UHGV-1450367 (vOTU-062916)

Viral Genome: UHGV-1450367

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1450367
vOTU ID	vOTU-062916
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0252289
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.9 (High-quality)
Trimmed provirus	No
CheckV viral markers	16
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9819
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	30.64
Jumbo phage	No

Genome content
Genome length (bp)	37,122
GC content	58.34%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	67
CDS density	93%
Average CDS length (bps)	513.94
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1450367_2	phrog_3377	44.8	0.00000000000045	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1450367_2	742767.HMPREF9456_02044	64.7	0.000000000275	N/A	N/A
eggNOG-mapper	UHGV-1450367_5	642492.Clole_0961	68.6	0.0000000000000216	N/A	N/A
structural_annotation	UHGV-1450367_5	PF12286	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450367_6	PF10548	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_7	phrog_1468	55.7	2.7e-16	transcriptional repressor	transcription regulation
UniRef90	UHGV-1450367_7	UniRef90_A0A1Y3RFS1	58.5	0.00000000437	XRE family transcriptional regulator	N/A
structural_annotation	UHGV-1450367_8	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450367_9	PF05082	N/A	N/A	N/A	N/A
KOfam	UHGV-1450367_13	K00390	99.0	4.7e-29	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1450367_13	phrog_424	121.9	4.5e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1450367_13	UniRef90_A0A3D3Y454	401.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-1450367_13	1408437.JNJN01000032_gene2312	346.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1450367_13	BrxP_00001	70.4	1.7e-20	BrxP	BREX
Pfam	UHGV-1450367_13	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1450367_13	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1450367_13	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-1450367_14	UniRef90_A0A845MZZ9	100.0	5.77e-25	N/A	N/A
Pfam	UHGV-1450367_14	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1450367_14	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_15	phrog_3136	129.9	6e-39	N/A	unknown function
UniRef90	UHGV-1450367_15	UniRef90_UPI001C00EDA4	122.0	6.33e-32	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1450367_15	1007096.BAGW01000031_gene120	55.8	0.0000009	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-1450367_15	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-1450367_15	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1450367_15	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_20	phrog_190	109.6	2.6e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1450367_20	UniRef90_UPI0006C2AC63	129.0	2.29e-35	N/A	N/A
eggNOG-mapper	UHGV-1450367_20	1226322.HMPREF1545_00295	115.0	1.62e-30	N/A	N/A
Pfam	UHGV-1450367_20	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1450367_20	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_22	phrog_374	56.6	5.5e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1450367_22	1423807.BACO01000037_gene1103	68.2	0.00000000000166	N/A	N/A
structural_annotation	UHGV-1450367_27	PF08271	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_28	phrog_9467	176.0	0	N/A	unknown function
UniRef90	UHGV-1450367_28	UniRef90_UPI0015B3EAA7	136.0	1.96e-38	Gp49 family protein	N/A
eggNOG-mapper	UHGV-1450367_28	1519439.JPJG01000060_gene1880	181.0	0	N/A	N/A
Pfam	UHGV-1450367_28	PF13876	N/A	N/A	N/A	Phage_gp49_66
dbAPIS	UHGV-1450367_28	APIS043	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450367_28	PF13876	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_29	phrog_3584	111.7	5.9e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1450367_29	537013.CLOSTMETH_02141	69.3	0.0000000000125	N/A	N/A
structural_annotation	UHGV-1450367_29	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1450367_30	1297617.JPJD01000059_gene2640	84.7	3.61e-19	N/A	N/A
structural_annotation	UHGV-1450367_30	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_31	phrog_119	49.4	0.000000000000059	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1450367_31	UniRef90_A0A174XSZ8	126.0	2.05e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1450367_31	1235793.C809_01915	120.0	1.22e-33	HNH endonuclease	N/A
COG	UHGV-1450367_31	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1450367_32	phrog_1066	129.1	1.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-1450367_32	1341151.ASZU01000004_gene265	124.0	3.27e-35	N/A	N/A
structural_annotation	UHGV-1450367_32	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_33	phrog_9	376.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1450367_33	UniRef90_A0A1Y3W5R1	783.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1450367_33	1203606.HMPREF1526_00981	728.0	0	Terminase	N/A
Pfam	UHGV-1450367_33	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1450367_33	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1450367_33	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1450367_33	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_34	phrog_12	176.8	0	portal protein	head and packaging
UniRef90	UHGV-1450367_34	UniRef90_C4GAS6	502.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1450367_34	626523.GCWU000342_01027	502.0	0	Portal protein	N/A
Pfam	UHGV-1450367_34	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1450367_34	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1450367_34	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1450367_35	K01358	133.2	2.9e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1450367_35	phrog_94	201.9	0	head maturation protease	head and packaging
UniRef90	UHGV-1450367_35	UniRef90_R9TLM7	205.0	0	Peptidase S14 ClpP	N/A
eggNOG-mapper	UHGV-1450367_35	1280689.AUJC01000011_gene1520	187.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1450367_35	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1450367_35	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1450367_35	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_36	phrog_10	179.4	0	major head protein	head and packaging
UniRef90	UHGV-1450367_36	UniRef90_UPI00189AE5FE	417.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1450367_36	1280689.AUJC01000011_gene1521	390.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1450367_36	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1450367_36	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1450367_36	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1450367_36	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_37	phrog_5223	42.9	0.0000000000063	neck protein	connector
UniRef90	UHGV-1450367_37	UniRef90_UPI000BEC4770	53.1	0.000000424	head-tail connector protein	N/A
PHROG	UHGV-1450367_38	phrog_1951	73.9	1.5e-21	head-tail adaptor	connector
UniRef90	UHGV-1450367_38	UniRef90_A0A1F8UNT5	63.5	0.0000000000494	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1450367_38	1094508.Tsac_2422	51.6	0.000000448	Phage head-tail joining protein	N/A
Pfam	UHGV-1450367_38	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1450367_38	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1450367_38	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1450367_38	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1450367_39	1487921.DP68_11350	54.7	0.0000000349	N/A	N/A
structural_annotation	UHGV-1450367_39	PF05657	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450367_40	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_41	phrog_88	85.6	6e-25	major tail protein	tail
UniRef90	UHGV-1450367_41	UniRef90_S0FUN2	118.0	2.99e-30	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1450367_41	1195236.CTER_5106	118.0	5.02e-31	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1450367_41	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1450367_41	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450367_41	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450367_42	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_43	phrog_33680	143.2	8.70206e-43	N/A	unknown function
UniRef90	UHGV-1450367_43	UniRef90_A0A1M6L1P7	265.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1450367_43	498761.HM1_2969	251.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1450367_43	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1450367_43	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_44	phrog_37549	84.8	4.1e-28	virion structural protein	head and packaging
UniRef90	UHGV-1450367_44	UniRef90_A0A3D0W045	230.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1450367_44	1195236.CTER_5103	129.0	2.39e-28	N/A	N/A
structural_annotation	UHGV-1450367_44	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_45	phrog_26795	127.3	2.9e-38	N/A	unknown function
UniRef90	UHGV-1450367_45	UniRef90_A0A5J6T4K8	132.0	1.12e-31	Minor tail protein	N/A
eggNOG-mapper	UHGV-1450367_45	1382315.JPOI01000001_gene271	135.0	1.22e-33	N/A	N/A
structural_annotation	UHGV-1450367_45	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450367_46	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450367_47	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_49	phrog_10898	285.8	0	N/A	unknown function
UniRef90	UHGV-1450367_49	UniRef90_A0A7U3NJT3	189.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1450367_49	717606.PaecuDRAFT_2136	72.4	0.00000000000744	S-layer homology domain	N/A
COG	UHGV-1450367_49	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-1450367_49	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450367_50	PF16408,NF033510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1450367_51	1519439.JPJG01000060_gene1892	52.0	0.00000228	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1450367_51	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-1450367_52	phrog_10993	62.0	7.4e-18	Hoc-like head decoration	head and packaging
UniRef90	UHGV-1450367_52	UniRef90_UPI000834AF98	102.0	7.56e-22	N/A	N/A
eggNOG-mapper	UHGV-1450367_52	742738.HMPREF9460_02534	62.4	0.0000000281	N/A	N/A
Pfam	UHGV-1450367_52	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1450367_52	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1450367_54	1519439.JPJG01000060_gene1895	83.6	6.96e-16	N/A	N/A
structural_annotation	UHGV-1450367_54	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_57	phrog_6918	95.6	3.2e-28	holin	lysis
UniRef90	UHGV-1450367_57	UniRef90_A0A316QCY7	103.0	1.73e-26	Holin	N/A
eggNOG-mapper	UHGV-1450367_57	1297617.JPJD01000020_gene301	101.0	1.21e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1450367_57	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1450367_57	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-1450367_58	UniRef90_UPI00164EA432	221.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1450367_58	525254.HMPREF0072_1273	216.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-1450367_58	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1450367_58	NF033743	N/A	N/A	N/A	N/A
UniRef90	UHGV-1450367_62	UniRef90_A0A8F0WD75	79.0	0.00000000000000282	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1450367_62	1378168.N510_03079	72.0	0.000000000000557	N/A	N/A
KOfam	UHGV-1450367_63	K06400	246.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1450367_63	phrog_95	264.5	0	integrase	integration and excision
UniRef90	UHGV-1450367_63	UniRef90_G9YSD9	414.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-1450367_63	1408437.JNJN01000002_gene1420	406.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1450367_63	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1450367_63	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1450367_63	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1450367_63	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1450367_63	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-1450367_64	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1450367_64	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1450367_64	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1450367_65	phrog_10292	78.1	4.7e-23	N/A	unknown function
UniRef90	UHGV-1450367_65	UniRef90_A0A416W984	105.0	2.15e-26	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1450367_65	1519439.JPJG01000059_gene1953	82.4	1.14e-17	TM2 domain	N/A
Pfam	UHGV-1450367_65	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1450367_65	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1450367_65	COG2314	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1450367_66	552398.HMPREF0866_02158	53.9	0.00000342	NOG18738 non supervised orthologous group	N/A
COG	UHGV-1450367_66	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-1450367_66	PF02805	N/A	N/A	N/A	N/A