UHGV-1449768 (vOTU-035249)

Viral Genome: UHGV-1449768

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1449768
vOTU ID	vOTU-035249
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0179837
Associated BioSample	SAMEA2042508
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	65 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9788
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.4
Jumbo phage	No

Genome content
Genome length (bp)	24,640
GC content	47.21%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	32
CDS density	93%
Average CDS length (bps)	715.88
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 65)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1449768_2	phrog_124	184.0	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1449768_2	UniRef90_UPI0009337475	320.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1449768_2	999413.HMPREF1094_00235	368.0	0	AAA domain	N/A
Pfam	UHGV-1449768_2	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1449768_2	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-1449768_3	K03546	59.4	4.5e-17	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1449768_3	phrog_1499	448.1	0	N/A	unknown function
UniRef90	UHGV-1449768_3	UniRef90_A0A396QCD6	526.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-1449768_3	1235798.C817_04766	515.0	0	AAA ATPase domain	N/A
Pfam	UHGV-1449768_3	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1449768_3	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
UniRef90	UHGV-1449768_8	UniRef90_A0A3B9SF96	60.8	0.000000000148	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1449768_8	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1449768_8	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449768_9	UniRef90_A0A6A8SH21	50.1	0.00000548	Helix-turn-helix domain-containing protein	N/A
KOfam	UHGV-1449768_12	K01448	98.8	6.3e-29	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1449768_12	phrog_435	116.3	2.4e-34	endolysin	lysis
UniRef90	UHGV-1449768_12	UniRef90_UPI0018AB36A8	256.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1449768_12	908340.HMPREF9406_2562	185.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1449768_12	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1449768_12	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1449768_12	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
PHROG	UHGV-1449768_13	phrog_199	67.1	2.1e-19	holin	lysis
UniRef90	UHGV-1449768_13	UniRef90_UPI001914E8AA	217.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1449768_13	908340.HMPREF9406_0810	217.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1449768_13	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1449768_13	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1449768_13	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449768_14	UniRef90_A6BEQ0	225.0	0	SGNH_hydro domain-containing protein	N/A
structural_annotation	UHGV-1449768_14	PF16255,NF007819,COG2845	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449768_15	411462.DORLON_00771	160.0	4.33001e-43	N/A	N/A
KOfam	UHGV-1449768_16	K24213	58.7	9e-17	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-1449768_16	phrog_6320	69.8	4.7e-20	tail fiber protein	tail
eggNOG-mapper	UHGV-1449768_16	411462.DORLON_00771	150.0	4.97e-38	N/A	N/A
Pfam	UHGV-1449768_16	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
eggNOG-mapper	UHGV-1449768_17	411462.DORLON_00772	56.2	0.00000000594	N/A	N/A
structural_annotation	UHGV-1449768_17	PF19714	N/A	N/A	N/A	N/A
PHROG	UHGV-1449768_18	phrog_5717	106.1	2.5e-31	tail protein	tail
UniRef90	UHGV-1449768_18	UniRef90_A2HAZ6	72.0	0.0000000000161	Tail fiber protein, putative	N/A
eggNOG-mapper	UHGV-1449768_18	658088.HMPREF0987_01104	115.0	1.22e-25	the current gene model (or a revised gene model) may contain a frame shift	N/A
COG	UHGV-1449768_18	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-1449768_19	phrog_1067	350.4	0	minor head protein	head and packaging
UniRef90	UHGV-1449768_19	UniRef90_UPI001D01FD0A	622.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1449768_19	1232446.BAIE02000002_gene836	584.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1449768_19	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1449768_19	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1449768_19	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1449768_19	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1449768_20	phrog_33	70.5	3.4e-20	distal tail protein Dit	tail
UniRef90	UHGV-1449768_20	UniRef90_A0A3R6C171	239.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1449768_20	999413.HMPREF1094_02000	234.0	0	phage tail	N/A
NCBIFam	UHGV-1449768_20	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1449768_20	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1449768_20	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1449768_21	phrog_23464	220.2	0	N/A	unknown function
UniRef90	UHGV-1449768_21	UniRef90_A0A1C6H5M9	315.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1449768_21	1232446.BAIE02000002_gene834	277.0	0	tape measure	N/A
COG	UHGV-1449768_21	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1449768_21	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1449768_22	phrog_709	76.0	1.3e-23	N/A	unknown function
UniRef90	UHGV-1449768_22	UniRef90_Q928G5	75.9	0.00000000000000192	Lin2570 protein	N/A
eggNOG-mapper	UHGV-1449768_22	272626.lin2570	75.9	3.23e-16	N/A	N/A
structural_annotation	UHGV-1449768_22	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1449768_23	phrog_88	116.2	2.5e-34	major tail protein	tail
UniRef90	UHGV-1449768_23	UniRef90_A0A3E3EG64	291.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1449768_23	1123263.AUKY01000027_gene840	149.0	4.4281e-43	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1449768_23	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1449768_23	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1449768_24	phrog_5	52.2	0.000000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-1449768_24	UniRef90_UPI000428028A	90.5	7.89e-21	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1449768_24	1226322.HMPREF1545_00119	97.4	2.27e-24	N/A	N/A
Pfam	UHGV-1449768_24	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1449768_24	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449768_25	UniRef90_Q0H234	73.6	0.0000000000000085	Aminopeptidase	N/A
eggNOG-mapper	UHGV-1449768_25	365048.Q0H234_9CAUD	73.6	0.00000000000000143	aminopeptidase activity	N/A
structural_annotation	UHGV-1449768_25	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449768_26	1235792.C808_00088	75.1	0.0000000000000011	N/A	N/A
structural_annotation	UHGV-1449768_26	PF16467,MF_01457,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1449768_27	phrog_749	65.5	6.5e-19	N/A	unknown function
UniRef90	UHGV-1449768_27	UniRef90_UPI0018CD5F53	52.0	0.00000185	phage head-tail connector protein	N/A
PHROG	UHGV-1449768_28	phrog_10	134.9	7.80001e-40	major head protein	head and packaging
UniRef90	UHGV-1449768_28	UniRef90_A0A3E3EGM4	530.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1449768_28	610130.Closa_0744	372.0	0	Phage capsid family	N/A
Pfam	UHGV-1449768_28	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1449768_28	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1449768_28	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1449768_28	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1449768_29	K01358	150.6	1.4013e-44	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1449768_29	phrog_94	230.4	0	head maturation protease	head and packaging
UniRef90	UHGV-1449768_29	UniRef90_A0A3E3EG77	328.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1449768_29	1232452.BAIB02000007_gene1626	210.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1449768_29	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1449768_29	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1449768_29	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1449768_30	phrog_12	146.2	1.79366e-43	portal protein	head and packaging
UniRef90	UHGV-1449768_30	UniRef90_A0A3E3EI59	503.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1449768_30	349161.Dred_2606	347.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1449768_30	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1449768_30	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1449768_30	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1449768_30	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1449768_31	phrog_9	238.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1449768_31	UniRef90_A0A3E3EH16	753.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1449768_31	610130.Closa_0741	642.0	0	Phage Terminase	N/A
Pfam	UHGV-1449768_31	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1449768_31	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1449768_31	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1449768_31	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1449768_32	phrog_5110	88.5	5e-26	terminase small subunit	head and packaging
UniRef90	UHGV-1449768_32	UniRef90_UPI001D06BD2A	71.2	0.00000000000012	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1449768_32	1405.DJ92_861	64.7	0.0000000000149	N/A	N/A
Pfam	UHGV-1449768_32	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1449768_32	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1449768_32	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A