRef90	UHGV-1448031_41	UniRef90_A0A174NJB8	181.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1448031_41	1298920.KI911353_gene4842	125.0	1.12e-36	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1448031_41	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1448031_41	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_42	phrog_1535	649.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1448031_42	UniRef90_A0A174NI32	1878.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-1448031_42	1298920.KI911353_gene4841	833.0	0	SLT domain	N/A
COG	UHGV-1448031_42	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1448031_43	phrog_1194	64.6	1.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1448031_43	742740.HMPREF9474_03515	200.0	0	N/A	N/A
structural_annotation	UHGV-1448031_43	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_44	phrog_13879	334.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1448031_44	742740.HMPREF9474_03516	589.0	0	N/A	N/A
structural_annotation	UHGV-1448031_44	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1448031_45	phrog_18725	71.8	7.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-1448031_45	585501.HMPREF6123_0822	128.0	1.84e-36	N/A	N/A
eggNOG-mapper	UHGV-1448031_46	585501.HMPREF6123_0821	61.2	0.0000000000825	N/A	N/A