UHGV-1449142 (vOTU-035242)

Viral Genome: UHGV-1449142

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1449142
vOTU ID	vOTU-035242
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0181472
Associated BioSample	SAMEA2338859
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	65.92 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.979
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	23.47
Jumbo phage	No

Genome content
Genome length (bp)	24,893
GC content	42.99%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	35
CDS density	94%
Average CDS length (bps)	664.97
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65.92)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1449142_1	phrog_9	233.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1449142_1	UniRef90_R7FEF5	610.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1449142_1	1211817.CCAT010000007_gene1040	381.0	0	Terminase	N/A
Pfam	UHGV-1449142_1	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1449142_1	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1449142_1	PF20441,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1449142_2	phrog_12	135.4	3.60001e-40	portal protein	head and packaging
UniRef90	UHGV-1449142_2	UniRef90_R6Z5U3	452.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1449142_2	457396.CSBG_01047	313.0	0	Portal protein	N/A
Pfam	UHGV-1449142_2	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1449142_2	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1449142_2	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1449142_3	K06904	120.2	2.2e-35	N/A	N/A
PHROG	UHGV-1449142_3	phrog_80	151.3	8.40779e-45	head maturation protease	head and packaging
UniRef90	UHGV-1449142_3	UniRef90_R6YQV2	256.0	0	Putative phage prohead protease	N/A
eggNOG-mapper	UHGV-1449142_3	927704.SELR_18200	199.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1449142_3	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1449142_3	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1449142_3	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1449142_3	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1449142_4	phrog_10	161.5	0	major head protein	head and packaging
UniRef90	UHGV-1449142_4	UniRef90_A0A417W9T2	427.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1449142_4	411470.RUMGNA_02065	413.0	0	N/A	N/A
Pfam	UHGV-1449142_4	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1449142_4	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1449142_4	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1449142_4	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449142_5	UniRef90_UPI001E432EFF	71.2	0.0000000000000231	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1449142_5	768704.Desmer_4461	54.3	0.0000000157	N/A	N/A
Pfam	UHGV-1449142_5	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1449142_5	PF05135,TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449142_6	UniRef90_R5WDX4	129.0	1.8e-36	Putative phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-1449142_6	1536774.H70357_10645	53.9	0.0000000958	N/A	N/A
Pfam	UHGV-1449142_6	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-1449142_6	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1449142_7	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1449142_8	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1449142_9	phrog_88	95.2	6.1e-28	major tail protein	tail
UniRef90	UHGV-1449142_9	UniRef90_A0A843GGC8	120.0	1.43e-29	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1449142_9	1120971.AUCA01000066_gene599	59.3	0.0000000355	Phage tail tube protein	N/A
NCBIFam	UHGV-1449142_9	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1449142_9	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
KOfam	UHGV-1449142_11	K20478	63.7	3e-20	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-1449142_11	phrog_5218	334.8	0	N/A	unknown function
UniRef90	UHGV-1449142_11	UniRef90_A0A415G8B3	466.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1449142_11	999413.HMPREF1094_02001	345.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-1449142_11	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-1449142_11	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1449142_11	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1449142_12	phrog_33	60.2	5.3e-17	distal tail protein Dit	tail
UniRef90	UHGV-1449142_12	UniRef90_UPI001D088A46	181.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1449142_12	665950.HMPREF1025_02008	120.0	1.34e-29	Phage tail protein	N/A
Pfam	UHGV-1449142_12	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-1449142_12	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1449142_12	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1449142_13	phrog_538	247.7	0	minor tail protein	tail
UniRef90	UHGV-1449142_13	UniRef90_A0A1I7FBJ0	174.0	0	Virus ReqiPepy6 Gp37-like protein	N/A
eggNOG-mapper	UHGV-1449142_13	428125.CLOLEP_01424	169.0	0	N/A	N/A
Pfam	UHGV-1449142_13	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1449142_13	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1449142_14	phrog_1220	127.4	4e-38	head protein	head and packaging
UniRef90	UHGV-1449142_14	UniRef90_R6SMG3	77.0	0.00000000000159	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1449142_14	1145276.T479_19910	74.3	0.00000000000216	N/A	N/A
KOfam	UHGV-1449142_17	K23779	61.3	2.4e-17	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-1449142_17	phrog_3	49.3	0.00000000000018	transcriptional repressor	transcription regulation
UniRef90	UHGV-1449142_17	UniRef90_B1HS16	55.1	0.0000000314	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1449142_17	410358.Mlab_0037	53.5	0.0000000213	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1449142_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1449142_17	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-1449142_19	K18830	65.7	8.9e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1449142_19	phrog_8	53.1	0.0000000000000051	transcriptional regulator	transcription regulation
UniRef90	UHGV-1449142_19	UniRef90_UPI001D06FE9D	150.0	1.54143e-44	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1449142_19	903814.ELI_1263	106.0	4.05e-28	Helix-turn-helix domain	N/A
Pfam	UHGV-1449142_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1449142_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1449142_19	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1449142_23	phrog_874	177.8	0	N/A	unknown function
UniRef90	UHGV-1449142_23	UniRef90_A0A6N7W7Q7	179.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1449142_23	411468.CLOSCI_00298	194.0	0	N/A	N/A
structural_annotation	UHGV-1449142_23	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
KOfam	UHGV-1449142_24	K03427	219.3	0	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-1449142_24	phrog_6380	373.1	0	DNA methyltransferase	other
UniRef90	UHGV-1449142_24	UniRef90_A0A417EL32	401.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-1449142_24	592010.GCWU000182_001448	377.0	0	HsdM N-terminal domain	N/A
PADLOC	UHGV-1449142_24	MTase_I_00005	250.1	0	Type I methyltransferase	RM
Pfam	UHGV-1449142_24	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-1449142_24	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-1449142_24	PF02384,MF_01872,TIGR00497,COG0286	N/A	N/A	N/A	N/A
KOfam	UHGV-1449142_25	K01154	51.7	0.000000000000011	hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]	N/A
PHROG	UHGV-1449142_25	phrog_2668	52.7	0.0000000000000052	N/A	unknown function
UniRef90	UHGV-1449142_25	UniRef90_UPI001923DEFA	99.4	1.33e-23	restriction endonuclease subunit S	N/A
eggNOG-mapper	UHGV-1449142_25	592010.GCWU000182_001449	90.5	3.39e-21	Type I restriction modification DNA specificity domain	N/A
PADLOC	UHGV-1449142_25	Specificity_I_00036	48.3	0.00000000000023	Type I specificity subunit	RM
Pfam	UHGV-1449142_25	PF01420	N/A	N/A	Type I restriction modification DNA specificity domain	Methylase_S
structural_annotation	UHGV-1449142_25	PF01420,COG0732	N/A	N/A	N/A	N/A
PHROG	UHGV-1449142_26	phrog_11237	48.8	3.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1449142_26	478749.BRYFOR_08581	64.7	0.0000000000167	N/A	N/A
PHROG	UHGV-1449142_29	phrog_3584	209.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1449142_29	642492.Clole_0725	183.0	0	N/A	N/A
structural_annotation	UHGV-1449142_29	PF21578,NF041486	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1449142_30	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449142_31	UniRef90_UPI0008BD6C31	86.7	1.18e-18	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-1449142_31	1235792.C808_00065	86.7	2.72e-19	N/A	N/A
PHROG	UHGV-1449142_32	phrog_8470	221.8	0	N/A	unknown function
UniRef90	UHGV-1449142_32	UniRef90_UPI0015E171DA	117.0	5.61e-25	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1449142_32	1235792.C808_03081	114.0	4.83e-24	PcfJ-like protein	N/A
Pfam	UHGV-1449142_32	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1449142_32	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1449142_33	phrog_7566	101.4	4.4e-30	N/A	unknown function
UniRef90	UHGV-1449142_33	UniRef90_A0A8D9UHC0	99.4	2.91e-25	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-1449142_33	411902.CLOBOL_05695	70.5	0.0000000000000139	N/A	N/A
PHROG	UHGV-1449142_35	phrog_15077	57.9	2.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-1449142_35	411902.CLOBOL_05696	64.3	0.0000000000627	N/A	N/A