UHGV-1450732 (vOTU-122118)

Viral Genome: UHGV-1450732

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-1450732
vOTU ID	vOTU-122118
Representative Genome?	Yes
Source	MGV
Original genome ID	MGV-GENOME-0193785
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	67.6 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9802
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	58.08
Jumbo phage	No

Genome content
Genome length (bp)	26,886
GC content	40.62%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	38
CDS density	92%
Average CDS length (bps)	650.37
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 67.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1450732_1	phrog_3399	98.5	4.4e-29	N/A	unknown function
PHROG	UHGV-1450732_2	phrog_1529	87.5	2.2e-25	N/A	unknown function
UniRef90	UHGV-1450732_2	UniRef90_UPI001960B4B3	87.4	1.68e-21	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1450732_2	999425.HMPREF9186_01940	90.5	1.49e-23	N/A	N/A
structural_annotation	UHGV-1450732_2	PF01381,NF040507,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_3	phrog_6487	148.3	9.80909e-45	N/A	unknown function
UniRef90	UHGV-1450732_3	UniRef90_A0A359YI00	236.0	0	N/A	N/A
eggNOG-mapper	UHGV-1450732_3	999425.HMPREF9186_02053	151.0	8.57595e-43	N/A	N/A
structural_annotation	UHGV-1450732_3	PF05587,NF040788,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_4	phrog_1309	268.3	0	endolysin	lysis
UniRef90	UHGV-1450732_4	UniRef90_UPI001BE8F071	474.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1450732_4	1316408.HSISM1_1251	452.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1450732_4	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1450732_4	PF08460	N/A	N/A	Bacterial SH3 domain	SH3_5
COG	UHGV-1450732_4	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1450732_4	PF08460,PF05257,NF041850,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_5	phrog_297	75.3	9.2e-22	holin	lysis
UniRef90	UHGV-1450732_5	UniRef90_UPI000BE376CF	157.0	0	phage holin	N/A
eggNOG-mapper	UHGV-1450732_5	999425.HMPREF9186_02051	153.0	0	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1450732_5	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1450732_5	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1450732_5	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1450732_5	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_6	phrog_4257	160.7	0	N/A	unknown function
UniRef90	UHGV-1450732_6	UniRef90_A0A1L2JYP2	210.0	0	Transcription termination factor	N/A
eggNOG-mapper	UHGV-1450732_6	1035189.HMPREF9954_0324	203.0	0	N/A	N/A
PHROG	UHGV-1450732_7	phrog_1554	212.0	0	N/A	unknown function
UniRef90	UHGV-1450732_7	UniRef90_A0A359YI08	152.0	6.1517e-43	N/A	N/A
eggNOG-mapper	UHGV-1450732_7	1005705.HMPREF9967_1055	297.0	0	N/A	N/A
structural_annotation	UHGV-1450732_7	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_9	phrog_2270	288.3	0	N/A	unknown function
UniRef90	UHGV-1450732_9	UniRef90_A0A1F0ZPD4	1461.0	0	Gp58 domain-containing protein	N/A
eggNOG-mapper	UHGV-1450732_9	537874.B3GW15_9CAUD	967.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1450732_9	PF07902	N/A	N/A	gp58-like protein	Gp58
NCBIFam	UHGV-1450732_9	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1450732_9	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_10	phrog_33	75.3	1.3e-21	distal tail protein Dit	tail
UniRef90	UHGV-1450732_10	UniRef90_UPI0018982A9B	471.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1450732_10	537874.B3GW14_9CAUD	278.0	0	Phage tail protein	N/A
Pfam	UHGV-1450732_10	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1450732_10	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-1450732_10	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_11	phrog_1293	1142.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1450732_11	UniRef90_UPI001896B40F	1787.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1450732_11	999425.HMPREF9186_02045	1196.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-1450732_11	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1450732_11	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1450732_11	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1450732_11	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_12	phrog_6190	73.3	2.4e-21	N/A	unknown function
UniRef90	UHGV-1450732_12	UniRef90_A0A239WZJ5	58.9	0.000000000129	N/A	N/A
PHROG	UHGV-1450732_13	phrog_187	43.3	0.000000000006	head-tail adaptor	connector
UniRef90	UHGV-1450732_13	UniRef90_A0A116MET7	125.0	3.85e-35	N/A	N/A
structural_annotation	UHGV-1450732_13	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_14	phrog_88	148.5	3.50325e-44	major tail protein	tail
UniRef90	UHGV-1450732_14	UniRef90_UPI001BDB41CF	361.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1450732_14	764299.STRIC_0108	256.0	0	Phage tail tube protein	N/A
Pfam	UHGV-1450732_14	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-1450732_14	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1450732_14	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_15	phrog_78	97.3	1.3e-28	tail terminator	connector
UniRef90	UHGV-1450732_15	UniRef90_W1TYT9	195.0	0	N/A	N/A
eggNOG-mapper	UHGV-1450732_15	1123309.AQYB01000019_gene899	199.0	0	N/A	N/A
structural_annotation	UHGV-1450732_15	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_16	phrog_5	43.7	0.0000000000068	tail completion or Neck1 protein	connector
UniRef90	UHGV-1450732_16	UniRef90_UPI00066114D3	194.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1450732_16	1154860.SAG0136_08110	157.0	0	N/A	N/A
Pfam	UHGV-1450732_16	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1450732_16	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1450732_16	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_17	phrog_25	56.7	2.9e-16	head closure Hc1	connector
UniRef90	UHGV-1450732_17	UniRef90_UPI001BD9C68B	236.0	0	head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-1450732_17	1154860.SAG0136_08105	116.0	3.14e-32	Phage head-tail joining protein	N/A
Pfam	UHGV-1450732_17	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-1450732_17	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_18	phrog_40	61.6	9.9e-18	head-tail adaptor Ad1	connector
UniRef90	UHGV-1450732_18	UniRef90_UPI00189BB7BE	211.0	0	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1450732_18	1225805.J7KDJ3_9CAUD	128.0	2.88e-37	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1450732_18	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-1450732_18	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1450732_18	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_19	phrog_10	193.7	0	major head protein	head and packaging
UniRef90	UHGV-1450732_19	UniRef90_UPI001BDA9019	702.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1450732_19	764299.STRIC_0102	448.0	0	capsid protein	N/A
Pfam	UHGV-1450732_19	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1450732_19	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1450732_19	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1450732_19	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1450732_20	K01358	133.9	1.6e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1450732_20	phrog_94	213.1	0	head maturation protease	head and packaging
UniRef90	UHGV-1450732_20	UniRef90_A0A428GXI4	390.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1450732_20	1123309.AQYB01000019_gene894	357.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1450732_20	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1450732_20	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1450732_20	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_21	phrog_12	218.1	0	portal protein	head and packaging
UniRef90	UHGV-1450732_21	UniRef90_UPI00189920CB	786.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1450732_21	1403946.Q615_SPAC00127G0138	647.0	0	Phage portal protein	N/A
Pfam	UHGV-1450732_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1450732_21	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1450732_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1450732_21	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_23	phrog_9	383.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1450732_23	UniRef90_UPI00189AC00E	1124.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1450732_23	1154860.SAG0136_08065	909.0	0	Terminase	N/A
Pfam	UHGV-1450732_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1450732_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1450732_23	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1450732_23	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_24	phrog_83	126.3	1.8e-37	terminase small subunit	head and packaging
UniRef90	UHGV-1450732_24	UniRef90_UPI0018998147	298.0	0	phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-1450732_24	1403946.Q615_SPAC00127G0142	196.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1450732_24	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-1450732_24	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
COG	UHGV-1450732_24	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1450732_24	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_25	phrog_144	73.8	2.7e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1450732_25	UniRef90_UPI00158AB17A	214.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1450732_25	1314.HKU360_01230	130.0	3.98e-38	HNH nucleases	N/A
Pfam	UHGV-1450732_25	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1450732_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1450732_25	PF05766	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_26	phrog_36	85.7	5.9e-25	transcriptional regulator	transcription regulation
UniRef90	UHGV-1450732_26	UniRef90_UPI00158E126B	259.0	0	N/A	N/A
eggNOG-mapper	UHGV-1450732_26	936580.HMPREF1516_0728	110.0	2.62e-29	sigma factor activity	N/A
Pfam	UHGV-1450732_26	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1450732_26	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1450732_26	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_30	phrog_121	147.1	7.70714e-44	N/A	unknown function
UniRef90	UHGV-1450732_30	UniRef90_A0A414PKF4	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-1450732_30	768726.HMPREF9178_1077	139.0	1.69e-39	N/A	N/A
Pfam	UHGV-1450732_30	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1450732_30	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-1450732_31	phrog_7711	137.8	3.80004e-41	N/A	unknown function
UniRef90	UHGV-1450732_31	UniRef90_A0A0N7JDH6	134.0	3.74e-38	N/A	N/A
eggNOG-mapper	UHGV-1450732_31	1282664.H354_07595	218.0	0	N/A	N/A
KOfam	UHGV-1450732_32	K00571	99.9	3.1e-29	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1450732_32	phrog_23224	231.6	0	DNA methyltransferase	other
UniRef90	UHGV-1450732_32	UniRef90_A0A428F068	464.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1450732_32	1214217.ALNF01000014_gene1390	377.0	0	N-4 methylation of cytosine	N/A
PADLOC	UHGV-1450732_32	MTase_II_00172	93.8	4e-29	Type II methyltransferase	RM
Pfam	UHGV-1450732_32	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1450732_32	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1450732_32	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
UniRef90	UHGV-1450732_33	UniRef90_UPI001969AC6C	51.2	0.000000578	N/A	N/A
eggNOG-mapper	UHGV-1450732_33	585203.SMSK564_1299	60.5	0.000000000235	N/A	N/A
PHROG	UHGV-1450732_34	phrog_121	86.7	2.2e-25	N/A	unknown function
UniRef90	UHGV-1450732_34	UniRef90_UPI00189F72FF	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-1450732_34	1300150.EMQU_2281	58.5	0.0000000107	N/A	N/A
Pfam	UHGV-1450732_34	PF07852	N/A	N/A	N/A	DUF1642
PHROG	UHGV-1450732_35	phrog_1691	125.6	1.4e-37	N/A	unknown function
eggNOG-mapper	UHGV-1450732_35	226185.EF_0327	65.9	0.00000000000113	N/A	N/A
PHROG	UHGV-1450732_36	phrog_1992	167.5	0	MazG-like pyrophosphatase	other
UniRef90	UHGV-1450732_36	UniRef90_A0A6I3PU23	321.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1450732_36	999425.HMPREF9186_02016	276.0	0	Mazg nucleotide pyrophosphohydrolase	N/A
COG	UHGV-1450732_36	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1450732_36	PF08761,COG4508	N/A	N/A	N/A	N/A